CV712174

Overview
NameCV712174
Unique NameCV712174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:292..998. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.455e-34
Identity = 74/146 (50.68%), Postives = 97/146 (66.44%), Query Frame = 3
Query:   18 PSILPSDPYDRAVARFWAAYVDEKLFPA-LKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKLAEFAKVLAKLRAS 449
            PS++PSDPY+RAVARFWAAYVD+K+ PA L  +  +   E + AA+ Q +  L  LE AF +CSKGKPFFGG  +GF+D+  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P + DKL EF + L +  AS
Sbjct:   88 PSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFRQTLLRWSAS 233          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.612e-25
Identity = 58/144 (40.28%), Postives = 87/144 (60.42%), Query Frame = 3
Query:    6 SSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQI--GFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 431
            + +G  +LP DPY+RA+ RFW A++D+K +PAL ++  A    A+  A E     L LLE+AF   S G+ FF G     G LD+A GC+L  +R  E++  + L+D   TP L  W++RF A  A K V+P+T+K+ +F + L
Sbjct:   82 AEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTRFL 225          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.663e-20
Identity = 57/143 (39.86%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    3 WSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 431
            W    P++LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       KP+FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   79 WKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.749e-20
Identity = 56/143 (39.16%), Postives = 76/143 (53.15%), Query Frame = 3
Query:    3 WSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAKVL 431
            W    PS+LPSDPYDRA ARFWA Y+D+KL+   + + +  G E +EAA +  IE L +LE A       +P+FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+ EF KVL
Sbjct:   79 WKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVL 214          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.253e-18
Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 3
Query:   24 ILPSDPYDRAVARFWAAYVDEKLFPAL-KSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEFAK 425
            ILPSDPY RA+ARFW+ ++D+K+  A+ KS+ + D  E +E  +E+  E L  LE+      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L  + K
Sbjct:   86 ILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.786e-16
Identity = 50/135 (37.04%), Postives = 73/135 (54.07%), Query Frame = 3
Query:   15 GPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 419
            GPSILP DPYDRA+ARFWA ++D+K+   +K+       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   KW   +   + +K+ +P  D+L  F
Sbjct:   79 GPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.975e-15
Identity = 48/135 (35.56%), Postives = 71/135 (52.59%), Query Frame = 3
Query:   15 GPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 419
            GPSILP DPYDRA+ARFWA ++D+K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+     L+   K P   KW + +   + V + +P  D+L  F
Sbjct:   79 GPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.580e-15
Identity = 51/149 (34.23%), Postives = 78/149 (52.35%), Query Frame = 3
Query:   15 GPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL-----AEFAKVLAKLRA 446
            GPSILP DPYDRA+ARFW+ ++ +K+   + +       E +E   E++ E L +L++      K K FF G + GF DIA      W+ V E+   V L+   K P   +W + +   + VK+ +P  D+L     A F  V+A + A
Sbjct:   79 GPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAFFRARFQAVVASISA 221          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.298e-14
Identity = 48/132 (36.36%), Postives = 68/132 (51.52%), Query Frame = 3
Query:   15 GPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 410
            GPSILP DPYDRA+ARFWA YV++K     KS  S    E +E A E+  E L +L++ F    K K  F G + GF DI       ++ + E++  + L    K P    W + +C     ++  P  D+L
Sbjct:   79 GPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFSK--GEEQEKAKEEAYEMLKILDNEF----KDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
BLAST of CV712174 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.153e-13
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 3
Query:    3 WSSSGPSILPSDPYDRAVARFWAAYVDEKLFPALKSIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGKPFFGGSQIGFLDIAFGCYLGWVRVTEKMIEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAEF 419
            W    P +LPSDPY+R+ ARFWA Y+D+K++   + + S  G E +E A ++ IE L  LE         K +FGG  +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:   79 WHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
The following BLAST results are available for this feature:
BLAST of CV712174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
GSTU6_ORYSJ1.455e-3450.68Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX2_MAIZE1.612e-2540.28Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX4_TOBAC2.663e-2039.86Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC7.749e-2039.16Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX6_SOYBN7.253e-1837.04Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX1_TOBAC1.786e-1637.04Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC1.975e-1535.56Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC2.580e-1534.23Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_SOLTU8.298e-1436.36Probable glutathione S-transferase OS=Solanum tube... [more]
GSTXA_TOBAC3.153e-1333.09Probable glutathione S-transferase parA OS=Nicotia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_0001A10_r Parent Washington Navel Orange Callus cDNA Library UCRCS08-1 Citrus sinensis cDNA clone CS_AEa0001A10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CV712174 ID=CV712174; Name=CV712174; organism=Citrus sinensis; type=EST; length=707bp
CTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTGATCCTTATGACCGT
GCCGTTGCTCGTTTCTGGGCCGCTTATGTTGATGAGAAGTTGTTCCCTGC
CTTGAAAAGCATTGGTAGTGCAGATGGAGCGGAAGCTAAGGAAGCTGCGA
TTGAGCAATTGATTGAAGGCTTGGTTTTGCTGGAGGATGCTTTTGTTAAG
TGTAGCAAAGGGAAGCCTTTCTTTGGTGGAAGCCAAATTGGGTTTCTTGA
CATTGCATTTGGTTGCTACTTGGGATGGGTGAGAGTGACAGAGAAAATGA
TTGAGGTGAAGCTCCTTGATGAAGTCAAAACTCCTGGACTGTTCAAATGG
GCTGAGAGATTCTGTGCTGATGCCGCTGTCAAAGATGTTATGCCTGAGAC
TGATAAGCTTGCAGAGTTTGCTAAGGTTCTTGCCAAACTCAGAGCTTCTG
GCAAATGGAATTAAGAAGCTTAATTCTGTGCTTGGAGGGGCACAAAAAAA
AAGAAAAAAAAAAAAAAGAGTTGTTTCCAGAAATAAATTCGAATAAGAAT
TAAGTTTTGTTTTTGGTTTCGTTTGGAACGGTAAAGCCTGTATCATTTGG
GTTCTGTTATCGGGCTAGGCTGCAGCCTCTCTCGTAGACTCATGTATACC
AAGTGAAGGTATAAAGGTTATTGTGTTGTTTTTCTCCGCAGAAAAAAAAA
AAAAAAA
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