CN191732

Overview
NameCN191732
Unique NameCN191732
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: DHQSD_ARATH (Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1)

HSP 1 Score: 316.235 bits (809), Expect = 1.521e-85
Identity = 164/241 (68.05%), Postives = 189/241 (78.42%), Query Frame = -2
Query:  163 IAKFFQTYSSNDFAGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIEDGLRGRLNVSG--GVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIMAKY 879
            +  F Q YSS+DFAGFSCTIPHKEAA++CCDEVD +AKSIGAVN I+RR+SDGKL GYNTD +G+ISAIEDGLR   + S     SS LA K  VVI                 A+VVIANRTY+RA ELAE +GG ALSL DL+N++PEDGM+LANTTS+GMQP V+ETPI K AL HYALVFDAVYTP+ITRLLREAEESGA  VSG EMF+ QAYEQ+E FTGLPAPKEL+ +IM+KY
Sbjct:  363 LVSFLQAYSSSDFAGFSCTIPHKEAALQCCDEVDPLAKSIGAVNTILRRKSDGKLLGYNTDCIGSISAIEDGLRSSGDPSSVPSSSSPLASKTVVVIGAGGAGKALAYGAKEKGAKVVIANRTYERALELAEAIGGKALSLTDLDNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGAITVSGSEMFVRQAYEQFEIFTGLPAPKELYWQIMSKY 603          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BREBN (Shikimate dehydrogenase OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27
Identity = 86/233 (36.91%), Postives = 120/233 (51.50%), Query Frame = -2
Query:  172 GFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAI--EDGLRGRLNV-----SGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRARELAETVGGHALSLADLENFNPE----DGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTGLPAPKELFQKIM 837
            G + TIPHK A +   DE+D +AK IGAVN ++ R  DG+L GYNTD +G + ++  E G+     V     +GG + A+A  L                       + I NR+ +RA  LAE VG   +    +E    E    D  +L NTTSIGM P V ETP+P   L     V D +Y P  TRLL+EA   GAT+ SG+ MF+ Q    +E +TG  AP  + ++++
Sbjct:   62 GINVTIPHKVAIMPMLDEIDPLAKRIGAVNTVVSR--DGRLIGYNTDGMGYVRSLVEETGIVLEKQVVTMVGAGGAARAVAFTL----------------AEQGVKEIRIINRSRERAAVLAEHVG-MIVPTKIVEQGEGEAAIADSSLLINTTSIGMLPNVQETPVPAEWLHSGLTVSDLIYNPLETRLLKEARAIGATVHSGIGMFVNQGALAFELWTGEQAPTGVMREVV 275          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACCZ (Shikimate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 9.376e-27
Identity = 85/237 (35.86%), Postives = 129/237 (54.43%), Query Frame = -2
Query:  166 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L  V                    + +ANRT D+A+EL  A T   H+++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISNEPLQEKRILLLGAGGASRAIYFSLADV----------------GVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACHK (Shikimate dehydrogenase OS=Bacillus thuringiensis subsp. konkukian GN=aroE PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.225e-26
Identity = 84/237 (35.44%), Postives = 128/237 (54.01%), Query Frame = -2
Query:  166 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L                       + +ANRT D+A+EL  A T   H+++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSEPLQEKRILLLGAGGASRAIYFSL----------------ADAGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKEQGSYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACCR (Shikimate dehydrogenase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26
Identity = 81/222 (36.49%), Postives = 122/222 (54.95%), Query Frame = -2
Query:  208 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 840
            +GF+ T PHK A ++  DE+D +A+ IGAVN ++ +  DG+L GYNTD +G + A++        G R  L  SGG S A+   L  V                    + +ANRT D+A+EL  A T   ++++L+ LE    E G   I+  TT+IGM P V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct:   57 SGFNVTTPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNEPLQGKRILLLGSGGASRAIYFSLADV----------------GVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACC4 (Shikimate dehydrogenase OS=Bacillus cereus (strain B4264) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26
Identity = 81/222 (36.49%), Postives = 122/222 (54.95%), Query Frame = -2
Query:  208 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 840
            +GF+ T PHK A ++  DE+D +A+ IGAVN ++ +  DG+L GYNTD +G + A++        G R  L  SGG S A+   L  V                    + +ANRT D+A+EL  A T   ++++L+ LE    E G   I+  TT+IGM P V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct:   57 SGFNVTTPHKVAIMEYLDEIDPLARKIGAVNTVVHK--DGRLIGYNTDGIGFVRALQSISNEPLQGKRILLLGSGGASRAIYFSLADV----------------GVKEIDVANRTVDKAKELIAARTADVNSVALS-LEKATEEQGNYDIIIQTTTIGMHPHVEHTPLQICSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTG 259          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACC0 (Shikimate dehydrogenase OS=Bacillus cereus (strain AH820) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26
Identity = 84/237 (35.44%), Postives = 128/237 (54.01%), Query Frame = -2
Query:  166 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L                       + +ANRT D+A+EL  A T   H+++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSEPLQEKRILLLGAGGASRAIYFSL----------------ADAGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACAC (Shikimate dehydrogenase OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=aroE PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.599e-26
Identity = 84/237 (35.44%), Postives = 128/237 (54.01%), Query Frame = -2
Query:  166 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL--AETVGGHALSLADLENFNPEDGM--ILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG-LPAPKELFQKIMAK 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L                       + +ANRT D+A+EL  A T   H+++L+ LE    E G   I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG +P  + + Q ++ K
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVRALQSISSEPLQEKRILLLGAGGASRAIYFSL----------------ADAGVKEIDVANRTVDKAKELIAACTATVHSVALS-LEKATKEQGNYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAIIQNGIDMFVYQGALAFEMWTGCVPNIERMKQLVIRK 274          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACCQ (Shikimate dehydrogenase OS=Bacillus cereus (strain Q1) GN=aroE PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 81/222 (36.49%), Postives = 118/222 (53.15%), Query Frame = -2
Query:  208 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL----AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L  V                    + +ANRT D+A+EL      TV   ALSL +      E+  I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSEPLQEKRILLLGAGGASRAIYFSLADV----------------GVKEIDVANRTVDKAKELITACTATVHSVALSLEEATE-EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259          
BLAST of CN191732 vs. ExPASy Swiss-Prot
Match: AROE_BACC7 (Shikimate dehydrogenase OS=Bacillus cereus (strain AH187) GN=aroE PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.728e-26
Identity = 81/222 (36.49%), Postives = 118/222 (53.15%), Query Frame = -2
Query:  208 AGFSCTIPHKEAAVKCCDEVDTVAKSIGAVNCIIRRQSDGKLFGYNTDYVGAISAIED-------GLRGRLNVSGGVSSALAGKLFVVIXXXXXXXXXXXXXXXXXARVVIANRTYDRAREL----AETVGGHALSLADLENFNPEDGMILANTTSIGMQPKVDETPIPKHALGHYALVFDAVYTPKITRLLREAEESGATIVSGLEMFIGQAYEQYERFTG 840
            +GF+ T PHK A +   DE+D +AK IGAVN ++ +  DGKL GYNTD +G + A++          R  L  +GG S A+   L  V                    + +ANRT D+A+EL      TV   ALSL +      E+  I+  TT+IGM P+V+ TP+   +L    +V D +Y P  T++L EA+E GA I +G++MF+ Q    +E +TG
Sbjct:   57 SGFNVTTPHKVAIMDYLDEIDPLAKQIGAVNTVVHK--DGKLIGYNTDGIGFVKALQSISSEPLQEKRILLLGAGGASRAIYFSLADV----------------GVKEIDVANRTVDKAKELITACTATVHSVALSLEEATE-EQENYDIIIQTTTIGMHPRVEHTPLQISSLKKGTIVSDIIYNPFETKILCEAKEQGAMIQNGIDMFVYQGALAFEMWTG 259          
The following BLAST results are available for this feature:
BLAST of CN191732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
DHQSD_ARATH1.521e-8568.05Bifunctional 3-dehydroquinate dehydratase/shikimat... [more]
AROE_BREBN9.376e-2736.91Shikimate dehydrogenase OS=Brevibacillus brevis (s... [more]
AROE_BACCZ9.376e-2735.86Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]
AROE_BACHK1.225e-2635.44Shikimate dehydrogenase OS=Bacillus thuringiensis ... [more]
AROE_BACCR1.599e-2636.49Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]
AROE_BACC41.599e-2636.49Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]
AROE_BACC01.599e-2635.44Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]
AROE_BACAC1.599e-2635.44Shikimate dehydrogenase OS=Bacillus anthracis (str... [more]
AROE_BACCQ2.728e-2636.49Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]
AROE_BACC72.728e-2636.49Shikimate dehydrogenase OS=Bacillus cereus (strain... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0005L14_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191732 ID=CN191732; Name=CN191732; organism=Citrus sinensis; type=EST; length=880bp
CTAAGAAATTTAGGATTTTATTTCCATACATAAANATTGAGGTACAAGTA
GACCTTTTATATTTTTGTCAGAAGAAAAAAATGAACAACGATGCTTCATG
TTGAATTACGCTAGAAAACAAAATCAGCAACATGTAATGGATTGACCAAA
CAGACCACACTAGTACTTTGCCATGATTTTCTGAAATAGTTCCTTCGGCG
CAGGCAATCCAGTGAATCTTTCATACTGTTCATATGCCTGTCCAATGAAC
ATCTCCAGCCCTGACACAATTGTGGCTCCAGATTCCTCTGCTTCTCTCAA
GAGTCTGGTAATTTTCGGGGTGTAAACAGCATCAAAGACCAGCGCATAAT
GTCCCAAAGCATGCTTCGGAATAGGTGTTTCATCAACTTTTGGCTGCATT
CCAATGGACGTTGTGTTTGCAAGAATCATGCCATCCTCCGGATTAAAATT
TTCCAGGTCGGCAAGAGATAAAGCATGTCCTCCTACAGTCTCTGCAAGTT
CTCTGGCTCGATCATAAGTGCGATTGGCAATCACAACCCTTGCTCCCTTT
GCTTTTGCACCATAAGCAAGTGCCTTGCCAGCACCACCAGCTCCAATGAC
CACAAATAACTTACCTGCTAATGCTGAGCTGACCCCACCACTGACATTAA
GTCTACCTCTTAGTCCATCCTCAATAGCAGAAATAGCACCAACATAGTCT
GTATTGTAACCAAATAACTTCCCATCACTTTGTCTTCTTATGATACAATT
AACAGCTCCTATTGACTTGGCAACTGTATCAACCTCATCACAACACTTCA
CTGCTGCCTCTTTGTGAGGAATTGTGCAACTGAATCCGGCAAAATCGTTG
GACGAATAAGTCTGGAAAAATTTTGCAATG
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