GO241859

Overview
NameGO241859
Unique NameGO241859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13405 contig Csv1_Contig13405:35..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATO_YEAST (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae GN=PPA1 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.584e-44
Identity = 86/169 (50.89%), Postives = 124/169 (73.37%), Query Frame = 1
Query:   94 GESGSWSRALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQAS 600
            G   ++ + L++ SPY ++ +GIA+ +G+SV+GAAWGI+ITGSS+IGA ++APRIT+KNLIS+IFCE              +KL    A  +Y+  +L  GY++F +GI VG +NL+CG+ VGI G++ A+SDA +S+LFVKIL IEIFGS LGL G+IVG++M+ +AS
Sbjct:   42 GSDINFGKFLLRTSPYMWANLGIALCVGLSVVGAAWGIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSKSNLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLLGLIVGLLMAGKAS 210          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATO_SCHPO (Probable V-type proton ATPase 20 kDa proteolipid subunit OS=Schizosaccharomyces pombe GN=vma16 PE=2 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.873e-43
Identity = 83/169 (49.11%), Postives = 114/169 (67.46%), Query Frame = 1
Query:   94 GESGSWSRALVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQAS 600
            GES  +   L+  SPYT+  +GIA  +   ++GAAWGI+I G+S++G A+KAPRI +KNLIS+IFCE              AK+  +  +  Y       G+A+F  GI VG  NL+CG+CVGI GSS AL+DAQ++SLFVK+L +EIFGS LGLFG+IVG+++  +AS
Sbjct:   28 GESFDFGSFLLDTSPYTWGLLGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISIIFCEVVAIYSLIIAIVFSAKINDINPAGFYTKSHYYTGFALFWGGITVGLCNLICGVCVGITGSSAALADAQDASLFVKVLVVEIFGSVLGLFGLIVGLLIGGKAS 196          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATO_MOUSE (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus GN=Atp6v0b PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.561e-41
Identity = 84/160 (52.50%), Postives = 114/160 (71.25%), Query Frame = 1
Query:  121 LVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQ 594
            L + SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCE            +    E   A++  A    +  AGY++F +G+ VG +NL CG+CVGI+GS  AL+DAQN SLFVKIL +EIFGSA+GLFGVIV I+ +++
Sbjct:   41 LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATEPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATO_HUMAN (V-type proton ATPase 21 kDa proteolipid subunit OS=Homo sapiens GN=ATP6V0B PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.781e-41
Identity = 84/160 (52.50%), Postives = 113/160 (70.62%), Query Frame = 1
Query:  121 LVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQ 594
            L + SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCE            +    E   A+   A    +  AGY++F +G+ VG +NL CG+CVGI+GS  AL+DAQN SLFVKIL +EIFGSA+GLFGVIV I+ +++
Sbjct:   41 LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATO_BOVIN (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus GN=ATP6V0B PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.781e-41
Identity = 84/160 (52.50%), Postives = 113/160 (70.62%), Query Frame = 1
Query:  121 LVKISPYTFSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYA--PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQ 594
            L + SP+ +S +GI +AI +SV+GAAWGIYITGSS+IG  +KAPRI +KNL+S+IFCE            +    E   A+   A    +  AGY++F +G+ VG +NL CG+CVGI+GS  AL+DAQN SLFVKIL +EIFGSA+GLFGVIV I+ +++
Sbjct:   41 LTETSPFMWSNLGIGLAISLSVVGAAWGIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIGHRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIGLFGVIVAILQTSR 200          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+               + A + S   +    P  L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   LFV ++ I IF  AL L+G+IVGII+S++A
Sbjct:   14 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA-----GVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+               + A + S   +    P  L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   LFV ++ I IF  AL L+G+IVGII+S++A
Sbjct:   14 FGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA-----GVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.787e-14
Identity = 48/151 (31.79%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+               + A + S   +    P  L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   LFV ++ I IF  AL L+G+IVGII+S++A
Sbjct:   14 FGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMA-----GVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_TOBAC (V-type proton ATPase 16 kDa proteolipid subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+               +   +   P ++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   LFV ++ I IF  AL L+G+IVGII+S++A
Sbjct:   14 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PKTKSYY---LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 159          
BLAST of GO241859 vs. ExPASy Swiss-Prot
Match: VATL_SOLLC (V-type proton ATPase 16 kDa proteolipid subunit OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.639e-14
Identity = 47/151 (31.13%), Postives = 78/151 (51.66%), Query Frame = 1
Query:  145 FSAIGIAVAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEXXXXXXXXXXXXLQAKLESVPASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILAIEIFGSALGLFGVIVGIIMSAQA 597
            F  +G A A+  S +GAA+G   +G  +    +  P +  K+++ V+               +   +   P ++ Y    L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   LFV ++ I IF  AL L+G+IVGII+S++A
Sbjct:   13 FGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGIN--PKTKSYY---LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRA 158          
The following BLAST results are available for this feature:
BLAST of GO241859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
VATO_YEAST2.584e-4450.89V-type proton ATPase subunit c'' OS=Saccharomyces ... [more]
VATO_SCHPO4.873e-4349.11Probable V-type proton ATPase 20 kDa proteolipid s... [more]
VATO_MOUSE4.561e-4152.50V-type proton ATPase 21 kDa proteolipid subunit OS... [more]
VATO_HUMAN7.781e-4152.50V-type proton ATPase 21 kDa proteolipid subunit OS... [more]
VATO_BOVIN7.781e-4152.50V-type proton ATPase 21 kDa proteolipid subunit OS... [more]
VATL_AVESA1.251e-1431.79V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ2.787e-1431.79V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI2.787e-1431.79V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_TOBAC3.639e-1431.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_SOLLC3.639e-1431.13V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank description507 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 644 5, mRNA sequence.