GR312974

Overview
NameGR312974
Unique NameGR312974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1574 contig Csv1_Contig1574:895..1109. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.262e-18
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI  TTEFWTSH CLLLPY+QSLTRLDSTSG YY CSAHF+WVGE
Sbjct:  307 HPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHFIWVGE 352          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.671e-18
Identity = 39/46 (84.78%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI  TTEFWTSH CLLLPY+QSLTR DSTSG YY CSAHFLWVGE
Sbjct:  306 HPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGE 351          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 1.068e-17
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI TTTEFWTSH CLLLPY+Q+LTR DSTSG YY CSAH LWVGE
Sbjct:  269 HPIMTTTEFWTSHECLLLPYEQALTREDSTSGLYYDCSAHMLWVGE 314          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.395e-17
Identity = 38/46 (82.61%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI  TTEFWTSH CLLLPY+QSLTR DSTSG +Y CSAHFLWVGE
Sbjct:  306 HPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLHYDCSAHFLWVGE 351          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.108e-17
Identity = 37/46 (80.43%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI TTT+FWTSH CLLLPY+QSLTR DSTSG +Y CSAH LWVGE
Sbjct:  297 HPIMTTTDFWTSHECLLLPYEQSLTREDSTSGLFYDCSAHMLWVGE 342          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.181e-16
Identity = 36/46 (78.26%), Postives = 39/46 (84.78%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI  TTEFWTSH CLLLPY+Q+LTR DSTSG +Y CSAH LWVGE
Sbjct:  270 HPIMATTEFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMLWVGE 315          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.631e-16
Identity = 35/46 (76.09%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HP+ TTT+F+TSH CLLLPY+QSLTRLDSTSG YY CSAH +W GE
Sbjct:  292 HPLMTTTDFYTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMVWCGE 337          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 3.436e-16
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HP+ T+T+FWTSH CLLLPY+QSLTR DST+G +Y CSAH LWVGE
Sbjct:  312 HPLMTSTDFWTSHECLLLPYEQSLTRQDSTTGHFYDCSAHMLWVGE 357          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.488e-16
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI +TT+FWTSH CLLLPY+Q+LTR DSTSG +Y CSAH +WVGE
Sbjct:  279 HPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324          
BLAST of GR312974 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 4.488e-16
Identity = 34/46 (73.91%), Postives = 40/46 (86.96%), Query Frame = 1
Query:   76 HPITTTTEFWTSHXCLLLPYDQSLTRLDSTSGFYYXCSAHFLWVGE 213
            HPI +TT+FWTSH CLLLPY+Q+LTR DSTSG +Y CSAH +WVGE
Sbjct:  279 HPIMSTTDFWTSHECLLLPYEQALTREDSTSGLFYDCSAHMVWVGE 324          
The following BLAST results are available for this feature:
BLAST of GR312974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
AROF_TOBAC1.262e-1884.78Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU3.671e-1884.78Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH1.068e-1782.61Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_SOLLC1.395e-1782.61Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ3.108e-1780.43Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_CATRO1.181e-1678.26Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROF_ARATH2.631e-1676.09Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_ORYSJ3.436e-1673.91Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU4.488e-1673.91Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC4.488e-1673.91Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
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Properties
Property NameValue
Genbank descriptionC06054F09 RindPdigS Citrus sinensis cDNA clone N17F08, mRNA sequence.