CN191739

Overview
NameCN191739
Unique NameCN191739
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12023 contig Csv1_Contig12023:34..767. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 2.957e-94
Identity = 159/209 (76.08%), Postives = 172/209 (82.30%), Query Frame = 1
Query:  106 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            G GW +AHATFY              YGNLYS+GYGTNTAALSTALFNNG+SCGACFEI+C ND +WC PGSI VTATNFC          GGWCNPPQQHFDLSQPVF++IAQY+AGIVPV+YRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV +  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSFKVTTSDG T+VSNN
Sbjct:   24 GGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNN 232          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 336.65 bits (862), Expect = 8.052e-92
Identity = 156/210 (74.29%), Postives = 172/210 (81.90%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            YG GW +AHATFY              YGNLYS+GYGT+TAALSTALFNNG+SCG+CFEI+C ND +WC PGSI VTATNFC          GGWCNPP +HFDL+QPVF++IAQY+AGIVPVSYRRVPC R+GGIRFTINGHSYFNLVLITNVGGAGDV + +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSFKVTTSDG TVVS N
Sbjct:   22 YGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFN 231          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 334.724 bits (857), Expect = 3.060e-91
Identity = 154/210 (73.33%), Postives = 169/210 (80.48%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            Y  GW +AHATFY              YGNLYS+GYGTNTAALSTALFNNG+SCGACFEIKC +D  WC PG+I VTATNFC          GGWCNPP  HFDLSQPVF++IAQYKAG+VPVSYRRVPC R+GGIRFTINGHSYFNLVL+TNVGGAGDV +V++KGSRT WQ MSRNWGQNWQSN+ LNGQ+LSFKVT SDG TVVSNN
Sbjct:   26 YDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNN 235          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 319.316 bits (817), Expect = 1.330e-86
Identity = 148/210 (70.48%), Postives = 164/210 (78.10%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            Y  GW +A ATFY              YGNLYS+GYGTNTAALSTALFN G SCGACF+IKCV+DP+WC  G+I VT TNFC          GGWCNPPQ HFDL+QP+F +IAQYKAG+VPV YRRV C RKGGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ T WQ MSRNWGQNWQSN+ L+GQ+LSFKVTTSDG TV+SNN
Sbjct:   25 YSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNN 234          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 315.079 bits (806), Expect = 2.509e-85
Identity = 147/208 (70.67%), Postives = 165/208 (79.33%), Query Frame = 1
Query:  112 GWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRT-DWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            GW   HATFY              YGNLY +GYGTNTAALSTALFNNG++CGAC+E+KC +DPRWC   +I VTATNFC          GGWCNPP QHFDL++P F QIAQY+AGIVPVS+RRVPC +KGGIRFTINGHSYFNLVLI+NVGGAGDV AVSIKGS+T  WQ MSRNWGQNWQSNSY+N QSLSF+VTTSDG T+VSN+
Sbjct:   29 GWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSND 236          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.071e-84
Identity = 143/210 (68.10%), Postives = 165/210 (78.57%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            YG GW  AHATFY              YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N    C PGSI VTATNFC          GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNN
Sbjct:   21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNN 229          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 8.071e-84
Identity = 143/210 (68.10%), Postives = 165/210 (78.57%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            YG GW  AHATFY              YGNLYS+GYGTNTAALSTALFN+G +CG+C+E++C N    C PGSI VTATNFC          GGWCNPP+ HFD+++P F  IAQY+AGIVPVS+RRVPC +KGG+RFT+NGHSYFNLVL+TNV GAGDVR+VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF+VT SDG TV SNN
Sbjct:   21 YG-GWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNN 229          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2)

HSP 1 Score: 306.605 bits (784), Expect = 8.924e-83
Identity = 141/210 (67.14%), Postives = 160/210 (76.19%), Query Frame = 1
Query:  103 YGQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGSIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            YG  W  AHATFY              YGNLYS GYGTNTAALST LFN+G +CG+C+E++C ND +WC PGS+ VTATN C          GGWCNPP+ HFD+++P F QI  Y+AGIVPVSYRRVPC +KGGIRFTINGHSYFNLVL+TNV G GDV++VSIKGS T WQPMSRNWGQNWQSNSYL+GQSLSF+V  SDG TV SNN
Sbjct:   26 YGS-WQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIGVYRAGIVPVSYRRVPCVKKGGIRFTINGHSYFNLVLVTNVAGPGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVSDGRTVTSNN 234          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.198e-81
Identity = 141/211 (66.82%), Postives = 159/211 (75.36%), Query Frame = 1
Query:  106 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPGS--IFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            G  W +AHATFY              YGNLYS+GYGTNTAALSTALFNNGMSCGACFE+KC NDP+WC  GS  I +TATNFC          GGWCNPP++HFDL+ PVF +IAQY+AGIVPVSYRRVPC ++GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQSN+ L GQ+LSF+VT SD  T  S N
Sbjct:   28 GGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWN 238          
BLAST of CN191739 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 3.749e-81
Identity = 139/211 (65.88%), Postives = 159/211 (75.36%), Query Frame = 1
Query:  106 GQGWTDAHATFYXXXXXXXXXXXXXXYGNLYSEGYGTNTAALSTALFNNGMSCGACFEIKCVNDPRWCRPG--SIFVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFEQIAQYKAGIVPVSYRRVPCSRKGGIRFTINGHSYFNLVLITNVGGAGDVRAVSIKGSRTDWQPMSRNWGQNWQSNSYLNGQSLSFKVTTSDGHTVVSNN 732
            G  W +AHATFY              YGNLYS+GYG NTAALSTALFNNG+SCG+CFE+KC+NDP WC PG  SI +TATNFC          GGWCNPP++HFDL+ P+F  IA+YKAGIVPVSYRR+PC +KGGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T W  +SRNWGQNWQSN+ L GQSLSF+V TSDG +  SNN
Sbjct:   29 GGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNN 239          
The following BLAST results are available for this feature:
BLAST of CN191739 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
EXPA1_ARATH2.957e-9476.08Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH8.052e-9274.29Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP15_ARATH3.060e-9173.33Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXP14_ARATH1.330e-8670.48Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA8_ARATH2.509e-8570.67Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA4_ORYSJ8.071e-8468.10Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI8.071e-8468.10Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA2_ORYSJ8.924e-8367.14Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ARATH2.198e-8166.82Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]
EXPA9_ARATH3.749e-8165.88Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005L20_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191739 ID=CN191739; Name=CN191739; organism=Citrus sinensis; type=EST; length=734bp
GAGGTTCTCTCTTACAAAAAGATACGCAAGCAAAAGGGTTTCAGGAACAT
GGCATTTCTTGGGCTGCTGTTGTTGGGGATTCTTTCTTTAGTCTCATCTG
TTTATGGCCAGGGATGGACTGATGCTCATGCCACTTTTTATGGTGGGGGT
GATGCCTCTGGTACAATGGGTGGCGCTTGTGGGTATGGAAACTTATACAG
CGAGGGATATGGGACAAACACAGCAGCTCTGAGCACTGCACTTTTCAACA
ATGGCATGAGCTGTGGGGCTTGTTTTGAGATCAAGTGTGTTAATGACCCA
AGATGGTGCCGTCCGGGCTCCATTTTTGTTACTGCCACAAATTTTTGCCC
TCCAAATAATGCTCTCCCAAACAATGCCGGTGGCTGGTGCAATCCTCCCC
AGCAACATTTTGACCTCTCTCAGCCTGTGTTTGAACAAATTGCTCAGTAC
AAAGCTGGGATAGTACCTGTGTCTTACAGAAGGGTTCCATGCAGTAGGAA
GGGAGGCATCAGATTCACGATCAACGGCCATTCTTACTTCAACTTAGTCC
TAATCACAAACGTCGGAGGCGCTGGTGATGTGCGTGCTGTTTCAATCAAA
GGGTCAAGAACTGATTGGCAACCCATGTCAAGGAACTGGGGTCAAAACTG
GCAAAGTAACAGTTACCTCAATGGCCAAAGCCTCTCATTTAAGGTCACCA
CAAGTGATGGCCACACTGTTGTCTCTAACAATGT
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