CX303394

Overview
NameCX303394
Unique NameCX303394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length549
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5034 contig Csv1_Contig5034:1..549. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIP2_ARATH (Triacylglycerol lipase 2 OS=Arabidopsis thaliana GN=LIP2 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.627e-57
Identity = 100/143 (69.93%), Postives = 119/143 (83.22%), Query Frame = 3
Query:    6 ITSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVAFFKRQ 434
            ++ +TG+NCCLN+ST+DLFL NEPQSTSTKNM+HLAQTVRD  + K+NYG  D N+ HYG+  PP YNIS IPH+LPLF SYGG D+LADV+DVE LLD FK+HD DK+ VQF+K Y HADFIMG+ AKD+VYNQV  FFKRQ
Sbjct:  275 VSVITGKNCCLNASTIDLFLANEPQSTSTKNMIHLAQTVRDKELRKYNYGSSDRNIKHYGQAIPPAYNISAIPHELPLFFSYGGLDSLADVKDVEFLLDQFKYHDIDKMNVQFVKDYAHADFIMGVTAKDVVYNQVATFFKRQ 417          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIP1_ARATH (Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 1.756e-27
Identity = 59/142 (41.55%), Postives = 90/142 (63.38%), Query Frame = 3
Query:    3 FITSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVAFFK 428
            F+TS+TG NCC N+S ++ +L  EP  +S KN+ HL Q +R G  A+++YG    NL  YG  +PP + +S+IP  LP+++ YGG D LADV DVE+ L            + +++ YGH DF++G +AK+ VY  ++ FF+
Sbjct:  249 FLTSITGTNCCFNASKIEYYLDYEPHPSSVKNIRHLFQMIRKGTFAQYDYGY-FKNLRTYGLSKPPEFILSHIPASLPMWMGYGGTDGLADVTDVEHTLAELP----SSPELLYLEDYGHIDFVLGSSAKEDVYKHMIQFFR 385          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPK_MOUSE (Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19
Identity = 51/139 (36.69%), Postives = 79/139 (56.83%), Query Frame = 3
Query:    3 FITSLTGRNCC-LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVV 416
            F+ SL+G +   LN S +D++L   P  TS +NM+H AQ V  G +  F++G PD N+MH+ +  PP+YNIS +   +P  +  GG D +AD +D +NLL        + +  + I  Y H DF +G +A   VY  ++
Sbjct:  257 FLFSLSGFDPQNLNMSRLDVYLSQSPAGTSVQNMLHWAQAVNSGQLQAFDWGNPDQNMMHFNQLTPPVYNISKM--RVPTAMWSGGQDVVADAKDTKNLLPKI----ANLIYYKEIPHYNHMDFYLGQDAPQEVYGDLI 389          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPK_HUMAN (Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 3.001e-19
Identity = 46/127 (36.22%), Postives = 74/127 (58.27%), Query Frame = 3
Query:   36 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVV 416
            LN S +D++L + P  TS +NM+H AQ V  G +  F++G  D N+MH+ +  PP+YNI+ +  ++P  +  GG D +AD +DVENLL        + +  + I  Y H DF +G +A   +Y  ++
Sbjct:  270 LNMSRLDVYLSHNPAGTSVQNMLHWAQAVNSGQLQAFDWGNSDQNMMHFHQLTPPLYNITKM--EVPTAIWNGGQDIVADPKDVENLLPQI----ANLIYYKLIPHYNHVDFYLGEDAPQEIYQDLI 390          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPG_CANFA (Gastric triacylglycerol lipase OS=Canis familiaris GN=LIPF PE=1 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 6.686e-19
Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = 3
Query:   36 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVAFFKRQN 437
            LN S +D++L + P  TS +N++H +Q V+ G    F++G P  N+MHY +  PP YN++++   +P+ V  GGND LAD  DV+ LL        + +  + I  Y H DFI  ++A   VYN++V+     N
Sbjct:  270 LNMSRLDVYLSHNPAGTSVQNVLHWSQAVKSGKFQAFDWGSPVQNMMHYHQSMPPYYNLTDM--HVPIAVWNGGNDLLADPHDVDLLLSKLP----NLIYHRKIPPYNHLDFIWAMDAPQAVYNEIVSMMGTDN 397          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPG_RAT (Gastric triacylglycerol lipase OS=Rattus norvegicus GN=Lipf PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 1.647e-17
Identity = 49/128 (38.28%), Postives = 74/128 (57.81%), Query Frame = 3
Query:   36 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVA 419
            LN S  D++L + P  TS ++ +H AQ VR G    FN+G P  N++HY +  PP Y++S +   +P+ V  GGND LAD +DV  LL        + L  + I +Y H DFI  ++A   VYN++++
Sbjct:  269 LNVSRFDVYLGHNPAGTSVQDFLHWAQLVRSGKFQAFNWGSPSQNMLHYNQKTPPEYDVSAM--TVPVAVWNGGNDILADPQDVAMLLPKL----SNLLFHKEILAYNHLDFIWAMDAPQEVYNEMIS 390          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPG_BOVIN (Gastric triacylglycerol lipase OS=Bos taurus GN=LIPF PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 4.792e-17
Identity = 49/138 (35.51%), Postives = 79/138 (57.25%), Query Frame = 3
Query:    6 ITSLTGRNCCLNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVA 419
            IT +  +N   N S +D+++ + P  TS +N +H  Q V+ G    F++G P  NLMHY +  PPIYN++ +  ++P+ V    ND LAD +DV+ LL        + +  + I +Y H DFI  ++A   VYN++V+
Sbjct:  261 ITGVDNKN--FNMSRLDVYIAHNPAGTSVQNTLHWRQAVKSGKFQAFDWGAPYQNLMHYHQPTPPIYNLTAM--NVPIAVWSADNDLLADPQDVDFLLSKL----SNLIYHKEIPNYNHLDFIWAMDAPQEVYNEIVS 390          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPG_MOUSE (Gastric triacylglycerol lipase OS=Mus musculus GN=Lipf PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.378e-16
Identity = 47/127 (37.01%), Postives = 73/127 (57.48%), Query Frame = 3
Query:   36 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVV 416
            LN S  D++L + P  TST+++ H AQ  + G +  +N+G P  N++HY +  PP Y++S +   +P+ V  GG+D LAD +DV  LL        + L  + I  Y H DFI  ++A   VYN++V
Sbjct:  269 LNVSRFDVYLGHNPAGTSTQDLFHWAQLAKSGKLQAYNWGSPLQNMLHYNQKTPPYYDVSAM--TVPIAVWNGGHDILADPQDVAMLLPKLP----NLLYHKEILPYNHLDFIWAMDAPQEVYNEIV 389          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LIPG_HUMAN (Gastric triacylglycerol lipase OS=Homo sapiens GN=LIPF PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 3.106e-16
Identity = 46/127 (36.22%), Postives = 72/127 (56.69%), Query Frame = 3
Query:   39 NSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLLDSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVA 419
            N+S +D++L + P  TS +NM H  Q V+ G    +++G P  N MHY + +PP YN++ +  ++P+ V  GG D LAD +DV  LL        + +  + I  Y H DFI  ++A   VYN +V+
Sbjct:  271 NTSRLDVYLSHNPAGTSVQNMFHWTQAVKSGKFQAYDWGSPVQNRMHYDQSQPPYYNVTAM--NVPIAVWNGGKDLLADPQDVGLLLPKLP----NLIYHKEIPFYNHLDFIWAMDAPQEVYNDIVS 391          
BLAST of CX303394 vs. ExPASy Swiss-Prot
Match: LICH_RAT (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Rattus norvegicus GN=Lipa PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 3.434e-15
Identity = 48/135 (35.56%), Postives = 72/135 (53.33%), Query Frame = 3
Query:   36 LNSSTVDLFLRNEPQSTSTKNMVHLAQTVRDGVIAKFNYGRPDYNLMHYGEFRPPIYNISNIPHDLPLFVSYGGNDALADVRDVENLL---DSFKFHDGDKLGVQFIKSYGHADFIMGINAKDIVYNQVVAFFKR 431
            LN S VD++  + P  TS +NMVH  Q V+   +  F++G  D N  HY +  PP+Y+I ++   LP  +  GG D LAD  D+  LL    +  +H         I  + H DFI G++A   +YN+VV+  K+
Sbjct:  270 LNMSRVDVYTTHCPAGTSVQNMVHWTQVVKYHKLQAFDWGSSDKNYFHYNQSYPPLYSIKDM--QLPTALWSGGKDWLADTSDINILLTEIPTLVYHKN-------IPEWDHLDFIWGLDAPWRLYNEVVSLMKK 395          
The following BLAST results are available for this feature:
BLAST of CX303394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
LIP2_ARATH3.627e-5769.93Triacylglycerol lipase 2 OS=Arabidopsis thaliana G... [more]
LIP1_ARATH1.756e-2741.55Triacylglycerol lipase 1 OS=Arabidopsis thaliana G... [more]
LIPK_MOUSE3.001e-1936.69Lipase member K OS=Mus musculus GN=Lipk PE=2 SV=1[more]
LIPK_HUMAN3.001e-1936.22Lipase member K OS=Homo sapiens GN=LIPK PE=2 SV=2[more]
LIPG_CANFA6.686e-1936.57Gastric triacylglycerol lipase OS=Canis familiaris... [more]
LIPG_RAT1.647e-1738.28Gastric triacylglycerol lipase OS=Rattus norvegicu... [more]
LIPG_BOVIN4.792e-1735.51Gastric triacylglycerol lipase OS=Bos taurus GN=LI... [more]
LIPG_MOUSE2.378e-1637.01Gastric triacylglycerol lipase OS=Mus musculus GN=... [more]
LIPG_HUMAN3.106e-1636.22Gastric triacylglycerol lipase OS=Homo sapiens GN=... [more]
LICH_RAT3.434e-1535.56Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]

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Properties
Property NameValue
Genbank descriptionC08030G06SK PhyRootSw1 Citrus sinensis cDNA clone C08030G06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303394 ID=CX303394; Name=CX303394; organism=Citrus sinensis; type=EST; length=549bp
GATTTATTACATCACTTACTGGGAGAAATTGCTGTCTCAATTCTTCCACA
GTCGATCTCTTCTTGAGAAATGAACCTCAATCAACATCAACCAAAAACAT
GGTGCACTTGGCTCAAACTGTTCGAGATGGAGTAATTGCAAAGTTCAACT
ATGGGAGACCTGACTACAATCTAATGCATTACGGGGAATTTAGACCACCC
ATATACAATATCTCCAACATTCCCCATGACCTGCCTCTCTTCGTCAGCTA
TGGAGGCAACGATGCACTGGCTGATGTTAGAGATGTCGAGAATTTACTCG
ACAGTTTCAAGTTTCACGACGGGGACAAGCTGGGTGTTCAATTCATCAAA
AGCTATGGACATGCAGATTTCATCATGGGCATCAATGCCAAGGATATTGT
GTATAACCAAGTAGTAGCTTTCTTTAAACGTCAAAACTAATCAATAATTA
CAATTAATGTCCTTAATTAAAAGAGCTAGGCCCGATGAATTTTCCTTTTN
NAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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