CV712677

Overview
NameCV712677
Unique NameCV712677
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3917 contig Csv1_Contig3917:8..843. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO6_GOSHI (Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 8.651e-35
Identity = 81/134 (60.45%), Postives = 96/134 (71.64%), Query Frame = -3
Query:  289 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKTGRT 690
            GPS S+VLAVL +LP+GGT LALAG+ L GT+IGL + TPLFIIFS             VTGFL+SGAFGLT LSSLS+VL+ LR  TG+     D AK+RV  M +YVGQKTKEVGQ I++K HE  G+ GRT
Sbjct:   37 GPSTSQVLAVLTLLPIGGTLLALAGLTLAGTVIGLMLATPLFIIFSPVLVPAAIAIAMAVTGFLSSGAFGLTGLSSLSYVLNRLRYATGTEQLDLDHAKRRVQDMTEYVGQKTKEVGQKIENKAHE--GQVGRT 168          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO7_GOSHI (Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.249e-33
Identity = 82/163 (50.31%), Postives = 103/163 (63.19%), Query Frame = -3
Query:  298 MAERDRXXXXXXXXXXXXHGKSLMGQRGAAGGGPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAGGKT 786
            MA+RDR              + + G R     GPS ++VL VL +LP+GGT LALAG+ LTGT+IGLC+ TPLF+IFS             V GFL+SGAFGLT LSSLS+V +  RQ TG+    AD+AK+ +  M  YVGQKTKE GQ I++K HE GG+T
Sbjct:    1 MADRDRSYRTFD--------QVVRGDRTNYQSGPSTTQVLTVLTLLPIGGTLLALAGLTLTGTVIGLCMATPLFVIFSPVLVPAAIAVFMAVAGFLSSGAFGLTGLSSLSYVFNRFRQATGTEQLDADRAKRGMQDMVGYVGQKTKETGQTIENKAHE-GGRT 154          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO5_ARATH (Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 4.158e-29
Identity = 62/126 (49.21%), Postives = 87/126 (69.05%), Query Frame = -3
Query:  313 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 690
            GPS+++VLAV   +P+GGT L +AG+ L G++IGL +  PLF+IFS             +TGFL SGA GLT LSS+SWVL+ +R+    +PE  ++AK R+A MA+YVGQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVFVGVPIGGTLLTIAGLTLAGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAGQHIPEELEEAKHRLADMAEYVGQRTKDAGQTIEDKAHD 156          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO4_ARATH (Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.264e-29
Identity = 64/127 (50.39%), Postives = 85/127 (66.93%), Query Frame = -3
Query:  310 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEA 690
            GPS +++LA++A +P+GGT L LAG+ L G++IGL V+ PLF++FS             VTG L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y G K KE+GQ +Q K HEA
Sbjct:   46 GPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAALTIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGKEMGQYVQDKAHEA 172          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO1_SOYBN (P24 oleosin isoform A OS=Glycine max PE=2 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.695e-28
Identity = 70/133 (52.63%), Postives = 86/133 (64.66%), Query Frame = -3
Query:  313 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKT-------KEVGQDIQSKVHE 690
            GP+ S+VLAVLA LP+GG  L LAG+ L GT+ GL V TPLF++FS             V GFLTSGAFGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   50 GPTTSQVLAVLAGLPVGGILLLLAGLTLAGTLTGLAVATPLFVLFSPVLVPATVAIGLAVAGFLTSGAFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 182          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLES1_BRANA (Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.520e-28
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = -3
Query:  313 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 690
            GPS+++VLAV+A +P+GGT L LAG+ L  ++IGL +  PLF+IFS             +TGF+ SGA GLT LSS+SWVL+ +R+    +P+  D+AK+R+A MA+Y GQ+TK+ GQ I+ K H+
Sbjct:   31 GPSSTQVLAVVAGVPVGGTLLTLAGLTLAVSVIGLILAFPLFLIFSPVIVPAAFVIGLAMTGFMASGAIGLTGLSSMSWVLNHIRRVRERIPDELDEAKQRLADMAEYAGQRTKDAGQTIEDKAHD 156          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLES2_BRANA (Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 7.842e-28
Identity = 62/135 (45.93%), Postives = 88/135 (65.19%), Query Frame = -3
Query:  310 GQRGAAGGGPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEA 714
            G+      GPS+++++A++  +P+GG+ LALAG+ L G++IGL ++ PLF++FS             VT  L SG FGLT LSS+SWVL+ LR  + +VPE  D AK+R+A    Y GQK KE+GQ +Q K HEA
Sbjct:   35 GRADYKSSGPSSNQIVALIVGVPVGGSLLALAGLTLAGSVIGLMLSVPLFLLFSPVIVPAAITIGLAVTAILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGQKGKEMGQYVQDKAHEA 169          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO2_SOYBN (P24 oleosin isoform B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 1.024e-27
Identity = 70/133 (52.63%), Postives = 85/133 (63.91%), Query Frame = -3
Query:  313 GPSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKT-------KEVGQDIQSKVHE 690
            GP+ S+VLAV+A LP+GG  L LAG+ L GT+ GL V TPLFIIFS             V GFLTSG FGLTALSS SW+L+ +R+   +   +A  AK  +A  A+YVGQKT       KEVGQDIQSK  +
Sbjct:   49 GPTTSQVLAVVAGLPVGGILLLLAGLTLAGTLTGLVVATPLFIIFSPVLIPATVAIGLAVAGFLTSGVFGLTALSSFSWILNYIRETQPASENLAAAAKHHLAEAAEYVGQKTKEVGQKTKEVGQDIQSKAQD 181          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO_HELAN (Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.338e-27
Identity = 63/126 (50.00%), Postives = 80/126 (63.49%), Query Frame = -3
Query:  307 SASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHEAG 684
            S S+ LA++A+LP+GG  L LA +   GT+IGL + TPLF+IFS             VTGFL SG FGLT LSSLS++ +++RQ  GSVPE  D  K  +    +Y GQKTK+ GQ IQS  HE G
Sbjct:   32 STSRTLAIIALLPVGGILLGLAALTFIGTLIGLALATPLFVIFSPIIVPAVLTIGLAVTGFLASGTFGLTGLSSLSYLFNMVRQTAGSVPESLDYVKGTLQDAGEYAGQKTKDFGQKIQSTAHEMG 157          
BLAST of CV712677 vs. ExPASy Swiss-Prot
Match: OLEO2_ARATH (Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40420 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.132e-26
Identity = 64/143 (44.76%), Postives = 89/143 (62.24%), Query Frame = -3
Query:  313 GQRGAAGGG---------PSASKVLAVLAMLPLGGTFLALAGVALTGTIIGLCVTTPLFIIFSXXXXXXXXXXXXXVTGFLTSGAFGLTALSSLSWVLSILRQKTGSVPEMADQAKKRVAGMADYVGQKTKEVGQDIQSKVHE 714
            G RG  GGG         PS+++VL++L  +P+ G+ LALAG+ L G++IGL V  PLF++FS             +TGFL SG FGLT LSS+SWV++ LR    +VPE  + AK+R+A    Y GQK KE+GQ +Q+K  +
Sbjct:   31 GDRGYGGGGYKSMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAALTIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGKEMGQHVQNKAQD 173          
The following BLAST results are available for this feature:
BLAST of CV712677 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
OLEO6_GOSHI8.651e-3560.45Oleosin 18.2 kDa OS=Gossypium hirsutum GN=MATP6-A ... [more]
OLEO7_GOSHI1.249e-3350.31Oleosin 16.4 kDa OS=Gossypium hirsutum GN=MATP7 PE... [more]
OLEO5_ARATH4.158e-2949.21Oleosin 5 OS=Arabidopsis thaliana GN=At3g01570 PE=... [more]
OLEO4_ARATH9.264e-2950.39Oleosin 20.3 kDa OS=Arabidopsis thaliana GN=OL2 PE... [more]
OLEO1_SOYBN2.695e-2852.63P24 oleosin isoform A OS=Glycine max PE=2 SV=2[more]
OLES1_BRANA3.520e-2848.41Oleosin S1-2 OS=Brassica napus GN=S1 PE=1 SV=1[more]
OLES2_BRANA7.842e-2845.93Oleosin S2-2 OS=Brassica napus GN=S2 PE=1 SV=1[more]
OLEO2_SOYBN1.024e-2752.63P24 oleosin isoform B OS=Glycine max PE=2 SV=1[more]
OLEO_HELAN1.338e-2750.00Oleosin (Fragment) OS=Helianthus annuus PE=2 SV=1[more]
OLEO2_ARATH1.132e-2644.76Oleosin 21.2 kDa OS=Arabidopsis thaliana GN=At5g40... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001L23_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001L23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712677 ID=CV712677; Name=CV712677; organism=Citrus sinensis; type=EST; length=836bp
ATTTCGAACTAAATTTAGCAAATGGGAAGATACAAGACAACAACTGAGAC
AATACATAGCATATTCAAATTCTAGATAATTAAACCCAAAAACAAAAGCA
CCAAATGCCTTGCATTCCAAGTAAGCCCAAGAGCCAAACCCTTGCACCTC
ACAAGCCACAACAGAGTACGGACTCTCCTACAACTAAATACACAAAACTT
ATTACAACTACAAAACCAACACTAAAGCCCTAAAAAGAAACCACACATTG
TCTTCCCCATCAACCGATCATATCAGATCAACATTTTATGTCCTCCCCGT
CTTCCCTCCTGCTTCATGAACCTTACTCTGAATATCCTGCCCAACTTCCT
TAGTCTTCTGGCCCACATAATCCGCCATTCCCGCCACCCGCTTCTTCGCC
TGGTCCGCCATCTCCGGCACCGACCCAGTCTTCTGCCGCAATATGCTCAG
GACCCACGAGAGCGAAGACAAGGCCGTCAGCCCGAAAGCCCCCGACGTTA
AAAACCCAGTCACTGCAAGAGCAAGAACAATGGCGGCGGGGACAATAACG
GGGCTGAAGATTATGAAGAGAGGAGTGGTGACGCAAAGCCCGATGATGGT
TCCAGTCAGCGCGACACCGGCAAGAGCAAGAAAGGTTCCACCGAGGGGCA
GCATGGCCAAAACTGCAAGAACTTTGCTTGCTGAAGGGCCTCCTCCTGCT
GCTCCTCTTTGGCCCATAAGAGACTTACCGTGCTGTTGTGGGTGCACTTG
AAGCTGGTGTGGCTGCGGGCGATCGCGTTCAGCCATTGAGATGCTTAATT
CAAGAGTAAAGAGAGAAATATCGAGCAGTAAATCCT
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