GR312962

Overview
NameGR312962
Unique NameGR312962
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13853 contig Csv1_Contig13853:1..682. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GR312962 vs. ExPASy Swiss-Prot
Match: FER3_ARATH (Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.120e-12
Identity = 39/81 (48.15%), Postives = 56/81 (69.14%), Query Frame = 2 
Query:  455 MSTVTLSAPCMVRAAPRNQLSRNLIKSPS---SLGSVKGISKTFGLKCSPNFQASM--AVYKIKLIGPNGEEHEFEAQEDQ 682
            M+TV +S+  M +A  R+Q +  LI + S   S+GS K +S++FGLKCS N   +   AVYK+KL+GP+G+E EFE Q+DQ
Sbjct:    1 MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAVYKVKLLGPDGQEDEFEVQDDQ 81
The following BLAST results are available for this feature:
BLAST of GR312962 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FER3_ARATH1.120e-1248.15Ferredoxin-3, chloroplastic OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionC06054E04 RindPdigS Citrus sinensis cDNA clone N08H01, mRNA sequence.