GR312970

Overview
NameGR312970
Unique NameGR312970
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig67 contig Csv1_Contig67:166..486. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GR312970 vs. ExPASy Swiss-Prot
Match: RR31_ARATH (30S ribosomal protein S31, chloroplastic OS=Arabidopsis thaliana GN=RPS31 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.172e-16
Identity = 40/64 (62.50%), Postives = 46/64 (71.88%), Query Frame = 3 
Query:    3 CGRGDKKTAKGKRFNHSFGNARPRDKKKXXXXXXXXXXXXXXXKDRFDDGEKIHIDLDESLFSN 194
            CGRGD+KTAKGKRFNHSFGNARPR+K K               KD+F++ EKI ID+DESLFSN
Sbjct:   55 CGRGDRKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118
The following BLAST results are available for this feature:
BLAST of GR312970 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
RR31_ARATH1.172e-1662.5030S ribosomal protein S31, chloroplastic OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionC06054F05 RindPdigS Citrus sinensis cDNA clone N16D09, mRNA sequence.