GR312943
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL20_SCHPO (60S ribosomal protein L20 OS=Schizosaccharomyces pombe GN=rpl20a PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 1.898e-22 Identity = 54/83 (65.06%), Postives = 62/83 (74.70%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKV---GKKVFAYSRPS 240 KEFR+ +R AVEA+Y DMAARHR+RF SI ILKVVE+E + +RR Y+KQLL LKFPLPHR G V GKKVFA RPS Sbjct: 91 KEFRDTTRVGAVEAMYADMAARHRARFRSIRILKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPS 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL20_YEAST (60S ribosomal protein L20 OS=Saccharomyces cerevisiae GN=RPL20A PE=1 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 5.522e-22 Identity = 51/80 (63.75%), Postives = 59/80 (73.75%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 KE R++SR AVE LYQDMAARHR+RF SIHILKV EIE ++R Y+KQ L KDLKFPLPHR + K F+Y RPS Sbjct: 92 KEIRDVSRVAAVETLYQDMAARHRARFRSIHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRV--QKSTKTFSYKRPS 169
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_SALSA (60S ribosomal protein L18a OS=Salmo salar GN=rpl18a PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.766e-12 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R+++ + AV Y+DM ARHR+R SIHI+KV EI N RRP IKQ +KFPLPHR + F RP+ Sbjct: 95 REYRDLTTSAAVTQCYRDMGARHRARAHSIHIMKVQEIAAN-KCRRPAIKQFHDSKIKFPLPHRVLRRQHNPRFTTKRPN 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.480e-11 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R+++ AV Y+DM ARHR+R SI I+KV EI + RRP +KQ +KFPLPHR + K F RP+ Sbjct: 95 REYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAS-KCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_BOVIN (60S ribosomal protein L18a OS=Bos taurus GN=RPL18A PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.480e-11 Identity = 35/80 (43.75%), Postives = 48/80 (60.00%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R+++ AV Y+DM ARHR+R SI I+KV EI + RRP +KQ +KFPLPHR + K F RP+ Sbjct: 95 REYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAS-KCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_SPOFR (60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.769e-11 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R++S AV Y+DM ARHR+R SI I+K VE+ + RRP +KQ ++FPLP R FAY RPS Sbjct: 95 REYRDLSVGGAVTQCYRDMGARHRARAHSIQIIK-VEVIKASACRRPQVKQFHNSTIRFPLPKRVHHHKRLNTFAYKRPS 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_RAT (60S ribosomal protein L18a OS=Rattus norvegicus GN=Rpl18a PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.769e-11 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R+++ AV Y+DM ARHR+R SI I+KV EI RRP +KQ +KFPLPHR + K F RP+ Sbjct: 95 REYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAG-KCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173
BLAST of GR312943 vs. ExPASy Swiss-Prot
Match: RL18A_MOUSE (60S ribosomal protein L18a OS=Mus musculus GN=Rpl18a PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.769e-11 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = -2 Query: 1 KEFREMSRTDAVEALYQDMAARHRSRFGSIHILKVVEIENNDSIRRPYIKQLLQKDLKFPLPHRAGGKVGKKVFAYSRPS 240 +E+R+++ AV Y+DM ARHR+R SI I+KV EI RRP +KQ +KFPLPHR + K F RP+ Sbjct: 95 REYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAAG-KCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPN 173 The following BLAST results are available for this feature:
BLAST of GR312943 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
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