CX303393

Overview
NameCX303393
Unique NameCX303393
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length662
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STI1L_PLAF7 (STI1-like protein OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0324 PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.330e-28
Identity = 62/169 (36.69%), Postives = 103/169 (60.95%), Query Frame = 1
Query:   16 SAIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            +A +EY+EA +R+P              K+  +  A  +V  ++ELD  +VKA+++KG++ FFMK+Y++AL +Y  GL+L+P N  C +G  +   KI E + + ++D+E+   +MADPEIQ I+ DP  + +LQ   ENP    + + D  I   ++KLI AG+L+V+
Sbjct:  396 NAKKEYDEAIRRNPNDAKLYSNRAAALTKLIEYPSALEDVMKAIELDPTFVKAYSRKGNLHFFMKDYYKALQAYNKGLELDPNNKECLEGYQRCAFKIDEMSKSEKVDEEQFKKSMADPEIQQIISDPQFQIILQKLNENPNSISEYIKDPKIFNGLQKLIAAGILKVR 564          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP_SOYBN (Heat shock protein STI OS=Glycine max GN=STI PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.150e-25
Identity = 61/166 (36.75%), Postives = 95/166 (57.23%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEA---NMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAG 507
            A + Y EA KR+PK             K+G   +  ++ E  +ELD  + K + +KG ++F MKEY +AL++Y+ GL+ +P N     G+ + + +I +A   + T E  KER A AM DPEIQ+IL DP + QVL DFQENP+ A++ + +  +  K + +   G
Sbjct:  400 ATKHYTEAIKRNPKDAKAYSNRAACYTKLGAMPEGLKDAEKCIELDPTFSKGYTRKGAVQFSMKEYDKALETYREGLKHDPNNQELLDGIRRCVEQINKASRGDFTPEELKERQAKAMQDPEIQSILQDPVMTQVLTDFQENPRAAEEHVKNPMVMNKTQNVTVPG 565          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_DICDI (Protein STIP1 homolog OS=Dictyostelium discoideum GN=sti1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.239e-21
Identity = 58/167 (34.73%), Postives = 93/167 (55.69%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQV 519
            AI+ +EEA +R+PK             K+  +  A ++ +  +EL+  ++K + +KG   F M+EY +AL+ Y  GL++E  N        KT+A + +   T   D+ER   A  DPEIQ IL DP + Q+L+D  ENP  AQ  + +  I  K +KL+NAG++++
Sbjct:  398 AIKCFEEAIRRNPKDHTIYSNRSAAYSKLLEYKLAIKDADKCIELEPTFIKGYIRKGTALFAMREYQQALEVYDQGLRIEANNPELLDLSRKTVAALTKLQST-LTDEERLQQAAKDPEIQKILSDPIMNQILKDMSENPAAAQDHLKNPLIMAKFQKLVNAGIVKL 563          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_MACFA (Stress-induced-phosphoprotein 1 OS=Macaca fascicularis GN=STIP1 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 7.776e-16
Identity = 47/168 (27.98%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+PK             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSRKEAADGYQRCMMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_CRIGR (Stress-induced-phosphoprotein 1 OS=Cricetulus griseus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.016e-15
Identity = 47/168 (27.98%), Postives = 89/168 (52.98%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+PK             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L+L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALELDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_HUMAN (Stress-induced-phosphoprotein 1 OS=Homo sapiens GN=STIP1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.732e-15
Identity = 47/168 (27.98%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+PK             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_BOVIN (Stress-induced-phosphoprotein 1 OS=Bos taurus GN=STIP1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.262e-15
Identity = 47/168 (27.98%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+PK             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSNCKEAADGYQRCVMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STI1_SCHPO (Heat shock protein sti1 homolog OS=Schizosaccharomyces pombe GN=sti1 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.262e-15
Identity = 49/174 (28.16%), Postives = 86/174 (49.43%), Query Frame = 1
Query:   16 SAIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQL---EPENALCKQGLNKTLAKIQEANMT---GEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQV 519
            +AI+EY E  KR P              K+    +  R+   ++ELD N+ KA+ +K    F +K+Y++ +D+     ++   EP      + +   L+K   A  +    E ++E  A    DPE+  IL DP ++ +L   +ENP    + M +  ++ KIEKLI +GV+++
Sbjct:  417 NAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREIESQLSKCMSAMASQRQNETEEETMARIQKDPEVLGILQDPAMQAILGQARENPAALMEHMKNPTVKSKIEKLIASGVIRL 590          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_RAT (Stress-induced-phosphoprotein 1 OS=Rattus norvegicus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 46/168 (27.38%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+P+             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
BLAST of CX303393 vs. ExPASy Swiss-Prot
Match: STIP1_MOUSE (Stress-induced-phosphoprotein 1 OS=Mus musculus GN=Stip1 PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 46/168 (27.38%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   19 AIQEYEEACKRDPKXXXXXXXXXXXXXKMGVFNDAKREVELSLELDRNYVKAWAKKGDIEFFMKEYHRALDSYKAGLQLEPENALCKQGLNKTLAKIQEANMTGEMDKERAAHAMADPEIQAILMDPTIRQVLQDFQENPKFAQQAMGDADIRRKIEKLINAGVLQVK 522
            A++ Y EA KR+P+             K+  F  A ++ E  ++L+  ++K + +K      MK+Y +A+D Y+  L L+        G  + +      + + E  K RA   MADPE+Q I+ DP +R +L+  Q++P+   + + +  I +KI+KL++ G++ ++
Sbjct:  379 AMKHYTEAIKRNPRDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSCKEAADGYQRCMMAQYNRHDSPEDVKRRA---MADPEVQQIMSDPAMRLILEQMQKDPQALSEHLKNPVIAQKIQKLMDVGLIAIR 543          
The following BLAST results are available for this feature:
BLAST of CX303393 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
STI1L_PLAF72.330e-2836.69STI1-like protein OS=Plasmodium falciparum (isolat... [more]
STIP_SOYBN3.150e-2536.75Heat shock protein STI OS=Glycine max GN=STI PE=2 ... [more]
STIP1_DICDI1.239e-2134.73Protein STIP1 homolog OS=Dictyostelium discoideum ... [more]
STIP1_MACFA7.776e-1627.98Stress-induced-phosphoprotein 1 OS=Macaca fascicul... [more]
STIP1_CRIGR1.016e-1527.98Stress-induced-phosphoprotein 1 OS=Cricetulus gris... [more]
STIP1_HUMAN1.732e-1527.98Stress-induced-phosphoprotein 1 OS=Homo sapiens GN... [more]
STIP1_BOVIN2.262e-1527.98Stress-induced-phosphoprotein 1 OS=Bos taurus GN=S... [more]
STI1_SCHPO2.262e-1528.16Heat shock protein sti1 homolog OS=Schizosaccharom... [more]
STIP1_RAT3.859e-1527.38Stress-induced-phosphoprotein 1 OS=Rattus norvegic... [more]
STIP1_MOUSE3.859e-1527.38Stress-induced-phosphoprotein 1 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionC08030G05SK PhyRootSw1 Citrus sinensis cDNA clone C08030G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX303393 ID=CX303393; Name=CX303393; organism=Citrus sinensis; type=EST; length=662bp
GGATTCGGCCGAGGCTCAGCCATCCAAGAGTACGAAGAAGCATGCAAACG
TGACCCTAAGAATGCTGCTTATCACAATAATCTTGCTGCAGCATATTTAA
AAATGGGTGTATTTAATGATGCTAAGCGTGAAGTTGAGCTATCATTGGAG
TTAGATCGTAATTATGTGAAAGCATGGGCTAAGAAAGGAGATATTGAATT
CTTTATGAAGGAATATCATCGTGCTTTAGACAGTTATAAAGCAGGTTTAC
AACTTGAACCAGAAAATGCATTATGTAAACAAGGTCTTAATAAAACATTA
GCTAAGATCCAAGAGGCAAATATGACTGGTGAGATGGATAAGGAAAGAGC
TGCACATGCTATGGCTGATCCTGAAATTCAAGCAATTTTAATGGATCCTA
CAATTCGTCAAGTCTTACAAGATTTCCAAGAGAACCCAAAATTTGCTCAA
CAAGCTATGGGTGATGCTGATATTCGTCGAAAAATCGAAAAGTTGATCAA
CGCAGGTGTTTTACAAGTGAAATAAATACTTAATGCTTTAACATGATTTC
TATTTTTTCTCCTTACTGCTTGTATTTTGCCAAGGTACTTGTTGATGTTA
AGATGGGATTCCATAGGGTAGGAAGTAAGATTATGATGATGTATGAATAA
TAGGGAGGTGGA
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