GO241432

Overview
NameGO241432
Unique NameGO241432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2814 contig Csv1_Contig2814:637..1322. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_XENLA (2-oxoglutarate dehydrogenase, mitochondrial OS=Xenopus laevis GN=ogdh PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.271e-28
Identity = 63/145 (43.45%), Postives = 87/145 (60.00%), Query Frame = 1
Query:   22 FKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSAS-DVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            F+R+I +    S   EG++RL+ C GKVYYEL + R  R    DVAI RVEQL PFP+DLV++E+++YPNA++VWCQEE  N G Y Y+ PRL   +        + + Y GR P AA ATG  + H+ E    +  +   +  K
Sbjct:  879 FQRIIPEAGPASQNPEGVKRLIFCTGKVYYELTKERSGRDMEGDVAIARVEQLSPFPFDLVEKEVQKYPNADLVWCQEEHKNQGYYDYVKPRLRTTIHRT-----KPVWYAGRDPAAAPATGNKKTHLTELRRFLDTAFNLDAFK 1018          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_CAEBR (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis briggsae GN=CBG01737 PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.795e-26
Identity = 60/140 (42.86%), Postives = 85/140 (60.71%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXK-RSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQK 429
            G  F+R+I +    S     ++RLV C GKVYY++   R      +DVA+ RVEQL PFPYDLVQ+E ++Y  AEI+W QEE  NMG ++++ PR+   +    R T    KY GR P ++ ATG    H++EQ E++ K
Sbjct:  878 GSNFQRIIPETGAPSQNPPNVQRLVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKYQGAEIIWAQEEHKNMGAWSFVQPRINSLLSIDGRAT----KYAGRLPSSSPATGNKYTHMQEQKEMMSK 1013          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_MACFA (2-oxoglutarate dehydrogenase, mitochondrial OS=Macaca fascicularis GN=OGDH PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRS-ASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +   E ++RL+ C GKVYY+L   R  R     VAI R+EQL PFP+DL+ +E+++YPNAE+ WCQEE  N G Y Y+ PRL   +        + + Y GR P AA ATG  + H+ E   L+  +   +  K
Sbjct:  878 GTHFQRVIPEDGPAAQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNAELAWCQEEHKNQGYYDYVKPRLRTTISRA-----KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDVFK 1020          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_HUMAN (2-oxoglutarate dehydrogenase, mitochondrial OS=Homo sapiens GN=OGDH PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 6.821e-26
Identity = 59/148 (39.86%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRS-ASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +   E ++RL+ C GKVYY+L   R  R     VAI R+EQL PFP+DL+ +E+++YPNAE+ WCQEE  N G Y Y+ PRL   +        + + Y GR P AA ATG  + H+ E   L+  +   +  K
Sbjct:  878 GTHFQRVIPEDGPAAQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPNAELAWCQEEHKNQGYYDYVKPRLRTTISRA-----KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDVFK 1020          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_RAT (2-oxoglutarate dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Ogdh PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.908e-26
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRS-ASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +   + ++RL+ C GKVYY+L   R  R  A +VAI R+EQL PFP+DL+ +E ++YPNAE+ WCQEE  N G Y Y+ PRL      +DR   + + Y GR P AA ATG  + H+ E    +  +   +  K
Sbjct:  878 GTHFQRVIPEDGPAAQNPDKVKRLLFCTGKVYYDLTRERKARDMAEEVAITRIEQLSPFPFDLLLKEAQKYPNAELAWCQEEHKNQGYYDYVKPRL---RTTIDRA--KPVWYAGRDPAAAPATGNKKTHLTELQRFLDTAFDLDAFK 1020          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_CAEEL (2-oxoglutarate dehydrogenase, mitochondrial OS=Caenorhabditis elegans GN=T22B11.5 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXK-RSASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQK 429
            G  F+R+I +    S     ++R+V C GKVYY++   R      +DVA+ RVEQL PFPYDLVQ+E ++Y  AEI+W QEE  NMG ++++ PR+   +    R T    KY GR P ++ ATG    H++EQ E++ K
Sbjct:  880 GSNFQRVIPETGAPSQNPPDVKRVVFCTGKVYYDMVAARKHVGKENDVALVRVEQLSPFPYDLVQQECRKYQGAEILWAQEEHKNMGAWSFVQPRINSLLSIDGRAT----KYAGRLPSSSPATGNKFTHMQEQKEMMSK 1015          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: OGDHL_PONAB (2-oxoglutarate dehydrogenase-like, mitochondrial OS=Pongo abelii GN=OGDHL PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.985e-25
Identity = 58/131 (44.27%), Postives = 80/131 (61.07%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHV 402
            G  F+R+I +    +   E +RRL+ C GKVYY+L + R  +   + VAI R+EQ+ PFP+DL+++E ++YP AE+ WCQEE  NMG Y YISPR    ++         I YVGR P AA ATG    H+
Sbjct:  864 GTSFQRVIPEDGAAARAPEQVRRLIFCTGKVYYDLVKERSSQGLEEKVAITRLEQISPFPFDLIKQEAEKYPGAELAWCQEEHKNMGYYDYISPRFMTILRRA-----RPIWYVGRDPAAAPATGNRNTHL 989          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_PONAB (2-oxoglutarate dehydrogenase, mitochondrial OS=Pongo abelii GN=OGDH PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.385e-25
Identity = 58/148 (39.19%), Postives = 84/148 (56.76%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRS-ASDVAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +   E ++RL+ C GKVYY+L   R  R     VAI R+EQL PFP+DL+ +E+++YP+AE+ WCQEE  N G Y Y+ PRL   +        + + Y GR P AA ATG  + H+ E   L+  +   +  K
Sbjct:  878 GTHFQRVIPEDGPAAQNPENVKRLLFCTGKVYYDLTRERKARDMVGQVAITRIEQLSPFPFDLLLKEVQKYPSAELAWCQEEHKNQGYYDYVKPRLRTTISRA-----KPVWYAGRDPAAAPATGNKKTHLTELQRLLDTAFDLDIFK 1020          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: OGDHL_HUMAN (2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=2 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 5.774e-25
Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHV 402
            G  F+R+I +    +   E ++RL+ C GKVYY+L + R  +   + VAI R+EQ+ PFP+DL+++E ++YP AE+ WCQEE  NMG Y YISPR    ++         I YVGR P AA ATG    H+
Sbjct:  864 GTSFQRVIPEDGAAARAPEQVQRLIFCTGKVYYDLVKERSSQDLEEKVAITRLEQISPFPFDLIKQEAEKYPGAELAWCQEEHKNMGYYDYISPRFMTILRRA-----RPIWYVGRDPAAAPATGNRNTHL 989          
BLAST of GO241432 vs. ExPASy Swiss-Prot
Match: ODO1_MOUSE (2-oxoglutarate dehydrogenase, mitochondrial OS=Mus musculus GN=Ogdh PE=1 SV=3)

HSP 1 Score: 114.39 bits (285), Expect = 5.774e-25
Identity = 59/148 (39.86%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   13 GXRFKRLIKDQNGHSDLEEGIRRLVXCXGKVYYELDEGRXKRSASD-VAICRVEQLCPFPYDLVQRELKRYPNAEIVWCQEEPMNMGXYTYISPRLAXAMKAVDRGTIEDIKYVGRAPXAAXATGXYQAHVKEQTELVQKSIQPEPIK 453
            G  F+R+I +    +     ++RL+ C GKVYY+L   R  R+  + VAI R+EQL PFP+DL+ +E ++YPNAE+ WCQEE  N G Y Y+ PRL      +DR   + + Y GR P AA ATG  + H+ E    +  +   +  K
Sbjct:  878 GTHFQRVIPENGPAAQDPHKVKRLLFCTGKVYYDLTRERKARNMEEEVAITRIEQLSPFPFDLLLKEAQKYPNAELAWCQEEHKNQGYYDYVKPRL---RTTIDRA--KPVWYAGRDPAAAPATGNKKTHLTELQRFLDTAFDLDAFK 1020          
The following BLAST results are available for this feature:
BLAST of GO241432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
ODO1_XENLA3.271e-2843.452-oxoglutarate dehydrogenase, mitochondrial OS=Xen... [more]
ODO1_CAEBR1.795e-2642.862-oxoglutarate dehydrogenase, mitochondrial OS=Cae... [more]
ODO1_MACFA6.821e-2639.862-oxoglutarate dehydrogenase, mitochondrial OS=Mac... [more]
ODO1_HUMAN6.821e-2639.862-oxoglutarate dehydrogenase, mitochondrial OS=Hom... [more]
ODO1_RAT8.908e-2640.542-oxoglutarate dehydrogenase, mitochondrial OS=Rat... [more]
ODO1_CAEEL1.519e-2542.142-oxoglutarate dehydrogenase, mitochondrial OS=Cae... [more]
OGDHL_PONAB1.985e-2544.272-oxoglutarate dehydrogenase-like, mitochondrial O... [more]
ODO1_PONAB3.385e-2539.192-oxoglutarate dehydrogenase, mitochondrial OS=Pon... [more]
OGDHL_HUMAN5.774e-2543.512-oxoglutarate dehydrogenase-like, mitochondrial O... [more]
ODO1_MOUSE5.774e-2539.862-oxoglutarate dehydrogenase, mitochondrial OS=Mus... [more]

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Properties
Property NameValue
Genbank description80 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 164 5, mRNA sequence.