CN192485

Overview
NameCN192485
Unique NameCN192485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length711
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:376..1086. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.066e-85
Identity = 151/196 (77.04%), Postives = 173/196 (88.27%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 711
            PY+DS++ +KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  126 PYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 316.235 bits (809), Expect = 1.066e-85
Identity = 151/196 (77.04%), Postives = 173/196 (88.27%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 711
            PY+DS++ +KWHVFWVDERVVPKDH+DSNYKLA DGFLSKVPI TG VYAINDALSAEGAA+DYETCLK L K+ ++A S +TGFP+FD+MLLGMGPDGHIASLFPGHPL+ EN+KWVT+IKDSPKPPPERITFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA  ++ EFTWF DK A S L
Sbjct:  126 PYLDSVDWSKWHVFWVDERVVPKDHEDSNYKLALDGFLSKVPIPTGQVYAINDALSAEGAADDYETCLKQLVKNGVIAMSQSTGFPRFDVMLLGMGPDGHIASLFPGHPLVNENKKWVTYIKDSPKPPPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 294.664 bits (753), Expect = 3.320e-79
Identity = 140/194 (72.16%), Postives = 161/194 (82.99%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 711
            PYVDSI+ A+WH FWVDERVVPK+HDDSNYKLAYD FLSKVPI  GNVYAIN+ALSAE AA+DYETCLKHL  +NIL  S +TGFPKFDLMLLGMGPDGH+ASLFPGH L  E++KWV  I DSPKPP ERITFTFPVINSSA++A+VVCG+GK+ AV+ AL   +  ++ P    SAE+E  WFLDK A+SKL
Sbjct:  134 PYVDSIDWARWHFFWVDERVVPKNHDDSNYKLAYDSFLSKVPIPPGNVYAINEALSAEAAADDYETCLKHLVNTNILRVSESTGFPKFDLMLLGMGPDGHVASLFPGHGLCNESKKWVVSISDSPKPPSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGNVPPAGSVSAEDELVWFLDKPASSKL 325
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.436e-76
Identity = 135/196 (68.88%), Postives = 159/196 (81.12%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 711
            PY++++E +KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  129 PYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.436e-76
Identity = 135/196 (68.88%), Postives = 159/196 (81.12%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQ-NSDLLPVQMASAEE-EFTWFLDKDATSKL 711
            PY++++E +KWHVFWVDERVVPKDH DSNYKLA DG LSKVPI    +YAIND LSAEGAA++YETCLK L    ++A S  TGFPK DLMLLGMGPDGH+ASLFPGHP++ EN KWV++IKDSPKPPPERITFTFP++NSSA+IA+VV GAGK+ AV  A  + Q +SDLLPV+M S +E   TWF DK A S L
Sbjct:  129 PYLEAVEWSKWHVFWVDERVVPKDHADSNYKLAMDGLLSKVPIPASQIYAINDTLSAEGAADEYETCLKQLVNDGVVAISEVTGFPKLDLMLLGMGPDGHVASLFPGHPVVNENLKWVSYIKDSPKPPPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL2_ARATH (Probable 6-phosphogluconolactonase 2 OS=Arabidopsis thaliana GN=At3g49360 PE=2 SV=2)

HSP 1 Score: 232.261 bits (591), Expect = 2.024e-60
Identity = 114/198 (57.58%), Postives = 139/198 (70.20%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEG----AAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 711
            PY+DSIE +KWH+FWVDERV   DH DSNYKLAYDGFLSKVP+   N+YAI++ L AEG    AAE YE CLK     NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  + E  KWVT I DSPKPP +RIT T PVIN ++Y  M VC   ++ +V  AL + ++   LP    +A+ E  WFLD+ A SKL
Sbjct:   57 PYIDSIEWSKWHIFWVDERVCAWDHADSNYKLAYDGFLSKVPVPAENIYAIDNGLGAEGNAELAAERYEECLKQKVNQNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHAQINEKVKWVTSITDSPKPPSKRITLTLPVINCASYNVMAVCDKEQADSVAAALNHTKD---LPAGRLTADVEVVWFLDQAAASKL 251
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL3_ARATH (Probable 6-phosphogluconolactonase 3 OS=Arabidopsis thaliana GN=At5g24420 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.894e-58
Identity = 112/198 (56.57%), Postives = 138/198 (69.70%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 711
            PY+DSIE  KWHVFWVDERV   +  DSNYKLA +GFLSKVPI   N+YAI+  L+A+G AE     YE CLK+L K  I+  S  TG+P+FDL LLGMGPDGH+ASLFP HP + E +KWVT+I DSPKPPP+RITFT PVINS+ Y  M +C    + +V   + +N  S  LP    SA+ E  W+LD+ A S+L
Sbjct:   57 PYIDSIEWPKWHVFWVDERVCAWEDPDSNYKLAMEGFLSKVPIPDKNIYAIDKHLAADGNAEHCATLYEECLKNLVKEKIIPISKKTGYPEFDLQLLGMGPDGHMASLFPNHPQINEKQKWVTYITDSPKPPPKRITFTLPVINSTLYNLMAICDKAPAKSVAEIMKHNNLS--LPSAHLSAQVENVWYLDQAAASEL 252
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL4_ARATH (Probable 6-phosphogluconolactonase 4 OS=Arabidopsis thaliana GN=At5g24410 PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 1.603e-57
Identity = 110/197 (55.84%), Postives = 137/197 (69.54%), Query Frame = -1 
Query:  130 YVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAED----YETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNSDLLPVQMASAEEEFTWFLDKDATSKL 708
            Y +SIE +KWH+FWVDERVVP DH+DSNYKLA+DGFLSKVPI   N+Y I+   +A G A+     YE CLK L   NI+ T  ++GFP+FDL LLGMGPDGH+ASLFPGH  +KE    VT+I DSPKPPP+RITFT PVIN ++Y  M VC   ++ AV     +N +   LP    +A+ E  WFLD+ A SK+
Sbjct:   64 YQESIEWSKWHIFWVDERVVPLDHEDSNYKLAFDGFLSKVPIPIANIYPIDKDCAALGDAKSAALLYEECLKRLVNRNIIRTYKSSGFPQFDLQLLGMGPDGHMASLFPGHYQIKEKANLVTYITDSPKPPPKRITFTLPVINCASYNLMAVCDEAQADAVAKVFNHNFD---LPAAWLTADVEAIWFLDQAAASKI 257
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSJ (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. japonica GN=Os07g0604000 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 99/199 (49.75%), Postives = 133/199 (66.83%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 711
            PY  +++ +KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   68 PYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266
[Close]
BLAST of CN192485 vs. ExPASy Swiss-Prot
Match: 6PGL2_ORYSI (Probable 6-phosphogluconolactonase 2 OS=Oryza sativa subsp. indica GN=OsI_025867 PE=3 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.028e-52
Identity = 99/199 (49.75%), Postives = 133/199 (66.83%), Query Frame = -1 
Query:  130 PYVDSIEGAKWHVFWVDERVVPKDHDDSNYKLAYDGFLSKVPITTGNVYAINDALSAEGAAEDYETCLKHLTKSNILATSAATGFPKFDLMLLGMGPDGHIASLFPGHPLLKENEKWVTFIKDSPKPPPERITFTFPVINSSAYIAMVVCGAGKSSAVQTALGNNQNS----DLLPVQMAS-AEEEFTWFLDKDATSKL 711
            PY  +++ +KW++FW DER V K+H +SNY++  +GFLSKVPI  G+VY+IND  + E AA DYE  ++ L K   +  S +   PKFDL+LL MG DGH+ASLFP HP L+  + W+T+I DSP+PPPERITFT PVINS++ IA+V  G  KS AV  A+ +N +       LP +M    + +  WFLDK A S L
Sbjct:   68 PYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSL 266
The following BLAST results are available for this feature:
BLAST of CN192485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
6PGL4_ORYSJ1.066e-8577.04Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI1.066e-8577.04Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH3.320e-7972.16Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ3.436e-7668.88Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI3.436e-7668.88Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL2_ARATH2.024e-6057.58Probable 6-phosphogluconolactonase 2 OS=Arabidopsi... [more]
6PGL3_ARATH1.894e-5856.57Probable 6-phosphogluconolactonase 3 OS=Arabidopsi... [more]
6PGL4_ARATH1.603e-5755.84Probable 6-phosphogluconolactonase 4 OS=Arabidopsi... [more]
6PGL2_ORYSJ2.028e-5249.75Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]
6PGL2_ORYSI2.028e-5249.75Probable 6-phosphogluconolactonase 2 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006P14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006P14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192485 ID=CN192485; Name=CN192485; organism=Citrus sinensis; type=EST; length=711bp
ATTAACAGTTCACTCTTTTCTCATTACTAACAAAATCCAGCAGCCCTAGT
AGTCAAACCACACAGATCAAACCAATTATCATAGCAGATAACAGGGATTC
ACGCATACAGCTAATTGTTCCGACTCTTACAGCTTTGAAGTCGCGTCTTT
GTCAAGAAACCAAGTAAATTCTTCTTCAGCCGATGCCATTTGAACTGGCA
GCAAATCAGAGTTTTGATTATTACCCAATGCAGTTTGAACTGCACTTGAT
TTTCCAGCACCACACACCACCATTGCAATATATGCAGATGAGTTGATTAC
AGGGAAGGTGAAAGTGATTCTCTCTGGAGGTGGCTTTGGCGAGTCTTTAA
TGAAAGTAACCCATTTTTCATTCTCCTTGAGAAGAGGATGCCCTGGAAAC
AGAGAAGCTATGTGTCCATCTGGACCCATACCCAGAAGCATGAGATCAAA
CTTTGGAAAACCAGTAGCAGCAGATGTAGCTAATATATTGCTCTTTGTCA
AATGCTTGAGACAAGTCTCATAATCTTCAGCTGCACCTTCAGCAGATAAT
GCATCATTGATGGCATAGACATTGCCAGTGGTAATTGGTACCTTAGAAAG
GAAACCATCATAAGCAAGCTTATAATTGCTATCATCATGATCCTTGGGAA
CAACTCTTTCATCAACCCAAAACACATGCCATTTCGCCCCTTCAATTGAA
TCTACATACGG
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