GO241939

Overview
NameGO241939
Unique NameGO241939
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1684 contig Csv1_Contig1684:1333..1751. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_GLYEC (Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza echinata GN=CYP73A14 PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 7.910e-29
Identity = 61/76 (80.26%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSK+DTAEKGGQFSLHILKHSTIVAKPRSF
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKLDTAEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_POPTM (Trans-cinnamate 4-monooxygenase OS=Populus tremuloides GN=CYP73A13 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 61/76 (80.26%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_POPKI (Trans-cinnamate 4-monooxygenase OS=Populus kitakamiensis GN=CYP73A16 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.033e-28
Identity = 61/76 (80.26%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_CICAR (Trans-cinnamate 4-monooxygenase OS=Cicer arietinum GN=CYP73A19 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 1.349e-28
Identity = 61/76 (80.26%), Postives = 61/76 (80.26%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIV KPRSF
Sbjct:  429 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVCKPRSF 504          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_PEA (Trans-cinnamate 4-monooxygenase OS=Pisum sativum GN=CYP73A9 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 2.301e-28
Identity = 60/76 (78.95%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPR+F
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_HELTU (Trans-cinnamate 4-monooxygenase OS=Helianthus tuberosus GN=CYP73A1 PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.301e-28
Identity = 61/76 (80.26%), Postives = 61/76 (80.26%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQSKIDT EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTDEKGGQFSLHILKHSTIVAKPRSF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_SOYBN (Trans-cinnamate 4-monooxygenase OS=Glycine max GN=CYP73A11 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 3.006e-28
Identity = 60/76 (78.95%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  431 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_PHAAU (Trans-cinnamate 4-monooxygenase OS=Phaseolus aureus GN=CYP73A2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 3.926e-28
Identity = 59/76 (77.63%), Postives = 62/76 (81.58%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPGQS+IDT+EKGGQFSLHILKHST+VAKPRSF
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITLGRLVQNFELLPPPGQSQIDTSEKGGQFSLHILKHSTVVAKPRSF 505          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_MEDSA (Trans-cinnamate 4-monooxygenase OS=Medicago sativa GN=CYP73A3 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.696e-28
Identity = 60/76 (78.95%), Postives = 61/76 (80.26%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQN ELLPPPGQSKIDT+EKGGQFSLHILKHSTIVAKPRSF
Sbjct:  431 ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNVELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRSF 506          
BLAST of GO241939 vs. ExPASy Swiss-Prot
Match: TCMO_CATRO (Trans-cinnamate 4-monooxygenase OS=Catharanthus roseus GN=CYP73A4 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 2.544e-27
Identity = 58/76 (76.32%), Postives = 61/76 (80.26%), Query Frame = 3
Query:    3 ANGNDFRYLPFGVGRRSCPXXXXXXXXXXXXXXRLVQNFELLPPPGQSKIDTAEKGGQFSLHILKHSTIVAKPRSF 230
            ANGNDFRYLPFGVGRRSCP              RLVQNFELLPPPG+SKIDT+EKGGQFSLHILKHSTIV KPR+F
Sbjct:  430 ANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGKSKIDTSEKGGQFSLHILKHSTIVLKPRTF 505          
The following BLAST results are available for this feature:
BLAST of GO241939 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
TCMO_GLYEC7.910e-2980.26Trans-cinnamate 4-monooxygenase OS=Glycyrrhiza ech... [more]
TCMO_POPTM1.033e-2880.26Trans-cinnamate 4-monooxygenase OS=Populus tremulo... [more]
TCMO_POPKI1.033e-2880.26Trans-cinnamate 4-monooxygenase OS=Populus kitakam... [more]
TCMO_CICAR1.349e-2880.26Trans-cinnamate 4-monooxygenase OS=Cicer arietinum... [more]
TCMO_PEA2.301e-2878.95Trans-cinnamate 4-monooxygenase OS=Pisum sativum G... [more]
TCMO_HELTU2.301e-2880.26Trans-cinnamate 4-monooxygenase OS=Helianthus tube... [more]
TCMO_SOYBN3.006e-2878.95Trans-cinnamate 4-monooxygenase OS=Glycine max GN=... [more]
TCMO_PHAAU3.926e-2877.63Trans-cinnamate 4-monooxygenase OS=Phaseolus aureu... [more]
TCMO_MEDSA6.696e-2878.95Trans-cinnamate 4-monooxygenase OS=Medicago sativa... [more]
TCMO_CATRO2.544e-2776.32Trans-cinnamate 4-monooxygenase OS=Catharanthus ro... [more]

Pages

back to top
Properties
Property NameValue
Genbank description587 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 729 5, mRNA sequence.