GO241488

Overview
NameGO241488
Unique NameGO241488
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13730 contig Csv1_Contig13730:1..602. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241488 vs. ExPASy Swiss-Prot
Match: YGNB_SCHPO (Putative nucleosome assembly protein C2D10.11C OS=Schizosaccharomyces pombe GN=SPBC2D10.11c PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 9.855e-12
Identity = 35/102 (34.31%), Postives = 62/102 (60.78%), Query Frame = 1 
Query:  223 DEGARADLVGVLKN----------KLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVKGVVEGAPNEV 498
            D+ A  ++ G+L+N          +L +L G+ S  +E L PAV+ R+  L+ +Q + D ++ +F ++   LE KY+K YQP++++R EI+KGV E   +E+
Sbjct:   48 DKSAHDEVSGLLRNNPAMLSMIEGRLSSLVGKSSGYIESLAPAVQNRITALKGLQKDCDAIQYEFRQKMLDLETKYEKKYQPIFSRRAEIIKGVSEPVDDEL 149
The following BLAST results are available for this feature:
BLAST of GO241488 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YGNB_SCHPO9.855e-1234.31Putative nucleosome assembly protein C2D10.11C OS=... [more]
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Properties
Property NameValue
Genbank description136 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 233 5, mRNA sequence.