GO241512

Overview
NameGO241512
Unique NameGO241512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7528 contig Csv1_Contig7528:32..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.459e-52
Identity = 104/152 (68.42%), Postives = 112/152 (73.68%), Query Frame = 3
Query:  141 VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            V +  S+S KDY DPPPEPLFDA EL KWSFYRALIAEFIA            IGYKSQTDPA N D   GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKV+  RAVMYMVAQCL     V  L KA + +Y+  YG G
Sbjct:    6 VGDKRSFSGKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGYKSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGV-ALVKAFQSAYFTRYGGG 156          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP22_ORYSJ (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 4.525e-49
Identity = 104/162 (64.20%), Postives = 113/162 (69.75%), Query Frame = 3
Query:  123 MAKD--TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD      E G +SAKDYTDPPP PL D  ELTKWS YRA+IAEFIA            IGYK Q+D   N   +A  GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RAV+Y++AQCL     V GL K  + SYY  YG G
Sbjct:    1 MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYIIAQCLGAICGV-GLVKGFQSSYYARYGGG 161          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.246e-48
Identity = 102/163 (62.58%), Postives = 114/163 (69.94%), Query Frame = 3
Query:  123 MAKD---TGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD      AE G Y AKDY+DPPP PL DA ELTKWS YRA+IAEF+A            IGYK Q+DP  N   +A  GVGILGIAWAFGGMIF+LVYCTAG+SGGHINPAVTFGLFLARKVS  RAV+Y+VAQ L     V GL K  + ++Y  YG G
Sbjct:    1 MAKDIEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGV-GLVKGFQSAFYVRYGGG 162          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP23_MAIZE (Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.933e-48
Identity = 100/152 (65.79%), Postives = 111/152 (73.03%), Query Frame = 3
Query:  147 EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            E G +SAKDYTDPPP PL DA ELTKWS YRA+IAEFIA            IGYK QTD A +   +A  GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y++AQCL     V GL K  + +YY  YG G
Sbjct:   12 EAGEFSAKDYTDPPPAPLIDADELTKWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDAAASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGV-GLVKGFQSAYYVRYGGG 162          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP24_MAIZE (Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 3.831e-48
Identity = 102/162 (62.96%), Postives = 116/162 (71.60%), Query Frame = 3
Query:  123 MAKDTGVA--EHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD   +  E G +SAKDYTDPPP PL DA ELT+WS YRA+IAEFIA            IGYK QTD + +   +A  GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y++AQCL     V GL K  + +YY  YG G
Sbjct:    1 MAKDIEASGPEAGEFSAKDYTDPPPAPLIDAEELTQWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGPDAACGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYIIAQCLGAICGV-GLVKGFQSAYYVRYGGG 161          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP27_MAIZE (Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.224e-47
Identity = 102/165 (61.82%), Postives = 112/165 (67.88%), Query Frame = 3
Query:  123 MAKDTG-VAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA---GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXGXXT 605
            MAKD   V E G YSAKDY DPPP PL D  ELTKWS YRA IAEFIA            IGYK Q+D    + G+    GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFL RKVS  RA++YM+AQC    +   GL K  +KS+Y  YG G  T
Sbjct:    1 MAKDVEQVTEQGEYSAKDYHDPPPAPLIDPDELTKWSLYRAAIAEFIATLLFLYITVLTIIGYKRQSDT--KIPGNTECDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLVRALLYMIAQCAGA-ICGAGLAKGFQKSFYNRYGGGVNT 162          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP22_MAIZE (Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.224e-47
Identity = 102/165 (61.82%), Postives = 114/165 (69.09%), Query Frame = 3
Query:  123 MAKDTGV---AEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGS----AGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            M KD  V   A  G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +  G+     GVG+LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVS  RA++YMVAQCL     V GL KA + +Y+  YG G
Sbjct:    1 MGKDDVVQSGAGGGEFAAKDYTDPPPAPLVDAAELGSWSLYRAVIAEFIATLLFLYVTVATVIGYKHQTDASASGAGADAACGGVGVLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMVAQCLGAVCGV-GLVKAFQSAYFDRYGGG 164          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP21_ORYSJ (Probable aquaporin PIP2-1 OS=Oryza sativa subsp. japonica GN=PIP2-1 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.232e-46
Identity = 96/153 (62.75%), Postives = 110/153 (71.90%), Query Frame = 3
Query:  153 GSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSA--GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXGXXT 605
            G ++AKDYTDPPP PL DA EL  WS YRA+IAEFIA            IGYK QTD + +   +A  GVG+LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RA++Y+VAQCL     V GL KA + +Y+  YG G  T
Sbjct:   14 GEFAAKDYTDPPPAPLIDAAELGSWSLYRAVIAEFIATLLFLYITVATVIGYKHQTDASASGADAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAICGV-GLVKAFQSAYFNRYGGGANT 165          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP22_ARATH (Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 185.652 bits (470), Expect = 1.609e-46
Identity = 99/158 (62.66%), Postives = 107/158 (67.72%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD    E   +  +DY DPPP P FDA ELTKWS YRA+IAEF+A            IGYK Q+D         GVGILGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGLFLARKVS  RAV+YMVAQCL     V G  KA + SYY  YG G
Sbjct:    1 MAKDVEGPE--GFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGV-GFVKAFQSSYYDRYGGG 155          
BLAST of GO241512 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.102e-46
Identity = 97/158 (61.39%), Postives = 106/158 (67.09%), Query Frame = 3
Query:  123 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIAXXXXXXXXXXXXIGYKSQTDPAKNVDGSAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSFGRAVMYMVAQCLWCNLPVXGLXKAXKKSYYXXYGXG 596
            MAKD  V E G  +A+DY DPPP P FD  EL KW  YRA+IAEF+A            IGYK+QTD         GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVT GLFLARKVS  R V+Y+VAQCL   +   G  KA + SYY  YG G
Sbjct:    1 MAKDLDVNESGPPAARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGA-ICGCGFVKAFQSSYYTRYGGG 157          
The following BLAST results are available for this feature:
BLAST of GO241512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PIP25_ARATH7.459e-5268.42Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP22_ORYSJ4.525e-4964.20Probable aquaporin PIP2-2 OS=Oryza sativa subsp. j... [more]
PIP23_ORYSJ2.246e-4862.58Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP23_MAIZE2.933e-4865.79Aquaporin PIP2-3 OS=Zea mays GN=PIP2-3 PE=2 SV=1[more]
PIP24_MAIZE3.831e-4862.96Aquaporin PIP2-4 OS=Zea mays GN=PIP2-4 PE=1 SV=1[more]
PIP27_MAIZE7.224e-4761.82Aquaporin PIP2-7 OS=Zea mays GN=PIP2-7 PE=2 SV=1[more]
PIP22_MAIZE7.224e-4761.82Aquaporin PIP2-2 OS=Zea mays GN=PIP2-2 PE=2 SV=1[more]
PIP21_ORYSJ1.232e-4662.75Probable aquaporin PIP2-1 OS=Oryza sativa subsp. j... [more]
PIP22_ARATH1.609e-4662.66Aquaporin PIP2-2 OS=Arabidopsis thaliana GN=PIP2-2... [more]
PIP24_ARATH2.102e-4661.39Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]

Pages

back to top
Properties
Property NameValue
Genbank description160 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 268 5, mRNA sequence.