CX043566

Overview
NameCX043566
Unique NameCX043566
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT4_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 OS=Arabidopsis thaliana GN=LPAT4 PE=2 SV=1)

HSP 1 Score: 328.946 bits (842), Expect = 1.517e-89
Identity = 155/215 (72.09%), Postives = 183/215 (85.12%), Query Frame = 3
Query:   48 MEECRPLKCDNRLKRRPLTPIRVFRGLICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            ME C  LK DN LK RPLTP+R+ RGL+ LLVF  TAFMFL+YFAPI A+ LR+ SV   RK  S +FGLWLALWP+LFE +N T +VFSGDI+PVE+RVLL+ANHRTEVDWMY+W++ALRKGCLGYIKY+LKSSLMKLP+FGWGFH+LEFI VER  E+DE V+ QMLS+F++P +PLWL +FPEGTDFTEEK  RSQKFAA+VGLP L+NVLL
Sbjct:    1 MEVCGDLKSDN-LKNRPLTPLRILRGLMILLVFLSTAFMFLLYFAPIAALGLRLLSVQQSRKVVSLIFGLWLALWPYLFETVNGTTVVFSGDIIPVEKRVLLIANHRTEVDWMYLWNIALRKGCLGYIKYVLKSSLMKLPIFGWGFHVLEFIPVERKREVDEPVLLQMLSSFKDPQEPLWLALFPEGTDFTEEKCKRSQKFAAEVGLPALSNVLL 214          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT5_ARATH (Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 OS=Arabidopsis thaliana GN=LPAT5 PE=2 SV=1)

HSP 1 Score: 285.419 bits (729), Expect = 1.924e-76
Identity = 130/198 (65.66%), Postives = 163/198 (82.32%), Query Frame = 3
Query:   99 LTPIRVFRGLICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            L+ IRV RG+ICL+V   TAFM L+++  + A++LR+FS+ + RK  SF FG WLALWPFLFEKIN+T ++FSGD VP E+RVLL+ANHRTEVDWMY WDLALRKG +G IKY+LKSSLMKLP+FGW FH+ EFI VER WE+DE  +RQ++S+F++P D LWL +FPEGTD+TE K  RS+KFAA+ GLP+L NVLL
Sbjct:   12 LSLIRVLRGIICLMVLVSTAFMMLIFWGFLSAVVLRLFSIRYSRKCVSFFFGSWLALWPFLFEKINKTKVIFSGDKVPCEDRVLLIANHRTEVDWMYFWDLALRKGQIGNIKYVLKSSLMKLPLFGWAFHLFEFIPVERRWEVDEANLRQIVSSFKDPRDALWLALFPEGTDYTEAKCQRSKKFAAENGLPILNNVLL 209          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LCLT1_DANRE (Lysocardiolipin acyltransferase 1 OS=Danio rerio GN=lclat1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.019e-25
Identity = 69/188 (36.70%), Postives = 94/188 (50.00%), Query Frame = 3
Query:  129 ICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGD-IVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVL 689
            +C L+F     +F   F     + L + S    R  T  +   WL L   L E +    +V +GD  +P E  V++M NHRT +DWM++W   LR   L   K  LK++L  +P FGW   +  FI ++R WE D   M  ML  F    +P+ L +FPEGTD TE  R RS +FA   GL     VL
Sbjct:    7 VCFLLFLLLGSVFGSVFMLGPLLPLMLLSPSRYRWITDRIVATWLTLPVALLELVLGVKVVVTGDGFIPGERSVIIM-NHRTRLDWMFLWCCLLRYSYLRQEKICLKAALKSVPGFGWAMQVASFIFIQRRWEDDRTHMSNMLQYFCRIREPVQLLLFPEGTDLTENTRARSDEFAEKNGLQKYEYVL 193          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LCLT1_MOUSE (Lysocardiolipin acyltransferase 1 OS=Mus musculus GN=Lclat1 PE=2 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.637e-25
Identity = 68/192 (35.42%), Postives = 99/192 (51.56%), Query Frame = 3
Query:  117 FRGLICLLVFFFTAFMFLVYF-APIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVL 689
            ++G+  +L  F  +F   ++   PI+ ++    S +  R  +S L   WL L   L E +    +V +GD     ER +++ NHRT VDWM++W+  +R   L   K  LKSSL  +P FGW   +  FI + R W+ D+     M+  F   ++PL L IFPEGTD TE  + RS  FA   GL     VL
Sbjct:    4 WKGIYFILFLFAGSFFGSIFMLGPILPLMFINLSWY--RWISSRLVATWLTLPVALLETMFGVRVVITGDAFVPGERSVIIMNHRTRVDWMFLWNCLMRYSYLRVEKICLKSSLKSVPGFGWAMQVAAFIFIHRKWKDDKSHFEDMIDYFCAIHEPLQLLIFPEGTDLTENNKARSNDFAEKNGLQKYEYVL 193          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LCLT1_CHICK (Lysocardiolipin acyltransferase 1 OS=Gallus gallus GN=LCLAT1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.709e-24
Identity = 67/175 (38.29%), Postives = 91/175 (52.00%), Query Frame = 3
Query:  147 FFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGD-IVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGL 668
            FF +   L  F P++ I    +     R  T  +   WL L   L E +    +V +GD  +P E  V++M NHRT +DWM++W+  LR   L   K  LKSSL  +P FGW   +  FI ++R WE D+     ML  F + ++PL L IFPEGTD T   + RS  FA   GL
Sbjct:   18 FFGSIFMLGPFLPLMFISPAWY-----RWITDRIVATWLTLPVALLEMVFGAKVVVTGDGFIPGERSVIIM-NHRTRMDWMFLWNCLLRYSYLRLEKICLKSSLKSIPGFGWAMQVAAFIFIQRKWEDDKSHFENMLHYFCDIHEPLQLLIFPEGTDLTANTKARSNDFAEKNGL 186          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT2_ARATH (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Arabidopsis thaliana GN=LPAT2 PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.890e-23
Identity = 64/196 (32.65%), Postives = 101/196 (51.53%), Query Frame = 3
Query:  126 LICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFG-LWLAL------WPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            ++ L + FF + + +  F  +  +++R  S +  RK    +   LWL L      W  +  ++   N  F+      +E  L++ NHR+++DW+  W LA R GCLG    ++K S   LPV GW     E++ +ERNW  DE  ++  L    +   P WL +F EGT FTE K   +Q++AA   LP+  NVL+
Sbjct:    8 IVPLGLLFFISGLAVNLFQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADNETFNR---MGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLSDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPIPRNVLI 200          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LCLT1_HUMAN (Lysocardiolipin acyltransferase 1 OS=Homo sapiens GN=LCLAT1 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.468e-23
Identity = 62/192 (32.29%), Postives = 100/192 (52.08%), Query Frame = 3
Query:  117 FRGLICLLVFFFTAFMFLVYF-APIIAIILRMFSVHHCRKATSFLFGLWLALWPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVL 689
            ++G+  +L  F+ +F   ++  +P + ++    S +  R   + L   WL L   L E +    ++ +GD     ER +++ NHRT +DWM++W+  +R   L   K  LK+SL  +P FGW      +I + R W+ D+     M+  F + ++PL L IFPEGTD TE  ++RS  FA   GL     VL
Sbjct:   42 WKGIYFILTLFWGSFFGSIFMLSPFLPLMFVNPSWY--RWINNRLVATWLTLPVALLETMFGVKVIITGDAFVPGERSVIIMNHRTRMDWMFLWNCLMRYSYLRLEKICLKASLKGVPGFGWAMQAAAYIFIHRKWKDDKSHFEDMIDYFCDIHEPLQLLIFPEGTDLTENSKSRSNAFAEKNGLQKYEYVL 231          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT2_BRAOL (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica oleracea GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23
Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 3
Query:  126 LICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFG-LWLALWPFLFEKINRTNMVFSGDIV---PVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            ++ L + FF + + +     +  +++R  S +  RK    +   LWL L   +         VF+ D       +E  L++ NHR+++DW+  W LA R GCLG    ++K S   LPV GW     E++ +ERNW  DE  ++  L    +   P WL +F EGT FTE K   +Q++AA   LPV  NVL+
Sbjct:    9 IVPLGILFFISGLVVNLLQAVCYVLIRPLSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLKSGLQRLNDFPRPFWLALFVEGTRFTEAKLKAAQEYAATSQLPVPRNVLI 201          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT2_BRANA (1-acyl-sn-glycerol-3-phosphate acyltransferase 2 OS=Brassica napus GN=LPAT2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.379e-23
Identity = 64/193 (33.16%), Postives = 98/193 (50.78%), Query Frame = 3
Query:  126 LICLLVFFFTAFMFLVYFAPIIAIILRMFSVHHCRKATSFLFG-LWLALWPFLFEKINRTNMVFSGDIV---PVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            ++ L + FF + + +     +  +++R  S +  RK    +   LWL L   +         VF+ D       +E  L++ NHR+++DW+  W LA R GCLG    ++K S   LPV GW     E++ +ERNW  DE  ++  L    +   P WL +F EGT FTE K   +Q++AA   LPV  NVL+
Sbjct:    8 IVPLGILFFISGLVVNLLQAVCYVLVRPMSKNTYRKINRVVAETLWLELVWIVDWWAGVKIQVFADDETFNRMGKEHALVVCNHRSDIDWLVGWILAQRSGCLGSALAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDESTLQSGLQRLNDFPRPFWLALFVEGTRFTEAKLKAAQEYAASSELPVPRNVLI 200          
BLAST of CX043566 vs. ExPASy Swiss-Prot
Match: LPAT_MAIZE (1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 OS=Zea mays GN=PLS1 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.564e-22
Identity = 59/176 (33.52%), Postives = 92/176 (52.27%), Query Frame = 3
Query:  186 IIAIILRMFSVHHCRKATSFLFGL-WLAL------WPFLFEKINRTNMVFSGDIVPVEERVLLMANHRTEVDWMYVWDLALRKGCLGYIKYILKSSLMKLPVFGWGFHILEFISVERNWEIDEHVMRQMLSTFRNPNDPLWLTIFPEGTDFTEEKRNRSQKFAADVGLPVLTNVLL 692
            ++ + +R FS    R+   FL  L WL L      W  +  +++     +       +E  L+++NHR+++DW+  W LA R GCLG    ++K S   LPV GW     E++ +ER+W  DE  ++  L   ++   P WL +F EGT FT  K   +Q++AA  GLP   NVL+
Sbjct:   29 VLFVTIRPFSKSFYRRINRFLAELLWLQLVWVVDWWAGVKVQLHADEETYRS---MGKEHALIISNHRSDIDWLIGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFAEYLFLERSWAKDEKTLKWGLQRLKDFPRPFWLALFVEGTRFTPAKLLAAQEYAASQGLPAPRNVLI 201          
The following BLAST results are available for this feature:
BLAST of CX043566 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
LPAT4_ARATH1.517e-8972.09Probable 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
LPAT5_ARATH1.924e-7665.66Probable 1-acyl-sn-glycerol-3-phosphate acyltransf... [more]
LCLT1_DANRE2.019e-2536.70Lysocardiolipin acyltransferase 1 OS=Danio rerio G... [more]
LCLT1_MOUSE2.637e-2535.42Lysocardiolipin acyltransferase 1 OS=Mus musculus ... [more]
LCLT1_CHICK1.709e-2438.29Lysocardiolipin acyltransferase 1 OS=Gallus gallus... [more]
LPAT2_ARATH1.890e-2332.651-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LCLT1_HUMAN2.468e-2332.29Lysocardiolipin acyltransferase 1 OS=Homo sapiens ... [more]
LPAT2_BRAOL7.181e-2333.161-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT2_BRANA9.379e-2333.161-acyl-sn-glycerol-3-phosphate acyltransferase 2 O... [more]
LPAT_MAIZE3.564e-2233.521-acyl-sn-glycerol-3-phosphate acyltransferase PLS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11H12_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11H12-O23-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043566 ID=CX043566; Name=CX043566; organism=Citrus sinensis; type=EST; length=694bp
TTTTCAGATACGAGCTGTTCCAGGTTTATAGCAGTTCCTGGAAGGATATG
GAAGAATGCAGGCCTCTCAAGTGTGATAATAGATTAAAGCGCCGTCCTTT
GACTCCTATTAGGGTTTTCAGGGGTCTGATATGTTTATTGGTGTTCTTTT
TTACTGCTTTTATGTTTCTAGTGTATTTTGCACCCATTATTGCTATCATT
TTGAGGATGTTCAGCGTCCATCACTGTAGGAAAGCAACATCCTTCCTCTT
TGGTCTTTGGCTAGCTTTATGGCCTTTTCTATTTGAAAAGATTAACAGAA
CTAATATGGTTTTTTCTGGAGATATTGTCCCAGTAGAGGAACGTGTATTA
CTTATGGCCAATCACAGAACTGAGGTTGATTGGATGTACGTGTGGGATCT
TGCATTGCGGAAGGGGTGCCTGGGCTACATAAAATACATCCTTAAGAGCA
GCTTGATGAAATTACCAGTCTTTGGTTGGGGATTTCACATTTTGGAGTTT
ATTTCAGTGGAAAGGAATTGGGAAATTGATGAACATGTCATGCGCCAAAT
GCTTTCTACTTTTAGGAATCCCAATGATCCTTTGTGGCTTACAATTTTCC
CTGAAGGAACTGACTTTACTGAAGAGAAACGTAACAGGAGTCAGAAATTT
GCAGCTGATGTTGGACTTCCTGTGCTTACTAATGTGCTGCTTCC
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