GO241446
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 4.056e-66 Identity = 123/161 (76.40%), Postives = 130/161 (80.75%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSWYTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAAFTPK 490 WAMLGAAGIF +G T PSWYT G + TLFIVE++ IGWAEG RWADIIKPGCVNTDP FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTG GPIDN A LADPGHA +FAAF+PK Sbjct: 113 WAMLGAAGIFIP-ELLTKIGILNT-PSWYTA-GEQEYFTDTTTLFIVELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 249.98 bits (637), Expect = 9.035e-66 Identity = 121/161 (75.16%), Postives = 130/161 (80.75%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSWYTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAAFTPK 490 WAMLGAAGIF +G T PSWYT G + TLF++E++ IGWAEG RWADIIKPGCVNTDP FPNNKLTGTDVGYPGGLWFDPLGWGSGSP K+KELRTKEIKNGRLAMLAVMGAWFQHIYTG GPIDN A LADPGHA +FAAF+PK Sbjct: 113 WAMLGAAGIFIPEFL-TKIGVLNT-PSWYTA-GEQEYFTDTTTLFVIELVLIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 270
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB24_PEA (Chlorophyll a-b binding protein P4, chloroplastic OS=Pisum sativum GN=lhcA-P4 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 63/151 (41.72%), Postives = 80/151 (52.98%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSWYTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGH 460 WAMLG AG+ ++G +P WY G + TLF++E I + E RW DI PG VN DP F L +VGYPGG+ F+PL + E + KEI NGRLAMLA +G QH TG GP DN + ++DP H Sbjct: 101 WAMLGVAGMLLP-EVFTSIGII-NVPKWYAA-GKEEYFASSSTLFVIEFILSHYVEIRRWQDIKNPGSVNQDPIFKQYSLPAGEVGYPGGI-FNPLNFA-----PTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHISDPWH 242
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB24_ARATH (Chlorophyll a-b binding protein 4, chloroplastic OS=Arabidopsis thaliana GN=CAB4 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 63/158 (39.87%), Postives = 82/158 (51.90%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSWYTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAAF 481 WAMLG AG+ +G +P WY G + TLF++E I + E RW DI PG VN DP F L +VGYPGG+ F+PL + +E + KE+ NGRLAMLA +G QH TG GP +N + L+DP H + F Sbjct: 102 WAMLGVAGMLLP-EVFTKIGII-NVPEWYDA-GKEQYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPKGEVGYPGGI-FNPLNFA-----PTQEAKEKELANGRLAMLAFLGFVVQHNVTGKGPFENLLQHLSDPWHNTIVQTF 250
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.112e-18 Identity = 51/109 (46.79%), Postives = 67/109 (61.47%), Query Frame = 2 Query: 134 TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADP 454 TLF++EM +G+AE R+ D KPG + K G D YPGG F+PLG+G + +KEL+ KEIKNGRLAMLA++G + Q + TG GP N + LADP Sbjct: 154 TLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDE-KSMKELKLKEIKNGRLAMLAILGYFIQALVTGVGPYQNLLDHLADP 261
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.666e-17 Identity = 48/109 (44.04%), Postives = 68/109 (62.39%), Query Frame = 2 Query: 134 TLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGT--DVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADP 454 TLF++EM +G+AE R+ D KPG + K G + YPGG +F+PLG+G + +KEL+ KE+KNGRLAMLA++G + Q + TG GP N + +ADP Sbjct: 156 TLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDE-KSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADP 263
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB120_HORVU (Chlorophyll a-b binding protein 1B-20, chloroplastic (Fragment) OS=Hordeum vulgare GN=LHC Ib-20 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.617e-14 Identity = 60/159 (37.74%), Postives = 73/159 (45.91%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTL--------PSWYTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGH 460 WAMLG AG+ P L P W G + T V M + E RW DI PG VN DP F + L + GYPG + F+PL + +P + KE KE+ NGRLAMLA +G QH G GP +N LADP H Sbjct: 81 WAMLGVAGML----------IPEVLTKAGLMNAPEWLRLPGKETYFASSSTALRVHMSST-YVEIRRWQDIKNPGSVNQDPIFKSYSLPPHECGYPGRV-FNPLNF---APLENKE---KELANGRLAMLAFLGFLVQHNVHGKGPFENLQQHLADPWH 221
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.050e-13 Identity = 65/177 (36.72%), Postives = 75/177 (42.37%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSW--------------YTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAA---FTP 487 WA+LGA GI G P W Y G A + Q V+++ +G EG R VN P G D YPG FDPLG P+ EL+ KEIKNGRLAM + G + Q I TG GPI N LADPG FAA FTP Sbjct: 94 WALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYR---------VNGGPAGE-----GLDPLYPGES-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLADPGTNNAFAAATKFTP 254
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.512e-12 Identity = 62/177 (35.03%), Postives = 78/177 (44.07%), Query Frame = 2 Query: 8 WAMLGAAGIFHSGNC*QNLGXPPTLPSW--------------YTGWGARVLHQTPPTLFIVEMIFIGWAEGXRWADIIKPGCVNTDPXFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAA---FTP 487 WA+LGA GI Q G P W Y G + + Q+ V+++ +G AE R A+ G L D YPGG FDPLG P+ EL+ KEIKNGRLAM + +G + Q I TG GP+ N LADP FA+ FTP Sbjct: 89 WALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYR-ANGGSEGF-----------LDDLDTLYPGGP-FDPLGLAD-DPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLADPTVNKAFASATKFTP 251
BLAST of GO241446 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.811e-12 Identity = 40/77 (51.95%), Postives = 48/77 (62.34%), Query Frame = 2 Query: 254 TDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGXGPIDNXIAXLADPGHAXVFAAFT 484 TD YPGG FDPLG PE EL+ KEIKNGRLAM ++ G + Q I TG GP+DN + LADP + +A T Sbjct: 187 TDPLYPGGS-FDPLGLAD-DPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLDNLVDHLADPVNNNAWAYAT 261 The following BLAST results are available for this feature:
BLAST of GO241446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pagesback to topProperties
|