GR312984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_PEA (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum GN=RPL1 PE=2 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.673e-50 Identity = 97/107 (90.65%), Postives = 101/107 (94.39%), Query Frame = 1 Query: 1 TKFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 TKF E EAHFRLNIDPKYNDQQLRATVSLPKGTGK ++VAVL QGE+FDEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPDMM KVASLGKILGPRGLMPNPKA Sbjct: 88 TKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPKA 194
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.199e-48 Identity = 95/107 (88.79%), Postives = 100/107 (93.46%), Query Frame = 1 Query: 1 TKFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 T+F E EAHFRLNIDPKYNDQQLRATVSLPKGTG++V VAVLAQGEK DEAK+AGAD+VG DDLIEQIKGGFMEFDKLIASPDMMVKVA LGKILGPRGLMPNPKA Sbjct: 144 TRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMVKVAGLGKILGPRGLMPNPKA 250
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 6.577e-47 Identity = 90/107 (84.11%), Postives = 100/107 (93.46%), Query Frame = 1 Query: 1 TKFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 TKF E AEAHFRLNIDPKYNDQQLRATVSLPKGTGK+V++AVLAQG+K DEAK AGAD+VGG++LIEQIKGGFM+FDKLIA+ DMM KVASLG+ILGPRGLMP PKA Sbjct: 150 TKFVETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMAKVASLGRILGPRGLMPTPKA 256
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_CYAP8 (50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801) GN=rplA PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 4.725e-37 Identity = 74/105 (70.48%), Postives = 87/105 (82.86%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY DQQLR TVSLPKGTG+ V VAV+A+GEK EA NAGAD+VG ++LIE+I G M+F+ LIA+PDMM KVA LG++LGPRGLMP+PK Sbjct: 38 KFNESAEAHIRLGIDPKYTDQQLRTTVSLPKGTGQEVRVAVIARGEKVQEANNAGADIVGSEELIEEIFKGMMDFEVLIATPDMMPKVAKLGRLLGPRGLMPSPK 142
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_SYNY3 (50S ribosomal protein L1 OS=Synechocystis sp. (strain PCC 6803) GN=rplA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36 Identity = 73/105 (69.52%), Postives = 88/105 (83.81%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY+DQQ+R TVSLPKGTG++V VAVLA+GEK EA +AGAD+ G ++LIE+I+ G M+FD LIA+PDMM K+A LGK LGPRGLMP+PK Sbjct: 38 KFDETAEAHIRLGIDPKYSDQQIRTTVSLPKGTGQTVRVAVLARGEKVKEATDAGADIAGSEELIEEIQKGMMDFDVLIATPDMMPKIARLGKQLGPRGLMPSPK 142
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_PROMM (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9313) GN=rplA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36 Identity = 73/106 (68.87%), Postives = 86/106 (81.13%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E EAH RL IDPKY DQQLR TV+LP+GTG+SV +AV+++GEK EAK AGA+L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKA Sbjct: 36 KFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVISRGEKLAEAKTAGAELAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36 Identity = 73/105 (69.52%), Postives = 86/105 (81.90%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY DQQLR TVSLPKGTG++V VAV+ +GEK EA NAGAD+VG ++LIE+I G M+F+ LIA+PDMM KVA LG+ LGPRGLMP+PK Sbjct: 37 KFDETAEAHIRLGIDPKYTDQQLRTTVSLPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKVAKLGRQLGPRGLMPSPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_ANASP (50S ribosomal protein L1 OS=Anabaena sp. (strain PCC 7120) GN=rplA PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 1.795e-36 Identity = 73/105 (69.52%), Postives = 89/105 (84.76%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY DQQLR TV+LPKGTG+ V VAV+A+GEK EA NAGAD+VG ++LI++I+ G M+FDKLIA+PD+M +VA LGK+LGPRGLMP+PK Sbjct: 37 KFGEAAEAHIRLGIDPKYTDQQLRTTVALPKGTGQIVRVAVIARGEKVTEASNAGADVVGSEELIDEIQKGRMDFDKLIATPDVMPQVAKLGKMLGPRGLMPSPK 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_PROM3 (50S ribosomal protein L1 OS=Prochlorococcus marinus (strain MIT 9303) GN=rplA PE=3 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 2.345e-36 Identity = 73/106 (68.87%), Postives = 85/106 (80.19%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPKA 321 KF E EAH RL IDPKY DQQLR TV+LP+GTG+SV +AV+ +GEK EAK AGA+L G DDL+E I G M+FD LIA+PDMM KVA LG++LGPRGLMPNPKA Sbjct: 36 KFDETIEAHVRLGIDPKYTDQQLRTTVALPQGTGQSVRIAVITRGEKLAEAKTAGAELAGDDDLVESIGKGQMDFDLLIATPDMMPKVAKLGRVLGPRGLMPNPKA 141
BLAST of GR312984 vs. ExPASy Swiss-Prot
Match: RL1_TRIEI (50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain IMS101) GN=rplA PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 3.062e-36 Identity = 71/105 (67.62%), Postives = 88/105 (83.81%), Query Frame = 1 Query: 4 KFTEIAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVEVAVLAQGEKFDEAKNAGADLVGGDDLIEQIKGGFMEFDKLIASPDMMVKVASLGKILGPRGLMPNPK 318 KF E AEAH RL IDPKY DQQLR TV+LPKGTG+++ +AV+A+GEK +EA AGADL G ++LIEQI G MEFD+LIA+PD+M +VA LG++LGPRGLMP+PK Sbjct: 37 KFLEAAEAHVRLGIDPKYTDQQLRTTVALPKGTGQTIRIAVIAKGEKVNEALAAGADLAGSEELIEQISKGMMEFDRLIATPDVMPQVAKLGRLLGPRGLMPSPK 141 The following BLAST results are available for this feature:
BLAST of GR312984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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