CV712179

Overview
NameCV712179
Unique NameCV712179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2916 contig Csv1_Contig2916:13..641. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of CV712179 vs. ExPASy Swiss-Prot
Match: YCF68_EUCGG (Uncharacterized protein ycf68 OS=Eucalyptus globulus subsp. globulus GN=ycf68-1 PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 5.053e-34
Identity = 43/44 (97.73%), Postives = 44/44 (100.00%), Query Frame = -2
Query:  167 LRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 298
            +RRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG
Sbjct:    1 MRRCAWAVRALSHMDSSMCSSAPDPEMWIIQGTLAWRTSPVRTG 44          

HSP 2 Score: 69.3218 bits (168), Expect = 5.053e-34
Identity = 35/53 (66.04%), Postives = 36/53 (67.92%), Query Frame = -1
Query:    9 GFENKLLLRRIDGAIQVRSNVDPTFYSLVXXXXXXXXXXXXXXXDNPYIPYQC 167
            GFE K LLRRIDGAIQVRSNVDPTFYSLV               +NPYIPYQC
Sbjct:   44 GFETKPLLRRIDGAIQVRSNVDPTFYSLVGSGRSGGDPHGSSLLENPYIPYQC 96          
The following BLAST results are available for this feature:
BLAST of CV712179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YCF68_EUCGG5.053e-3497.73Uncharacterized protein ycf68 OS=Eucalyptus globul... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A13_f Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712179 ID=CV712179; Name=CV712179; organism=Citrus sinensis; type=EST; length=629bp
GCTGTCCTACACTGATAAGGGATGTATGGATTATCGAGAAGAGAGGAGCC
GTGGTGGTCCCCCCCGGACCGCCCGGATCCCACGAGTGAATAGAAAGTTG
GATCTACATTGGATCTCACCTGAATCGCCCCATCTATCCTCCTGAGGAGG
AGTTTGTTTTCAAACCCCCGGTTCGAACAGGAGAAGTACGCCATGCTAAT
GTGCCTTGGATGATCCACATCTCAGGGTCAGGCGCTGATGAGCACATTGA
ACTATCCATGTGGCTGAGAGCCCTCACAGCCCAGGCACAACGACGCAATT
ATCAGGGGCGCGCTCTACCACTGAGCTAATAGCCCGTCGTGCGGGCCTCC
CGCTGGGGGCCCACTATGCCAAAAGCGAGAGAAACCCCATCCCTCTCTTT
CCTTTTTACGCCCCCAGGTCCCTCCCGTGTGGCGACATGGGGGCGTAAAA
GGGGGATCCTATCAACTTGTTCCGACCTAGGATAATAAGCTCATGGGCTT
GGTCTTACTTCACCGTCGAGAAACGAAAGAAGACTTCCATCTCCAAGTTT
AACTCAGGCGTAGCTCGCTTCTTTTTGGGTGTGAAGCGGTGTCAAACCAA
AATACCCAACAAGCATTAGCTCTCCCTGA
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