EY692383

Overview
NameEY692383
Unique NameEY692383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY692383_ssr174 microsatellite EY692383_ssr174:174..185. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B1_ARATH (Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790 PE=1 SV=3)

HSP 1 Score: 186.037 bits (471), Expect = 1.507e-46
Identity = 104/144 (72.22%), Postives = 107/144 (74.31%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLAAF----------KAPAAEKKSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP  EKKPAEKK AA           KAPA +K    +                  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    1 MAPRAEKKPAEKKTAAERPVEENKAAEKAPAEKKPKAGKKLPPKEAGDKKKKRSKKNVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B1_MEDTR (Probable histone H2B.1 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 185.652 bits (470), Expect = 1.968e-46
Identity = 109/145 (75.17%), Postives = 111/145 (76.55%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLA-------AFKAPAAEKKSRA----EXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP GEKKPAEKK A       A KAPA EKK +A                      +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    1 MAPKGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 144          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B3_MEDTR (Probable histone H2B.3 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 9.769e-46
Identity = 100/129 (77.52%), Postives = 104/129 (80.62%), Query Frame = 3
Query:   75 EKKPAEKKLAAFKAPAAEKKSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            EKKPAEKK A  KAPA +K    +                 +VETYKIYIFKVLKQVHPDIG+SSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    7 EKKPAEKKPAE-KAPAEKKPKAEKKISKEGSSDKKKKRTKKSVETYKIYIFKVLKQVHPDIGVSSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 134          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B_GOSHI (Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 1.666e-45
Identity = 107/144 (74.31%), Postives = 110/144 (76.39%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLA------AFKAPAAEKKSRA----EXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP  EKKPAEKK A      A KAPA EKK +A                      +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    1 MAPKAEKKPAEKKPAEEKKAVAEKAPA-EKKPKAGKKLPKEGGAAAGDKKKKRVKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 143          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B2_MEDTR (Probable histone H2B.2 OS=Medicago truncatula PE=3 SV=3)

HSP 1 Score: 181.8 bits (460), Expect = 2.842e-45
Identity = 107/145 (73.79%), Postives = 109/145 (75.17%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLA-------AFKAPAAEKKSRA----EXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP GEKKPAEKK A       A KAPA EKK +A                      +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKL QESSRLARYNKKPTITSREIQTAVRLVLPGELAKH VSEGTKAVTK
Sbjct:    1 MAPKGEKKPAEKKPAEEKKSTVAEKAPA-EKKPKAGKKLPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLTQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHDVSEGTKAVTK 144          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B3_SOLLC (Histone H2B.3 (Fragment) OS=Solanum lycopersicum GN=H2B-3 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.712e-45
Identity = 100/130 (76.92%), Postives = 104/130 (80.00%), Query Frame = 3
Query:   75 EKKPAEKKLAAFKAPAAEK-KSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            EKKPAEK   A KAPA +K K+  +                  VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQE+SRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    4 EKKPAEKTPVAEKAPAEKKPKAGKKLPKDAAAGDKKKKRSKKAVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQEASRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 133          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B9_ARATH (Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570 PE=1 SV=3)

HSP 1 Score: 180.644 bits (457), Expect = 6.332e-45
Identity = 102/134 (76.12%), Postives = 103/134 (76.87%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLAAFKAPAAEKKSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP  EKKPAEK      AP AEKK   E                 + ETYKIYIFKVLKQVHPDIGIS KAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    1 MAPKAEKKPAEKA----PAPKAEKKIAKEGGTSEIVKKKKKTKK--STETYKIYIFKVLKQVHPDIGISGKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 128          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSJ (Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H2B1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.270e-45
Identity = 102/154 (66.23%), Postives = 112/154 (72.73%), Query Frame = 3
Query:   15 PDSRVDPASESKRNQMAPLGEKKPAEKKLAAFKAP-----AAEKKSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            P  +   A E K  + AP G+K  AEK+L A KA      A +KK R +                 +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTK
Sbjct:    9 PAEKKPAAGEEKSAEKAPAGKKPKAEKRLPASKASSKEGGAGDKKGRKKAKK--------------SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 148          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B1_ORYSI (Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI_010709 PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.270e-45
Identity = 102/154 (66.23%), Postives = 112/154 (72.73%), Query Frame = 3
Query:   15 PDSRVDPASESKRNQMAPLGEKKPAEKKLAAFKAP-----AAEKKSRAEXXXXXXXXXXXXXXXXXTVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            P  +   A E K  + AP G+K  AEK+L A KA      A +KK R +                 +VETYKIYIFKVLKQVHPDIGISSKAM IMNSFINDIFEKLAQE++RLARYNKKPTITSREIQT+VRLVLPGELAKHAVSEGTKAVTK
Sbjct:    9 PAEKKPAAGEEKSAEKAPAGKKPKAEKRLPASKASSKEGGAGDKKGRKKAKK--------------SVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAQEAARLARYNKKPTITSREIQTSVRLVLPGELAKHAVSEGTKAVTK 148          
BLAST of EY692383 vs. ExPASy Swiss-Prot
Match: H2B7_ARATH (Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030 PE=1 SV=3)

HSP 1 Score: 179.874 bits (455), Expect = 1.080e-44
Identity = 103/141 (73.05%), Postives = 107/141 (75.89%), Query Frame = 3
Query:   60 MAPLGEKKPAEKKLAAFKAPA----AEKKSRAEXXXXXXXXXXXXXXXXX---TVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 461
            MAP  EKKPAEKK    K+ A    AEKK +A                     +VETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLA ESS+LARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK
Sbjct:    1 MAPKAEKKPAEKKPVEEKSKAEKAPAEKKPKAGKKLPKEAGAGGDKKKKMKKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLASESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTK 141          
The following BLAST results are available for this feature:
BLAST of EY692383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
H2B1_ARATH1.507e-4672.22Histone H2B.1 OS=Arabidopsis thaliana GN=At1g07790... [more]
H2B1_MEDTR1.968e-4675.17Probable histone H2B.1 OS=Medicago truncatula PE=3... [more]
H2B3_MEDTR9.769e-4677.52Probable histone H2B.3 OS=Medicago truncatula PE=3... [more]
H2B_GOSHI1.666e-4574.31Histone H2B OS=Gossypium hirsutum GN=HIS2B PE=2 SV... [more]
H2B2_MEDTR2.842e-4573.79Probable histone H2B.2 OS=Medicago truncatula PE=3... [more]
H2B3_SOLLC3.712e-4576.92Histone H2B.3 (Fragment) OS=Solanum lycopersicum G... [more]
H2B9_ARATH6.332e-4576.12Histone H2B.9 OS=Arabidopsis thaliana GN=At5g02570... [more]
H2B1_ORYSJ8.270e-4566.23Histone H2B.1 OS=Oryza sativa subsp. japonica GN=H... [more]
H2B1_ORYSI8.270e-4566.23Histone H2B.1 OS=Oryza sativa subsp. indica GN=OsI... [more]
H2B7_ARATH1.080e-4473.05Histone H2B.7 OS=Arabidopsis thaliana GN=At3g46030... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C2-003-059-H05-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY692383 ID=EY692383; Name=EY692383; organism=Citrus sinensis; type=EST; length=674bp
CGGCGGGTCCGGGTCCGGATTCCCGGGTCGACCCCGCGTCTGAAAGTAAA
AGAAATCAAATGGCTCCTTTAGGGGAGAAAAAGCCCGCCGAGAAGAAGCT
GGCAGCCTTTAAGGCCCCNGCTGCCGAGAAAAAATCGAGGGCTGAGAAGA
AGCTTCCGAAAGACGGCGCCGACAAGAAGAAGAAGAAAGTGAAGAAGACC
GTGGAGACCTACAAGATCTACATATTCAAGGTGCTGAAGCAGGTGCATCC
TGATATAGGAATCTCCAGCAAGGCCATGGGTATCATGAACAGCTTTATCA
ACGATATCTTCGAGAAATTGGCTCAGGAGTCGTCTCGTCTCGCGAGATAC
AACAAGAAGCCCACTATCACTTCTCGTGAGATCCAGACTGCTGTTAGACT
TGTCTTGCCCGGTGAGCTTGCCAAGCATGCCGTTTCTGAAGGCACCAAGG
CTGTCACTAAGTTTACTAGCTCTTAATGAACCTATAGCTTCAATAATTCA
ATTAGTATCTTCTCTTTCTAGCTTGGGCTCTGCAATTTTTAAGGTCCTGT
TTCTTTTATTTTCCTTTTGGTTGTAGATTTTCTCTTTTGTTTACTTTTTG
TATCTACCCTTCCCAACAACCTAATCGAAGTTCTTTTTGCTCAAGTTCAA
TTATCAAAAAAAAAAAAAAAAAAG
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