GO241521

Overview
NameGO241521
Unique NameGO241521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
GO241521_ssr7 microsatellite GO241521_ssr7:7..21. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2614 contig Csv1_Contig2614:123..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.372e-19
Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 280
            VKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NCTCG
Sbjct:   17 VKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          

HSP 2 Score: 40.0466 bits (92), Expect = 7.372e-19
Identity = 14/16 (87.50%), Postives = 16/16 (100.00%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MSDTCGNCDCAD++QC
Sbjct:    1 MSDTCGNCDCADKTQC 16          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.543e-14
Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCGS 283
            VKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:   16 VKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          

HSP 2 Score: 33.8834 bits (76), Expect = 4.543e-14
Identity = 11/13 (84.62%), Postives = 12/13 (92.31%), Query Frame = 1
Query:   94 TCGNCDCADRSQC 132
            TCGNCDC D+SQC
Sbjct:    3 TCGNCDCVDKSQC 15          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.904e-14
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 277
            VKKG+S   D VETD S++  VV M V AAE+ G CKCG +C CVNCTC
Sbjct:   17 VKKGNSI--DIVETDKSYIEDVV-MGVPAAESGGKCKCGTSCPCVNCTC 62          

HSP 2 Score: 37.7354 bits (86), Expect = 5.904e-14
Identity = 14/16 (87.50%), Postives = 14/16 (87.50%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MSD CGNCDCAD SQC
Sbjct:    1 MSDKCGNCDCADSSQC 16          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 8.554e-12
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 2
Query:  134 KKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTC 277
            KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:   18 KKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          

HSP 2 Score: 31.9574 bits (71), Expect = 8.554e-12
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MS  C NCDC+D SQC
Sbjct:    1 MSSKCSNCDCSDSSQC 16          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 1.443e-11
Identity = 28/50 (56.00%), Postives = 34/50 (68.00%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 280
            VKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+CTCG
Sbjct:   17 VKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          

HSP 2 Score: 31.187 bits (69), Expect = 1.443e-11
Identity = 11/16 (68.75%), Postives = 12/16 (75.00%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MS  C NCDCAD +QC
Sbjct:    1 MSGKCDNCDCADSTQC 16          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 5.336e-11
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 280
            VKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:   17 VKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          

HSP 2 Score: 38.891 bits (89), Expect = 5.336e-11
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MSD CGNCDCAD+SQC
Sbjct:    1 MSDKCGNCDCADKSQC 16          
BLAST of GO241521 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 5.336e-11
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 2
Query:  131 VKKGSSYAADFVETDLSFVSTVVVMDVQAAETEGNCKCGPTCACVNCTCG 280
            VKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:   17 VKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          

HSP 2 Score: 38.891 bits (89), Expect = 5.336e-11
Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 1
Query:   85 MSDTCGNCDCADRSQC 132
            MSD CGNCDCAD+SQC
Sbjct:    1 MSDKCGNCDCADKSQC 16          
The following BLAST results are available for this feature:
BLAST of GO241521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
MT3_CARPA7.372e-1964.00Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC4.543e-1454.90Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE5.904e-1461.22Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV8.554e-1256.25Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.443e-1156.00Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ5.336e-1144.00Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI5.336e-1144.00Metallothionein-like protein 3A OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank description169 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 278 5, mRNA sequence.