CN191729

Overview
NameCN191729
Unique NameCN191729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN191729 vs. ExPASy Swiss-Prot
Match: DEGP1_ARATH (Protease Do-like 1, chloroplastic OS=Arabidopsis thaliana GN=DEGP1 PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 4.858e-19
Identity = 46/81 (56.79%), Postives = 59/81 (72.84%), Query Frame = 3 
Query:  408 MGISGGVIFIAVEEGPAGKAGLRSTKFGANGKFILGDIIKAVNGEDVSNANDLHNILDQCKVGDEVIVRILRGTQLEEILI 650
            +G+SG ++  A   GPAGKAGL+STK    G+ +LGDII +VNG  VSN +DL+ ILDQCKVGDEV V +LRG   E+I +
Sbjct:  350 LGVSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISV 430
The following BLAST results are available for this feature:
BLAST of CN191729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DEGP1_ARATH4.858e-1956.79Protease Do-like 1, chloroplastic OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0005L12_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005L12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN191729 ID=CN191729; Name=CN191729; organism=Citrus sinensis; type=EST; length=696bp
TTATTATTTGAAAGACGAAATCACAAGGTATTTACATCTAAATCTCATCT
CATCTGAAGATTTATAGAGCGAATATTAAATAAAACATTAAACAACGACG
ATCATAAAGCATTAAATCACCGGAATCAAAGTGAAAATCAAACGGCGACG
GTCTCTTTCTGATCTTCAGGATCTTCATAGTTAGGATCATTAGCATCGAT
GGCTTCGTCCAAGCCGATCTCAGCCTGCGAGTAACCGTCGCCTGACCACG
TGAACTTGCCTCCGTGGCCTTTCTTTTTGGGCGATCCGTTCATGCCAGTT
GCGGATTTCTTGTCACTCCGCTGATCTGTTGTTGATTTGTTTCTTGCACC
GTGGCCGTGGCTCTTCGCAGGCTTCTTCATTCTTGGAACCTTGATGATTG
GAAACTTATGGGTATAAGTGGAGGAGTGATCTTCATTGCAGTTGAAGAGG
GTCCTGCGGGCAAAGCAGGTCTGAGATCAACCAAATTTGGAGCTAATGGC
AAATTCATTTTGGGCGACATCATAAAGGCTGTGAATGGAGAGGATGTCTC
CAATGCCAACGATTTGCACAACATTCTTGATCAATGTAAAGTTGGAGATG
AGGTGATTGTAAGGATCTTGCGTGGTACTCAATTGGAAGAAATTCTCATT
TATTCTTGAAGTCGAACCTGATGAGGCAGAGCGAAAGAAAATGTTT
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