EY692403

Overview
NameEY692403
Unique NameEY692403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length496
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8853 contig Csv1_Contig8853:1..495. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.094e-23
Identity = 49/59 (83.05%), Postives = 53/59 (89.83%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKMQ 178
            TAFGGFKSR+QVPWLVDKYMKKEIKVDEYITHNM L +IN+AFH +H G CLRCVL MQ
Sbjct:  322 TAFGGFKSRTQVPWLVDKYMKKEIKVDEYITHNMNLADINDAFHLLHEGGCLRCVLAMQ 380          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 8.797e-22
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKMQE 181
            TAFGGFKSRSQVPWLV+KY+KKEIKVDEYITHN+TL EIN+AF  +H G CLRCVL + +
Sbjct:  319 TAFGGFKSRSQVPWLVEKYLKKEIKVDEYITHNLTLLEINKAFDLLHEGQCLRCVLAVHD 378          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 7.447e-21
Identity = 45/56 (80.36%), Postives = 50/56 (89.29%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVL 169
            TAFGGFKSR+QVPWLV+KYM KEIKVDEYITHN+TL EIN+AF  +H G CLRCVL
Sbjct:  320 TAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCLRCVL 375          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVL 169
            TAFGGFKSRSQVPWLV+KY+ KEIKVDEY+TH+M L +IN+AF  +H G CLRCVL
Sbjct:  322 TAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 1.405e-19
Identity = 42/56 (75.00%), Postives = 49/56 (87.50%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVL 169
            TAFGGFKSRSQVPWLV+KY+ KEIKVDEY+TH+M L +IN+AF  +H G CLRCVL
Sbjct:  322 TAFGGFKSRSQVPWLVEKYLNKEIKVDEYVTHSMNLTDINKAFDLLHEGGCLRCVL 377          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 3.958e-14
Identity = 35/58 (60.34%), Postives = 44/58 (75.86%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKM 175
            T FGG+K +S +P L+DKYM KEI +DE+ITHN++  EIN+AF  M  G CLRCVL M
Sbjct:  322 TLFGGWKPKSDLPSLIDKYMNKEIMIDEFITHNLSFDEINKAFVLMREGKCLRCVLHM 379          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 9.749e-13
Identity = 34/58 (58.62%), Postives = 44/58 (75.86%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKM 175
            TAFGG+KS   VP LV +YM K+IKVDE++T N++  +IN+AF  MH GD +R VLKM
Sbjct:  317 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTGNLSFDQINQAFDLMHSGDSIRTVLKM 374          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_HUMAN (Alcohol dehydrogenase class-3 OS=Homo sapiens GN=ADH5 PE=1 SV=4)

HSP 1 Score: 72.4034 bits (176), Expect = 1.273e-12
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKM 175
            TAFGG+KS   VP LV +YM K+IKVDE++THN++  EIN+AF  MH G  +R V+K+
Sbjct:  317 TAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI 374          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_UROHA (Alcohol dehydrogenase class-3 OS=Uromastyx hardwickii PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.663e-12
Identity = 33/57 (57.89%), Postives = 42/57 (73.68%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLK 172
            TAFGG+KS   VP LVD+YM K++KVDE++TH +   +INEAF  MH G  +R VLK
Sbjct:  316 TAFGGWKSVESVPKLVDEYMSKKMKVDEFVTHTLPFEQINEAFELMHAGKSIRSVLK 372          
BLAST of EY692403 vs. ExPASy Swiss-Prot
Match: ADHX_OCTVU (Alcohol dehydrogenase class-3 OS=Octopus vulgaris PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.172e-12
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 2
Query:    2 TAFGGFKSRSQVPWLVDKYMKKEIKVDEYITHNMTLWEINEAFHYMHGGDCLRCVLKMQE 181
            TAFGGFKSR  VP LVD YM K++ +DE+++H ++  +INEAF  MH G+ +R VL + E
Sbjct:  319 TAFGGFKSRDSVPKLVDDYMNKKLLLDEFVSHKLSFKKINEAFDLMHKGESIRAVLDIPE 378          
The following BLAST results are available for this feature:
BLAST of EY692403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
ADHX_MAIZE2.094e-2383.05Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_PEA8.797e-2276.67Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHX_ARATH7.447e-2180.36Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_ORYSJ1.405e-1975.00Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSI1.405e-1975.00Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHL6_ARATH3.958e-1460.34Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_MOUSE9.749e-1358.62Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADHX_HUMAN1.273e-1256.90Alcohol dehydrogenase class-3 OS=Homo sapiens GN=A... [more]
ADHX_UROHA1.663e-1257.89Alcohol dehydrogenase class-3 OS=Uromastyx hardwic... [more]
ADHX_OCTVU2.172e-1253.33Alcohol dehydrogenase class-3 OS=Octopus vulgaris ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-071-B05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692403 ID=EY692403; Name=EY692403; organism=Citrus sinensis; type=EST; length=496bp
AACAGCTTTTGGTGGTTTCAAGAGCCGTTCACAAGTGCCTTGGCTTGTAG
ACAAGTACATGAAGAAGGAAATTAAGGTTGATGAGTACATAACTCACAAT
ATGACTCTTTGGGAGATCAACGAGGCATTCCATTATATGCATGGAGGGGA
CTGCCTACGCTGTGTGCTTAAAATGCAGGAATGAGAGGATCTATTGAGCC
CTGCATTAGTTCTTATGAAATGGTATATTTTGGTGTTTACATGGAAATTG
CATCCTTTTATGTGCAAACTGTGAGTGTGTGAAGAAAACTACTCTAATGT
GAGATAGTTTGGCATGTGTTGCAGCAAAAATGTTTCTATTCAACTTTATT
AAGCAGCACATTGCTAAAGGACTTGCATCACAATAATAAATGTGTTGTCT
ATGAAGTATGAACTAACTGCTGCTGCAGAAGCTTTCAGAATAACATTTAT
GGATCCCTGAAAGTTGTCTGGGGGTTGTTTAAAAAAAAAAAAAAAA
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