CV712690

Overview
NameCV712690
Unique NameCV712690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4721 contig Csv1_Contig4721:14..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO1_PRUDU (Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 4.119e-42
Identity = 89/132 (67.42%), Postives = 104/132 (78.79%), Query Frame = 2
Query:   53 EHYQP--HEQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQF 442
            +H+Q   H Q     +QPRS+Q          GGSLLVLSGL +AGTVIALTIATPLLVI SPVLVPA+ITV+L+ MGFL SGGFGVAA++VLSWIY+YVTG  PPGADQL+Q R KLA KAR+++DRAEQF
Sbjct:    4 QHFQQPLHFQGSYGQQQPRSYQVAKAATAVTAGGSLLVLSGLVLAGTVIALTIATPLLVIFSPVLVPALITVALITMGFLTSGGFGVAAVTVLSWIYKYVTGKQPPGADQLDQARHKLAGKARDIKDRAEQF 135          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO1_ARATH (Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25140 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.859e-35
Identity = 75/127 (59.06%), Postives = 96/127 (75.59%), Query Frame = 2
Query:   71 EQTQLQSR---QPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQF 442
            +Q Q+  R     +S Q          GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+  RMKL SKA++++DRA+ +
Sbjct:   26 DQYQMSGRGSDYSKSRQIAKAATAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 152          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO3_BRANA (Oleosin Bn-III OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 6.369e-35
Identity = 71/114 (62.28%), Postives = 91/114 (79.82%), Query Frame = 2
Query:  101 RSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQF 442
            +S Q          GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV++LI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+  RMKL SKA++++DRA+ +
Sbjct:   53 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVAMLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDLKDRAQYY 166          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO2_BRANA (Major oleosin NAP-II (Fragment) OS=Brassica napus PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.419e-34
Identity = 71/114 (62.28%), Postives = 89/114 (78.07%), Query Frame = 2
Query:  101 RSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQF 442
            +S Q          GGSLLVLS LT+ GTVIALT+ATPLLVI SP+LVPA+ITV+LLI GFL+SGGFG+AAI+V SWIY+Y TG HP G+D+L+  RMKL  K ++M+DRA+ +
Sbjct:   41 KSRQIAKAVTAVTAGGSLLVLSSLTLVGTVIALTVATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGGKVQDMKDRAQYY 154          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO5_BRANA (Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.785e-33
Identity = 70/111 (63.06%), Postives = 86/111 (77.48%), Query Frame = 2
Query:  101 RSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRA 433
            +S Q          G SLLVLS LT+ GTVIAL +ATPLLVI SP+LVPA+ITV+LLI GFL+SG FG+AAI+V SWIY+Y TG HP G+D+L+  RMKL SKA++M+DRA
Sbjct:   41 KSRQIAKATTAVTAGDSLLVLSSLTLVGTVIALIVATPLLVIFSPILVPALITVALLITGFLSSGAFGIAAITVFSWIYKYATGEHPQGSDKLDSARMKLGSKAQDMKDRA 151          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO1_MAIZE (Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.958e-32
Identity = 68/123 (55.28%), Postives = 89/123 (72.36%), Query Frame = 2
Query:   68 HEQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAE 436
            H + Q Q +Q               GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPP ADQL+  + +LASKAR+++D A+
Sbjct:   25 HGEAQQQQKQGAMMTALKAATAATFGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPAADQLDHAKARLASKARDVKDAAQ 147          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLE16_BROSE (Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.864e-32
Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 2
Query:   71 EQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAE 436
            +  Q Q +QP              GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I+++L+  GF+ SGG GVAA+SV SW+Y+Y+ G HPPGADQL+  + +LASKAR+++D A+
Sbjct:   37 DDEQHQQKQPVMMCALKAATAATAGGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAISMALMSAGFVTSGGLGVAAVSVFSWMYKYLAGKHPPGADQLDHAKARLASKARDIKDAAQ 158          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO1_ORYSJ (Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=OLE16 PE=2 SV=2)

HSP 1 Score: 137.117 bits (344), Expect = 8.608e-32
Identity = 64/98 (65.31%), Postives = 84/98 (85.71%), Query Frame = 2
Query:  143 GGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAE 436
            GGS+LVLSGL +AGTVIALT+ATP+LVI SPVLVPA I ++L+  GF+ SGG GVAA+SV SW+Y+Y+TG HPPGADQL+  + +LASKAR++++ A+
Sbjct:   42 GGSMLVLSGLILAGTVIALTVATPVLVIFSPVLVPAAIALALMAAGFVTSGGLGVAALSVFSWMYKYLTGKHPPGADQLDHAKARLASKARDIKEAAQ 139          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO3_ARATH (Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 5.579e-31
Identity = 67/123 (54.47%), Postives = 90/123 (73.17%), Query Frame = 2
Query:   56 HYQPHEQTQLQSRQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMR 424
            H++   +   Q   P++ Q          GGSLLVLSGLT+AGTVIALT+ATPLLVI SPVLVPAV+TV+L+I GFLASGGFG+AAI+  SW+YR++TG    G+D++E  RMK+ S+ ++ +
Sbjct:    8 HHEMISRDSTQEAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVALIITGFLASGGFGIAAITAFSWLYRHMTGS---GSDKIENARMKVGSRVQDTK 127          
BLAST of CV712690 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 2
Query:   92 RQPRSHQXXXXXXXXXXGGSLLVLSGLTMAGTVIALTIATPLLVICSPVLVPAVITVSLLIMGFLASGGFGVAAISVLSWIYRYVTGGHPPGADQLEQVRMKLASKAREMRDRAEQ 439
            R P + Q          GG LL+L+GLT+AGT+  L +ATPL V+ SPVLVPA + + L + GFL SG FG+ A+S  SWI  Y+    P   +     +  LA  A  +  + ++
Sbjct:   49 RGPTTSQVLAVLAGLPVGGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKE 164          
The following BLAST results are available for this feature:
BLAST of CV712690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
OLEO1_PRUDU4.119e-4267.42Oleosin 1 OS=Prunus dulcis GN=OLE1 PE=2 SV=1[more]
OLEO1_ARATH2.859e-3559.06Oleosin 18.5 kDa OS=Arabidopsis thaliana GN=At4g25... [more]
OLEO3_BRANA6.369e-3562.28Oleosin Bn-III OS=Brassica napus PE=2 SV=1[more]
OLEO2_BRANA1.419e-3462.28Major oleosin NAP-II (Fragment) OS=Brassica napus ... [more]
OLEO5_BRANA7.785e-3363.06Oleosin Bn-V (Fragment) OS=Brassica napus PE=2 SV=... [more]
OLEO1_MAIZE2.958e-3255.28Oleosin Zm-I OS=Zea mays GN=OLE16 PE=2 SV=2[more]
OLE16_BROSE3.864e-3255.74Oleosin 16 kDa OS=Bromus secalinus GN=OLE16 PE=2 S... [more]
OLEO1_ORYSJ8.608e-3265.31Oleosin 16 kDa OS=Oryza sativa subsp. japonica GN=... [more]
OLEO3_ARATH5.579e-3154.47Oleosin 14.9 kDa OS=Arabidopsis thaliana GN=OL3 PE... [more]
OLEO1_SOYBN2.688e-1738.79P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001M06_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001M06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712690 ID=CV712690; Name=CV712690; organism=Citrus sinensis; type=EST; length=697bp
TTATCATCGACAAATAATCGCCGTTAGATTTAACATCAACACTGATATGG
CTGAACATTACCAACCACACGAGCAGACACAGCTGCAGAGCCGTCAGCCC
CGGTCCCACCAGGTCGTGAAGGCGGCAACCGCCGTCACAGCCGGTGGGTC
TCTGTTGGTCCTCTCTGGCTTAACCATGGCTGGGACTGTCATTGCACTGA
CCATTGCTACTCCACTGCTAGTCATATGTAGTCCTGTTCTTGTCCCTGCG
GTTATCACCGTTTCTCTTCTCATCATGGGGTTCTTGGCCTCTGGCGGATT
CGGTGTAGCAGCCATCAGCGTCTTATCATGGATTTATAGGTATGTCACAG
GGGGGCACCCACCAGGGGCGGATCAGCTGGAGCAGGTGCGGATGAAGCTG
GCCAGTAAGGCTAGGGAGATGAGGGACAGGGCTGAGCAGTTTGGGCAGCA
GCAAAGCACTGGCTCGCAGCCGGGTTCTTAAACTACGTAGTTATGCATGT
GATGAAGGGTTGTTGGTTGATAAAGATATGGGTGGAGATCAAACGGCTAT
GATACTAGTTGAGGGGTCATTGGTTGTCTTTTGTGTTAATTTGTGTCAAT
GTGTTTTTTCCTTTTTTGTATTCGTGGTAATCTTTGTAATAAGTTTTGTT
AATGTGGTGGGGCGCTCTTGCAGGGTTTTTATTATTGGTCTTTGAAA
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