GR312966

Overview
NameGR312966
Unique NameGR312966
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2330 contig Csv1_Contig2330:690..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.977e-44
Identity = 87/132 (65.91%), Postives = 100/132 (75.76%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TSP KE+EAI KLGAD+FLVS DP K+KAAMGTMDYIIDT+SA HSL P                P KPLE+ +F LV  R+L+GGSNIGGMKETQEMLDFC KHNI ADIEL++M +INTA+ERL K+D K
Sbjct:  214 TSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVK 345          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: MTDH1_STYHU (Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.131e-43
Identity = 86/132 (65.15%), Postives = 102/132 (77.27%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            +SP KESEAI  LGAD+FL+SSDP K+KAA GTMDYIIDT+SAVHSL                  P KPL++PIF LV  R+L+GGSN GG+KETQEMLDFC KHNIAA+IEL++MD+INTAIERL+K+D K
Sbjct:  207 SSPNKESEAIDVLGADSFLLSSDPEKMKAATGTMDYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKETQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVK 338          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 1.251e-42
Identity = 84/132 (63.64%), Postives = 104/132 (78.79%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            +S  K  EAI+ LGAD+FLV++DP K+KAA+GTMDYIIDT+SAVH+L P                PEKPLE+P+F LV  R++VGGS++GGMKETQEMLDFCAKHNI ADIEL++MD+INTA+ERLAKSD +
Sbjct:  215 SSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVR 346          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: CADH2_ARATH (Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis thaliana GN=CAD2 PE=1 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 4.163e-38
Identity = 77/131 (58.78%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    4 SPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            S +KE EAI +LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P                PEKPL++PIF+LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RLAKSD +
Sbjct:  212 SSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVR 342          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 2.284e-36
Identity = 75/132 (56.82%), Postives = 95/132 (71.97%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TSPKKE EA+  LGAD+FLVS D  +++AA+GTMD IIDTVSA H L P                PEKPLE+P+F L+  R++V GS IGGMKETQEM+DF A+HNI ADIE++ +D +NTA+ERL K+D +
Sbjct:  213 TSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVR 344          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: CADH3_ARATH (Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.984e-36
Identity = 75/131 (57.25%), Postives = 96/131 (73.28%), Query Frame = 1
Query:    4 SPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            S +KE EAI +LGAD+FLV++D  K+K A+GTMD+IIDTVSA H+L P                 EKPL++PIF LV  R++VGGS IGGMKETQEML+FCAKH I +DIEL++M  IN+A++RL KSD +
Sbjct:  211 SSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVR 341          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.089e-36
Identity = 76/132 (57.58%), Postives = 92/132 (69.70%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TS KK  EAI++LGADAFLVS DP ++K AMGTMD IIDTVSA HSL P                PEKPLE+P+  L+  R++V GS IGG+KETQEM+D   KHNI ADIEL+  D +NTA+ERL K+D +
Sbjct:  211 TSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVR 342          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 4.308e-35
Identity = 73/132 (55.30%), Postives = 92/132 (69.70%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TS +K  EA+++LGADAFLVS DP ++K AMGTMD IIDTVSA H L P                P +PLE+P+F L+  R++V GS +GG+KETQEM+D   KHNI ADIEL+  D +NTA+ERLAK+D K
Sbjct:  211 TSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVK 342          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.627e-35
Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TSP K+ EA+++LGAD+F+VS +P ++++AMGT+D IIDTVSA H L P                P+KPLE+P+F L+  R+++ GS IGGMKETQEM+DF AKH+I +DIE+V MD +NTA+ERL K D +
Sbjct:  216 TSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVR 347          
BLAST of GR312966 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.637e-34
Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 1
Query:    1 TSPKKESEAISKLGADAFLVSSDPAKVKAAMGTMDYIIDTVSAVHSLAPXXXXXXXXXXXXXXXXPEKPLEVPIFALVGARRLVGGSNIGGMKETQEMLDFCAKHNIAADIELVRMDQINTAIERLAKSDAK 396
            TS  K+ EA+ KLGAD FLVSSD  +++AA GT+  IIDTVSA+H + P                PEKPLE+P+F L+  R+++ GSNIGG+KETQEMLDF A+HNI AD+E++ +D +NTA+ERL KSD +
Sbjct:  192 TSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVR 323          
The following BLAST results are available for this feature:
BLAST of GR312966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
MTDH_MEDSA2.977e-4465.91Probable mannitol dehydrogenase OS=Medicago sativa... [more]
MTDH1_STYHU1.131e-4365.15Probable mannitol dehydrogenase 1 OS=Stylosanthes ... [more]
CADH9_ARATH1.251e-4263.64Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
CADH2_ARATH4.163e-3858.78Cinnamyl alcohol dehydrogenase 2 OS=Arabidopsis th... [more]
MTDH_FRAAN2.284e-3656.82Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
CADH3_ARATH2.984e-3657.25Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis th... [more]
CADH8_ARATH5.089e-3657.58Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
CADH7_ARATH4.308e-3555.30Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
MTDH_MESCR5.627e-3553.03Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_PETCR1.637e-3453.79Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]

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Properties
Property NameValue
Genbank descriptionC06054E11 RindPdigS Citrus sinensis cDNA clone N12F12, mRNA sequence.