GO241394

Overview
NameGO241394
Unique NameGO241394
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1
Libraries
Library NameType
Cara cara navel orange fruit cDNA librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10456 contig Csv1_Contig10456:417..1139. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of GO241394 vs. ExPASy Swiss-Prot
Match: GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens GN=IFI30 PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.933e-14
Identity = 49/131 (37.40%), Postives = 66/131 (50.38%), Query Frame = 2 
Query:    2 QHGXSECLLNTVEACAIDSWPEXNKHFPXIYCIESLVYEHKYSQWETCFDKLE--LDPKPIVDCYTSGYGTQLELKYAAETNSLVPPHQYVPWVIVEGQPLYEDYENFISYVCKAYKG---NVVPKACSNL 379
            QHG  EC  N VEAC +D   +    F  I C+E   +E        C       L P  I++C     G QL    A  T++L PPH+YVPWV V G+PL ED    ++ VC+ Y+G   +V P + S+L
Sbjct:  129 QHGEEECKFNKVEACVLDEL-DMELAFLTIVCMEE--FEDMERSLPLCLQLYAPGLSPDTIMECAMGDRGMQLMHANAQRTDALQPPHEYVPWVTVNGKPL-EDQTQLLTLVCQLYQGKKPDVCPSSTSSL 255
The following BLAST results are available for this feature:
BLAST of GO241394 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GILT_HUMAN2.933e-1437.40Gamma-interferon-inducible lysosomal thiol reducta... [more]
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Properties
Property NameValue
Genbank description42 Cara cara navel orange fruit cDNA library Citrus sinensis cDNA clone 124 5, mRNA sequence.