GR312957

Overview
NameGR312957
Unique NameGR312957
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
RindPdigScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_POPTR (NADP-dependent malic enzyme OS=Populus trichocarpa PE=2 SV=3)

HSP 1 Score: 150.214 bits (378), Expect = 7.327e-36
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNEQLLKDEFYIGLRQRRATGQEY+ELL EFM+AVKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHLVFNDDIQG
Sbjct:  234 TNNEQLLKDEFYIGLRQRRATGQEYSELLHEFMTAVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLVFNDDIQG 309          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOC_FLAPR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria pringlei GN=MODA PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 7.582e-33
Identity = 66/76 (86.84%), Postives = 73/76 (96.05%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE++L DEFYIGLRQRRA+G+EYAEL++EFMSAVKQNYGEKVLIQFEDFANHNAF+LL KY TTHLVFNDDIQG
Sbjct:  290 TNNEKMLNDEFYIGLRQRRASGKEYAELMNEFMSAVKQNYGEKVLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQG 365          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_VITVI (NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.881e-32
Identity = 65/76 (85.53%), Postives = 71/76 (93.42%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE+LL +EFYIGL+QRRATG+EY+E L EFMS VKQNYGEKVLIQFEDFANHNAF+LLAKYGTTHL FNDDIQG
Sbjct:  234 TNNEKLLANEFYIGLKQRRATGKEYSEFLQEFMSPVKQNYGEKVLIQFEDFANHNAFDLLAKYGTTHLAFNDDIQG 309          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_PHAVU (NADP-dependent malic enzyme OS=Phaseolus vulgaris GN=ME1 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.881e-32
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE+LL DEFYIGLRQRRATGQEYA  LDEFM AVKQNYGEKVL+QFEDFANHNAF+LL KY ++HLVFNDDIQG
Sbjct:  232 TNNEKLLNDEFYIGLRQRRATGQEYATFLDEFMRAVKQNYGEKVLVQFEDFANHNAFDLLEKYSSSHLVFNDDIQG 307          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOC_ORYSJ (NADP-dependent malic enzyme, chloroplastic OS=Oryza sativa subsp. japonica GN=ME6 PE=2 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 4.915e-32
Identity = 66/76 (86.84%), Postives = 71/76 (93.42%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNEQLL DEFYIGLRQRRATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LLAKY  +HLVFNDDIQG
Sbjct:  282 TNNEQLLNDEFYIGLRQRRATGKEYHELMEEFMSAVKQIYGEKVLIQFEDFANHNAFDLLAKYSKSHLVFNDDIQG 357          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_MESCR (NADP-dependent malic enzyme OS=Mesembryanthemum crystallinum GN=MOD1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.419e-32
Identity = 63/76 (82.89%), Postives = 71/76 (93.42%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNN++LL DEFYIGL+Q+RATG+EYAE + EFMSAVKQNYGEK+L+QFEDFANHNAFELL KY TTHLVFNDDIQG
Sbjct:  228 TNNQKLLDDEFYIGLKQKRATGEEYAEFVQEFMSAVKQNYGEKILVQFEDFANHNAFELLEKYRTTHLVFNDDIQG 303          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOC_SOLLC (NADP-dependent malic enzyme, chloroplastic (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.160e-31
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = -3
Query:    1 QLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 216
            + + DEFYIGLRQRRATGQEY+ELLDEFM AVKQNYGEKVLIQFEDFANHNAF LLAKYGT+HLVFNDDIQG
Sbjct:  221 KFVDDEFYIGLRQRRATGQEYSELLDEFMYAVKQNYGEKVLIQFEDFANHNAFNLLAKYGTSHLVFNDDIQG 292          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOC_FLATR (NADP-dependent malic enzyme, chloroplastic OS=Flaveria trinervia GN=MOD1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30
Identity = 64/77 (83.12%), Postives = 71/77 (92.21%), Query Frame = -3
Query:    1 TNNEQLLKD-EFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE+LL D EFYIGL+Q+RA GQEYAEL++EFMSAVKQNYGE +LIQFEDFANHNAF+LL KY TTHLVFNDDIQG
Sbjct:  290 TNNEKLLNDDEFYIGLKQKRAAGQEYAELMNEFMSAVKQNYGENLLIQFEDFANHNAFDLLEKYRTTHLVFNDDIQG 366          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOC_MAIZE (NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 2.697e-30
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            TNNE LL DEFYIGLRQ+RATG+EY EL++EFMSAVKQ YGEKVLIQFEDFANHNAF+LL KY  +HLVFNDDIQG
Sbjct:  279 TNNEFLLNDEFYIGLRQKRATGEEYDELIEEFMSAVKQFYGEKVLIQFEDFANHNAFDLLEKYSKSHLVFNDDIQG 354          
BLAST of GR312957 vs. ExPASy Swiss-Prot
Match: MAOX_PIG (NADP-dependent malic enzyme (Fragment) OS=Sus scrofa GN=ME1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 2.988e-21
Identity = 50/76 (65.79%), Postives = 53/76 (69.74%), Query Frame = -3
Query:    1 TNNEQLLKDEFYIGLRQRRATGQEYAELLDEFMSAVKQNYGEKVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQG 228
            T NE+LLKD  YIGLRQRR  G EY + LDEFM AV   YG   LIQFEDFAN NAF LL KY   +  FNDDIQG
Sbjct:  183 TENEELLKDPLYIGLRQRRVRGPEYDDFLDEFMEAVSSKYGMNCLIQFEDFANINAFRLLKKYQNQYCTFNDDIQG 258          
The following BLAST results are available for this feature:
BLAST of GR312957 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 151
Match NameE-valueIdentityDescription
MAOX_POPTR7.327e-3694.74NADP-dependent malic enzyme OS=Populus trichocarpa... [more]
MAOC_FLAPR7.582e-3386.84NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOX_VITVI2.881e-3285.53NADP-dependent malic enzyme OS=Vitis vinifera PE=2... [more]
MAOX_PHAVU2.881e-3285.53NADP-dependent malic enzyme OS=Phaseolus vulgaris ... [more]
MAOC_ORYSJ4.915e-3286.84NADP-dependent malic enzyme, chloroplastic OS=Oryz... [more]
MAOX_MESCR6.419e-3282.89NADP-dependent malic enzyme OS=Mesembryanthemum cr... [more]
MAOC_SOLLC4.160e-3188.89NADP-dependent malic enzyme, chloroplastic (Fragme... [more]
MAOC_FLATR2.065e-3083.12NADP-dependent malic enzyme, chloroplastic OS=Flav... [more]
MAOC_MAIZE2.697e-3082.89NADP-dependent malic enzyme, chloroplastic OS=Zea ... [more]
MAOX_PIG2.988e-2165.79NADP-dependent malic enzyme (Fragment) OS=Sus scro... [more]

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Properties
Property NameValue
Genbank descriptionC06054C09 RindPdigS Citrus sinensis cDNA clone N10A03, mRNA sequence.