CV712666
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RM02_ARATH (60S ribosomal protein L2, mitochondrial OS=Arabidopsis thaliana GN=RPL2 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.519e-64 Identity = 142/209 (67.94%), Postives = 158/209 (75.60%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGVQMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPGLMAADVNAMVSIPSSKSPFTTTSD---SKGAGGKSKITCAKDVFFSAFSSPMASGETASLS------YPRMAVAGAKPTFFAPR 757 RALRQFTL GKSAGRNSSGRIT+FHRGGGSKRL RRIDLKR+TSS+GIVE +EYDPNRSS IAPVRWI+G QKK NTIE+F PP RK EPTT ISG FSFSFL VD+RKVA FSPGLMAA V +V +P+ P +++ SKGAG S T KDVFFSAFSSP A ETASL+ +PR+AVAGAKP FFAPR Sbjct: 7 RALRQFTLSTGKSAGRNSSGRITVFHRGGGSKRLLRRIDLKRSTSSMGIVESIEYDPNRSSQIAPVRWIKG--GCQKKMNTIEKFAPP--RKILEPTTNTISGLFSFSFLPGKVDKRKVACFSPGLMAAYV--VVGLPTGMPPLSSSKSAFASKGAG--STKTLVKDVFFSAFSSPKAKRETASLAFASSFGFPRIAVAGAKPAFFAPR 207
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RM02_ORYSJ (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. japonica GN=RPL2 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37 Identity = 89/126 (70.63%), Postives = 97/126 (76.98%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPG 532 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFG 131
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RM02_ORYSI (60S ribosomal protein L2, mitochondrial OS=Oryza sativa subsp. indica GN=RPL2 PE=2 SV=2) HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37 Identity = 89/126 (70.63%), Postives = 97/126 (76.98%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPG 532 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFG 131
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RM02_ORYSA (60S ribosomal protein L2, mitochondrial OS=Oryza sativa GN=RPL2 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.212e-37 Identity = 89/126 (70.63%), Postives = 97/126 (76.98%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGV-QMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFLSQNVDQRKVASFSPG 532 RALR FTL GKSAGRNSSGRIT+FHRGGGSKRLQR+IDLKR+TSSIGIVER+EYDPNRSS IA VRWIEGV +Q+K TIEEF P RK E TTA I FSFS LS + Q + AS S G Sbjct: 8 RALRHFTLSTGKSAGRNSSGRITVFHRGGGSKRLQRKIDLKRSTSSIGIVERIEYDPNRSSRIALVRWIEGVLPGRQRKFKTIEEFALP--RKILESTTATIFCLFSFSSLSSPLAQGETASLSFG 131
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 123.635 bits (309), Expect = 1.137e-27 Identity = 88/204 (43.14%), Postives = 107/204 (52.45%), Query Frame = 2 Query: 158 RALRQFTLG-KGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSIGIVERVEYDPNRSSWIAPVRWIEGVQMQQKKCNTIEEFDPPPLRKFFEPTTAAISGKFSFSFL---SQNVDQRKVASFSPGLMAADVNAMVSIPSSKSPFTTTSDSKGAGGKSKITCAKDVFFSAFSSPMASGETASLSYPRMAVAGAKPTFFAPR 757 +AL+Q T K SAGRNSSGRIT+FHRGGGSKRLQR+ID KR+TSS+GIVER+EYDPNRSSWIA VRWIEGV K+ + FF FSFS L +Q + K + P + + ++ T D + AK+V S L P +AVAGAKP FFA R Sbjct: 9 KALKQLTFHLKRNSAGRNSSGRITVFHRGGGSKRLQRKIDFKRSTSSMGIVERIEYDPNRSSWIALVRWIEGVLRPGKRLAFSKANSRREKNMFF------FGLLFSFSSLPRQAQRIKYEKTRALRPCEQILESSWVLG----------TRDLR----------AKEVSLGPLGS--------FLGLPSIAVAGAKPAFFAFR 178
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICM5 (50S ribosomal protein L2 OS=Rickettsia massiliae (strain Mtu5) GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICFE (50S ribosomal protein L2 OS=Rickettsia felis GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICCN (50S ribosomal protein L2 OS=Rickettsia conorii GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICAE (50S ribosomal protein L2 OS=Rickettsia africae (strain ESF-5) GN=rplB PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L+ T G K+ GRN+ GRIT +HRGGG K+L R ID KR I IVER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGISKTGGRNNQGRITSWHRGGGHKKLYRIIDFKRNKIDISAIVERIEYDPNRTAFIALIKYEDG 99
BLAST of CV712666 vs. ExPASy Swiss-Prot
Match: RL2_RICTY (50S ribosomal protein L2 OS=Rickettsia typhi GN=rplB PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13 Identity = 37/72 (51.39%), Postives = 50/72 (69.44%), Query Frame = 2 Query: 158 RALRQFTLGKGKSAGRNSSGRITIFHRGGGSKRLQRRIDLKRTTSSI-GIVERVEYDPNRSSWIAPVRWIEG 370 R L+ T G K+ GRN GRIT +HRGGG K+L R ID KR I +VER+EYDPNR+++IA +++ +G Sbjct: 28 RPLKSLTKGMSKTGGRNQQGRITSWHRGGGHKKLYRVIDFKRKKIDIFAVVERIEYDPNRTAFIALIKYDDG 99 The following BLAST results are available for this feature:
BLAST of CV712666 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 90
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712666 ID=CV712666; Name=CV712666; organism=Citrus sinensis; type=EST; length=759bpback to top |