GO241515
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHMP1_DICDI (Charged multivesicular body protein 1 OS=Dictyostelium discoideum GN=chmp1 PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.132e-27 Identity = 63/140 (45.00%), Postives = 91/140 (65.00%), Query Frame = 1 Query: 127 NQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTP 546 NQ+ LKFTSK L++Q GNMDGARIYA+N+IR++ + +NYLRLASR+DAV +R++T +M ++ SMANIVKS+E S+ +L+K+++ MD FE+QF + E+AM +T+LSTP Sbjct: 3 NQLFQLKFTSKQLEKQSKKSEQSEKAQKIKLKKAIEQGNMDGARIYAQNAIREKNQSLNYLRLASRIDAVASRVETAIRMKSVTGSMANIVKSMEKSMRNMDLEKITQVMDQFERQFEDLDVQSVYVENAMNQTTTLSTP 142 HSP 2 Score: 21.1718 bits (43), Expect = 1.132e-27 Identity = 8/15 (53.33%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 554 EVNSLMQQVADDYGL 598 +V+ L+ QVAD++GL Sbjct: 145 QVDLLISQVADEHGL 159
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_BOVIN (Charged multivesicular body protein 1b OS=Bos taurus GN=CHMP1B PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.397e-24 Identity = 59/150 (39.33%), Postives = 89/150 (59.33%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPEG 552 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L T NL+K+S MD FE QF T + E M+ +T+L+TP+G Sbjct: 1 MSNMEK---HLFNLKFAAKELGRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQG 147 HSP 2 Score: 23.483 bits (49), Expect = 1.397e-24 Identity = 8/18 (44.44%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 +G+V+ L+Q++AD+ GL+ Sbjct: 146 QGQVDMLLQEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_DANRE (Charged multivesicular body protein 1b OS=Danio rerio GN=chmp1b PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 3.080e-24 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPEG 552 M + EK + +LKF +K LQR GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VK ++++L + NL+K+S M+ FE+QF T + + E +M+ +T+L+TP+G Sbjct: 1 MSSMEK---HLFNLKFAAKELQRNSKKCDKEEKAEKVKVKKAIQKGNMEVARIHAENAIRQKNQSVNFLRMSARVDAVAARVQTAVTMNQVTKSMAGVVKGMDATLKSMNLEKISGLMEKFERQFETLDVQTAQMEDSMSSTTTLTTPQG 147 HSP 2 Score: 23.483 bits (49), Expect = 3.080e-24 Identity = 8/18 (44.44%), Postives = 16/18 (88.89%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 +G+V++LM ++AD+ GL+ Sbjct: 146 QGQVDTLMMEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_HUMAN (Charged multivesicular body protein 1b OS=Homo sapiens GN=CHMP1B PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.947e-23 Identity = 58/149 (38.93%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L T NL+K+S MD FE QF T + E M+ +T+L+TP+ Sbjct: 1 MSNMEK---HLFNLKFAAKELSRSAKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKTMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146 HSP 2 Score: 21.1718 bits (43), Expect = 1.947e-23 Identity = 7/18 (38.89%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 + +V+ L+Q++AD+ GL+ Sbjct: 146 QNQVDMLLQEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_CHICK (Charged multivesicular body protein 1b OS=Gallus gallus GN=CHMP1B PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 4.290e-23 Identity = 57/149 (38.26%), Postives = 89/149 (59.73%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF T + E+ M+ +T+L+TP+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRNSKRCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMENTMSNTTTLTTPQ 146 HSP 2 Score: 21.1718 bits (43), Expect = 4.290e-23 Identity = 7/18 (38.89%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 + +V+ L+Q++AD+ GL+ Sbjct: 146 QNQVDMLLQEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CH1B1_MOUSE (Charged multivesicular body protein 1b-1 OS=Mus musculus GN=Chmp1b1 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 7.263e-23 Identity = 57/149 (38.26%), Postives = 88/149 (59.06%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M N EK + +LKF +K L R GNM+ ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF T + E M+ +T+L+TP+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRSSKKCDKEEKAEKAKIKKAIQKGNMEVARIHAENAIRQKNQGVNFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146 HSP 2 Score: 21.1718 bits (43), Expect = 7.263e-23 Identity = 7/18 (38.89%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 + +V+ L+Q++AD+ GL+ Sbjct: 146 QNQVDMLLQEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CH1B2_MOUSE (Charged multivesicular body protein 1b-2 OS=Mus musculus GN=Chmp1b2 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 2.709e-22 Identity = 56/149 (37.58%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M N EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF T + E M+ +T+L+TP+ Sbjct: 1 MSNMEK---HLFNLKFAAKELNRNAKKCDKEEKAEKAKIKKAIQKGNTEVARIHAENAIRQKNQAINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLRSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSSTTTLTTPQ 146 HSP 2 Score: 21.1718 bits (43), Expect = 2.709e-22 Identity = 7/18 (38.89%), Postives = 15/18 (83.33%), Query Frame = 2 Query: 548 RGEVNSLMQQVADDYGLE 601 + +V+ L+Q++AD+ GL+ Sbjct: 146 QNQVDMLLQEMADEAGLD 163
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_XENTR (Charged multivesicular body protein 1b OS=Xenopus tropicalis GN=chmp1b PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.589e-21 Identity = 55/149 (36.91%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M + EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF T + E M+ +T+L+TP+ Sbjct: 1 MSSMEK---NLFNLKFAAKELHRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDTTLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQ 146
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1B_XENLA (Charged multivesicular body protein 1b OS=Xenopus laevis GN=chmp1b PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.589e-21 Identity = 55/149 (36.91%), Postives = 87/149 (58.39%), Query Frame = 1 Query: 103 MGNTEKLLNQIMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 M + EK + +LKF +K L R GN + ARI+AEN+IR++ + +N+LR+++R+DAV AR+ T M + KSMA +VKS++++L + NL+K+S MD FE QF T + E M+ +T+L+TP+ Sbjct: 1 MSSMEK---HLFNLKFAAKELNRNAKKCEKEEKTEKAKIKKAIQKGNTEIARIHAENAIRQKNQGINFLRMSARVDAVAARVQTAVTMGKVTKSMAGVVKSMDATLKSMNLEKISALMDKFEHQFETLDVQTQQMEDTMSNTTTLTTPQ 146
BLAST of GO241515 vs. ExPASy Swiss-Prot
Match: CHM1A_PONAB (Charged multivesicular body protein 1a OS=Pongo abelii GN=CHMP1A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.293e-21 Identity = 51/139 (36.69%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 133 IMDLKFTSKSLQRQXXXXXXXXXXXXXXXXXXXXXGNMDGARIYAENSIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTINKSMANIVKSLESSLATGNLQKMSETMDSFEKQFVTWRFKQSSWESAMAGSTSLSTPE 549 + LKFT+K L++ N++ AR+YAEN+IRK+ E +N+LR+ASR+DAV +++ T M + K+MA + K+L+ +L+T +LQK+S MD FE+Q S E +M+ +T+L+TP+ Sbjct: 5 LFQLKFTAKQLEKLAKKAEKDSKAEQAKVKKALLQKNVECARVYAENAIRKKNEGVNWLRMASRVDAVASKVQTAVTMKGVTKNMAQVTKALDKALSTMDLQKVSSVMDRFEQQVQNLDVHTSVMEDSMSSATTLTTPQ 143 HSP 2 Score: 21.9422 bits (45), Expect = 8.293e-21 Identity = 8/16 (50.00%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 554 EVNSLMQQVADDYGLE 601 +V+SL+ Q+A++ GLE Sbjct: 145 QVDSLIMQIAEENGLE 160 The following BLAST results are available for this feature:
BLAST of GO241515 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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