GO241445

Overview
NameGO241445
Unique NameGO241445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of GO241445 vs. ExPASy Swiss-Prot
Match: P2C57_ARATH (Protein phosphatase 2C 57 OS=Arabidopsis thaliana GN=PPH1 PE=2 SV=2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.624e-19
Identity = 28/51 (54.90%), Postives = 33/51 (64.71%), Query Frame = 3
Query:    3 WDYMNSSDAVKFVRNQLXQHGDVQLACEXXXXXXXXXXXXXNISIVIADXG 155
            WDYM SSD V +VR+QL +HG+VQLACE             NISI+IAD G
Sbjct:  299 WDYMKSSDVVSYVRDQLRKHGNVQLACESLAQVALDRRSQDNISIIIADLG 349          

HSP 2 Score: 56.9954 bits (136), Expect = 1.624e-19
Identity = 27/42 (64.29%), Postives = 34/42 (80.95%), Query Frame = 1
Query:  241 ILDVSRQTDWRNLPLQQQNVVYELAQAFATIGIVSLGIWMSS 366
            I D+ R T+W+NLP Q+QNVV EL QA  TIG+V++GIWMSS
Sbjct:  345 IADLGR-TEWKNLPAQRQNVVVELVQAATTIGLVTVGIWMSS 385          
BLAST of GO241445 vs. ExPASy Swiss-Prot
Match: P2C05_ORYSJ (Probable protein phosphatase 2C 5 OS=Oryza sativa subsp. japonica GN=Os01g0552300 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 2.527e-16
Identity = 29/51 (56.86%), Postives = 33/51 (64.71%), Query Frame = 3
Query:    3 WDYMNSSDAVKFVRNQLXQHGDVQLACEXXXXXXXXXXXXXNISIVIADXG 155
            WDY+ SS+AV  VR+QL QHGDVQ+ACE             NISIVIAD G
Sbjct:  298 WDYIKSSEAVALVRDQLRQHGDVQVACEALGQIALDRRSQDNISIVIADLG 348          

HSP 2 Score: 46.595 bits (109), Expect = 2.527e-16
Identity = 23/42 (54.76%), Postives = 31/42 (73.81%), Query Frame = 1
Query:  241 ILDVSRQTDWRNLPLQQQNVVYELAQAFATIGIVSLGIWMSS 366
            I D+ R T+W+ LP Q+ N+  EL QA AT+G VSLGI++SS
Sbjct:  344 IADLGR-TNWKELPAQRPNLFLELTQAVATVGAVSLGIYISS 384          
The following BLAST results are available for this feature:
BLAST of GO241445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
P2C57_ARATH1.624e-1954.90Protein phosphatase 2C 57 OS=Arabidopsis thaliana ... [more]
P2C05_ORYSJ2.527e-1656.86Probable protein phosphatase 2C 5 OS=Oryza sativa ... [more]
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Properties
Property NameValue
Genbank description93 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 177 5, mRNA sequence.