CN191755

Overview
NameCN191755
Unique NameCN191755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length334
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2287 contig Csv1_Contig2287:159..492. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AAT2_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 1 OS=Arabidopsis thaliana GN=ASP2 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 2.570e-27
Identity = 57/65 (87.69%), Postives = 61/65 (93.85%), Query Frame = -3
Query:  138 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRMG 332
            GDWS IIKQIGMFTFTGLN EQV FMTKE+HIYMTSDGRISMAGLSSK+VPHL DA+HAAVTR+G
Sbjct:  341 GDWSHIIKQIGMFTFTGLNKEQVEFMTKEFHIYMTSDGRISMAGLSSKTVPHLADAMHAAVTRLG 405          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_DAUCA (Aspartate aminotransferase, cytoplasmic OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.269e-26
Identity = 54/62 (87.10%), Postives = 58/62 (93.55%), Query Frame = -3
Query:  147 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVT 332
            GDWS I+KQIGMFTFTGLNSEQV FMT EYHIY+TSDGRISMAGLSS++VPHL DAIHAAVT
Sbjct:  341 GDWSHIVKQIGMFTFTGLNSEQVTFMTNEYHIYLTSDGRISMAGLSSRTVPHLADAIHAAVT 402          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AAT3_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP3 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.269e-26
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = -3
Query:  144 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTR 332
            GDWS IIKQIGMFTFTGLN  QV+FMTKEYHIYMTSDGRISMAGLSSK+VPHL DAIHA VT+
Sbjct:  385 GDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLSSKTVPHLADAIHAVVTK 447          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_ORYSJ (Aspartate aminotransferase, cytoplasmic OS=Oryza sativa subsp. japonica GN=Os01g0760600 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.080e-25
Identity = 53/64 (82.81%), Postives = 60/64 (93.75%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            GDWS IIKQIGMFTFTGLNS+QVAFM +EYHIYMTSDGRISMAGLS +++PHL DAIHAAVT++
Sbjct:  343 GDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLSGRTIPHLADAIHAAVTKL 406          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AAT1_MEDSA (Aspartate aminotransferase 1 OS=Medicago sativa GN=AAT-1 PE=2 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 9.142e-25
Identity = 53/64 (82.81%), Postives = 58/64 (90.62%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            GDWS IIKQIGMFTFTGLN EQV+ +TKEYHIY+TSDGRISMAGLSSK+VPHL  AIHA VTR+
Sbjct:  354 GDWSHIIKQIGMFTFTGLNPEQVSILTKEYHIYLTSDGRISMAGLSSKTVPHLAHAIHAVVTRV 417          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AAT4_ARATH (Aspartate aminotransferase, cytoplasmic isozyme 2 OS=Arabidopsis thaliana GN=ASP4 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.247e-22
Identity = 50/64 (78.12%), Postives = 53/64 (82.81%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            GDWS IIK IGMFTFTGL+ EQV  M KEYHIYMT DGRISMA LSSK+VP L DAIHA VTR+
Sbjct:  339 GDWSHIIKHIGMFTFTGLSEEQVRLMAKEYHIYMTYDGRISMASLSSKTVPQLADAIHAVVTRI 402          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_CHICK (Aspartate aminotransferase, cytoplasmic OS=Gallus gallus GN=GOT1 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 9.483e-14
Identity = 33/64 (51.56%), Postives = 49/64 (76.56%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            G W+ I  QIGMF+FTGLN +QV +M KE HIY+ + GRI+M GL++K++ ++  +IH AVT++
Sbjct:  348 GTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 411          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATC_MOUSE (Aspartate aminotransferase, cytoplasmic OS=Mus musculus GN=Got1 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.759e-13
Identity = 32/64 (50.00%), Postives = 48/64 (75.00%), Query Frame = -3
Query:  141 GDWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAIHAAVTRM 332
            G WS I +QIGMF+FTGLN +QV ++  E HIY+   GRI+M GL++K++ ++  +IH AVT++
Sbjct:  349 GTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 412          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AAT5_ARATH (Aspartate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=ASP5 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.603e-13
Identity = 35/56 (62.50%), Postives = 42/56 (75.00%), Query Frame = -3
Query:  162 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAI 329
            DWS I+KQIGMF+FTGLN  Q   MT ++H+YMT DGRIS+AGLS     +L DAI
Sbjct:  390 DWSFILKQIGMFSFTGLNKAQSDNMTDKWHVYMTKDGRISLAGLSLAKCEYLADAI 445          
BLAST of CN191755 vs. ExPASy Swiss-Prot
Match: AATM_LUPAN (Aspartate aminotransferase P2, mitochondrial (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 4.706e-13
Identity = 34/56 (60.71%), Postives = 42/56 (75.00%), Query Frame = -3
Query:  162 DWSPIIKQIGMFTFTGLNSEQVAFMTKEYHIYMTSDGRISMAGLSSKSVPHLTDAI 329
            DWS I+KQIGMF++TGLN  Q   MT ++H+YMT DGRIS+AGLS     +L DAI
Sbjct:  391 DWSFILKQIGMFSYTGLNKNQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAI 446          
The following BLAST results are available for this feature:
BLAST of CN191755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
AAT2_ARATH2.570e-2787.69Aspartate aminotransferase, cytoplasmic isozyme 1 ... [more]
AATC_DAUCA8.269e-2687.10Aspartate aminotransferase, cytoplasmic OS=Daucus ... [more]
AAT3_ARATH8.269e-2687.30Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATC_ORYSJ1.080e-2582.81Aspartate aminotransferase, cytoplasmic OS=Oryza s... [more]
AAT1_MEDSA9.142e-2582.81Aspartate aminotransferase 1 OS=Medicago sativa GN... [more]
AAT4_ARATH4.247e-2278.13Aspartate aminotransferase, cytoplasmic isozyme 2 ... [more]
AATC_CHICK9.483e-1451.56Aspartate aminotransferase, cytoplasmic OS=Gallus ... [more]
AATC_MOUSE2.759e-1350.00Aspartate aminotransferase, cytoplasmic OS=Mus mus... [more]
AAT5_ARATH3.603e-1362.50Aspartate aminotransferase, chloroplastic OS=Arabi... [more]
AATM_LUPAN4.706e-1360.71Aspartate aminotransferase P2, mitochondrial (Frag... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005M07_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191755 ID=CN191755; Name=CN191755; organism=Citrus sinensis; type=EST; length=334bp
ACCGAAACAACAAAATTTTCTTAATGTAAAACCTTTATTTATGCATTTTC
TAGTTCTACAGACTTATTTTTGCATTGCTGAGGGTGACTGAAAACCAAAC
AATTCTTACGGCATGAATTCTTGTCTGATTAATCATAGCCCATTCGGGTT
ACAGCAGCATGTATAGCATCGGTAAGATGAGGAACTGACTTTGAACTAAG
ACCTGCCATGCTAATCCTCCCATCAGATGTCATATAAATGTGATACTCCT
TGGTCATGAAGGCAACTTGCTCACTGTTCAGCCCTGTGAATGTAAACATT
CCTATTTGCTTGATAATGGGACTCCAGTCTCCTG
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