CX303396

Overview
NameCX303396
Unique NameCX303396
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length622
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_ARATH (Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.061e-20
Identity = 58/147 (39.46%), Postives = 84/147 (57.14%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLV----NRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYG----FRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            +D+YT LPE+ +R+L T  +A W Y+ + V     +G + ++  F      L++TF GP + G+YS SVQ TLYLM    +K    +  + L MPNIH LP NL T       + KD      ++ P DEPHG I+AT++R I S+L
Sbjct:  170 RDKYTILPETRERMLATEVNASWRYSYESVASIPTKG-LYFSEKFMDVKKVLMDTFFGPPETGVYSPSVQRTLYLMGSAVLKRFADVSSIHLKMPNIHFLPVNLSTKENPSMVKFKDD-----VYLPTDEPHGSIEATLSR-ITSKL 309          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_PIG (Uricase OS=Sus scrofa GN=UOX PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.131e-18
Identity = 49/139 (35.25%), Postives = 79/139 (56.83%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A+++   + +L+ F+GP DKG YS SVQ+TLY +    + +V  I+++ + +PNIH L  ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYHQGR----DVDFEATWDTVRSIVLQKFAGPYDKGEYSPSVQKTLYDIQVLTLGQVPEIEDMEISLPNIHYLNIDMSKMGLINKEE-----VLLPLDNPYGRITGTVKRKLTSRL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_AOTTR (Uricase OS=Aotus trivirgatus GN=UOX PE=3 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.131e-18
Identity = 49/139 (35.25%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR        +W Y+        +D+ A+++   + +LE F+GP DKG YS SVQ+TLY +   ++ +V  ID++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFAAQVYCKWRYHQCR----DVDFEATWDTIRDVVLEKFAGPYDKGEYSPSVQKTLYDIQVVSLSQVPEIDDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLSSRL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_RABIT (Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.929e-18
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y     +   +D+ A+++   + +LE F+GP DKG YS SVQ+TLY +    +  V  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  171 KDQFTTLPEVKDRCFATQVYCKWRYQ----HSQDVDFEATWDIVRDTVLEKFAGPYDKGEYSPSVQKTLYDIQVLTLSRVPQIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLSSRL 300          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC2_SOYBN (Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 1.929e-18
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDL---VNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPF---IFYPIDEPHGMIKATVTR 401
            +D+YT+LP++ +R+L T   A W Y+ +    + +  + +   +++    L +TF GP + G+YS SVQ TLYLMA   +     I  V+L MPN+H LP N+      NKD     F   ++ P DEPHG I+A+++R
Sbjct:  171 RDKYTALPDTRERILATEVTALWRYSYESQYSLPQKPLYFTEKYQEVKKVLADTFFGPPNGGVYSPSVQNTLYLMAKATLNRFPDIAYVSLKMPNLHFLPVNIS-----NKDGPIVKFEDDVYLPTDEPHGSIQASLSR 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_BOVIN (Uricase OS=Bos taurus GN=UOX PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 2.519e-18
Identity = 48/139 (34.53%), Postives = 78/139 (56.12%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A++E     +L+ F+GP DKG YS SVQ+TLY +   ++ ++  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYHQGR----DVDFEATWEAVRGIVLKKFAGPYDKGEYSPSVQKTLYDIQVLSLSQLPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGRITGTVKRKLTSRL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC1_CANLI (Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.611e-18
Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDL---VNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPF---IFYPIDEPHGMIKATVTR 401
            +D+YT+LPE+ +R+L T   A W Y+ +    + +  + +   + +    L + F GP + G+YS SVQ TLYLMA  A+     I  + L MPNIH LP N+      NKD     F   ++ P DEPHG I+A++ R
Sbjct:  170 RDKYTALPETHERMLATEVTALWRYSYESLYSIPQKPLYFTDKYLEVKKVLADNFFGPPNVGVYSPSVQNTLYLMAKAALNRFPEIASIQLKMPNIHFLPVNIS-----NKDGPIVKFEADVYLPTDEPHGSIQASLRR 303          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_PAPHA (Uricase OS=Papio hamadryas GN=UOX PE=2 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 7.329e-18
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A++    + +LE F+GP DKG YS SVQ+TLY +   ++  V  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYHQCR----DVDFEATWGTIRDLVLEKFAGPYDKGEYSPSVQKTLYDIQVLSLSRVPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLSSRL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_MACMU (Uricase OS=Macaca mulatta GN=UOX PE=3 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 7.329e-18
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A++    + +LE F+GP DKG YS SVQ+TLY +   ++  V  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYHQCR----DVDFEATWGTIRDLVLEKFAGPYDKGEYSPSVQKTLYDIQVLSLSRVPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLSSRL 304          
BLAST of CX303396 vs. ExPASy Swiss-Prot
Match: URIC_MACFA (Uricase OS=Macaca fascicularis GN=UOX PE=3 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 7.329e-18
Identity = 49/139 (35.25%), Postives = 77/139 (55.40%), Query Frame = 3
Query:    3 KDRYTSLPESTDRLLGTSADAEWVYNSDLVNRGKIDYNASFEKAVNALLETFSGPADKGIYSKSVQETLYLMACDAIKEVNSIDEVTLMMPNIHNLPFNLETYGFRNKDHTGNPFIFYPIDEPHGMIKATVTRTIRSRL 419
            KD++T+LPE  DR   T    +W Y+        +D+ A++    + +LE F+GP DKG YS SVQ+TLY +   ++  V  I+++ + +PNIH    ++   G  NK+      +  P+D P+G I  TV R + SRL
Sbjct:  175 KDQFTTLPEVKDRCFATQVYCKWRYHQCR----DVDFEATWGTIRDLVLEKFAGPYDKGEYSPSVQKTLYDIQVLSLSRVPEIEDMEISLPNIHYFNIDMSKMGLINKEE-----VLLPLDNPYGKITGTVKRKLSSRL 304          
The following BLAST results are available for this feature:
BLAST of CX303396 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
URIC_ARATH2.061e-2039.46Uricase OS=Arabidopsis thaliana GN=At2g26230 PE=1 ... [more]
URIC_PIG1.131e-1835.25Uricase OS=Sus scrofa GN=UOX PE=2 SV=3[more]
URIC_AOTTR1.131e-1835.25Uricase OS=Aotus trivirgatus GN=UOX PE=3 SV=3[more]
URIC_RABIT1.929e-1835.25Uricase OS=Oryctolagus cuniculus GN=UOX PE=2 SV=1[more]
URIC2_SOYBN1.929e-1836.69Uricase-2 isozyme 2 OS=Glycine max PE=1 SV=1[more]
URIC_BOVIN2.519e-1834.53Uricase OS=Bos taurus GN=UOX PE=2 SV=3[more]
URIC1_CANLI5.611e-1837.41Uricase-2 isozyme 1 OS=Canavalia lineata PE=2 SV=1[more]
URIC_PAPHA7.329e-1835.25Uricase OS=Papio hamadryas GN=UOX PE=2 SV=3[more]
URIC_MACMU7.329e-1835.25Uricase OS=Macaca mulatta GN=UOX PE=3 SV=3[more]
URIC_MACFA7.329e-1835.25Uricase OS=Macaca fascicularis GN=UOX PE=3 SV=3[more]

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Properties
Property NameValue
Genbank descriptionC08030G08SK PhyRootSw1 Citrus sinensis cDNA clone C08030G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303396 ID=CX303396; Name=CX303396; organism=Citrus sinensis; type=EST; length=622bp
CAAAAGATCGCTACACCTCTTTACCGGAGTCTACTGACCGTCTCTTGGGC
ACGTCAGCCGATGCTGAGTGGGTCTATAACTCTGACTTAGTCAACAGAGG
TAAAATCGACTACAATGCGAGCTTTGAGAAGGCTGTAAATGCATTATTAG
AGACCTTTAGTGGTCCTGCTGATAAAGGTATTTACAGTAAATCAGTGCAA
GAGACTCTCTATTTAATGGCATGTGATGCGATTAAGGAAGTTAACAGTAT
TGATGAAGTCACTTTAATGATGCCTAACATTCATAACCTTCCTTTTAACC
TTGAAACTTATGGTTTCCGTAATAAAGATCATACTGGAAATCCTTTTATC
TTTTATCCAATTGATGAACCACATGGAATGATCAAGGCAACTGTGACAAG
AACTATTAGATCAAGATTGTAAACACCTTTATTTCTGTCTTTCGATCTTT
GGAAAGTGACGAATACTATCACTCACTAGAATCACATTACAAAACTGCGT
CATATCGTAAAAATAAACAGAAACATTGTTAGATTATATGTGTAGAATAG
GATGGGGGAGATACTCTCTTCATTTGAACGATTTAAAATAAAGCAATCAA
AGTCAAAAAAAAAAAAAAAAAA
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