EY690635

Overview
NameEY690635
Unique NameEY690635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length521
Libraries
Library NameType
Sweet orange bark, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9130 contig Csv1_Contig9130:1..521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY690635 vs. ExPASy Swiss-Prot
Match: GDL76_ARATH (GDSL esterase/lipase At5g14450 OS=Arabidopsis thaliana GN=At5g14450 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.583e-30
Identity = 52/78 (66.67%), Postives = 64/78 (82.05%), Query Frame = 2
Query:    2 PFKVCCGYHENYHHVWCGNKATINKTEVYGASCEDPSKSISWDGVHYTQAANQWVANHTLYGSLTDPPIPITQACHRQ 235
            P KVCCGYHE Y H+WCGNK  +N TE+YG SC +P  ++SWDGVHYT+AAN+ VA+ TL G LTDPP+PIT+AC+RQ
Sbjct:  312 PLKVCCGYHEKYDHIWCGNKGKVNNTEIYGGSCPNPVMAVSWDGVHYTEAANKHVADRTLNGLLTDPPVPITRACYRQ 389          
BLAST of EY690635 vs. ExPASy Swiss-Prot
Match: GDL54_ARATH (GDSL esterase/lipase At3g27950 OS=Arabidopsis thaliana GN=At3g27950 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.682e-13
Identity = 34/75 (45.33%), Postives = 46/75 (61.33%), Query Frame = 2
Query:    2 PFKVCCGYHENYHHVWCGNKATINKTEVYGASCEDPSKSISWDGVHYTQAANQWVANHTLYGSLTDPPIPITQAC 226
            PF  CC        + CG    +N TE+Y +SC++    ISWDG+HYT+ AN  VAN  L GS++DPP+P  +AC
Sbjct:  293 PFDYCC-VGAIGRGMGCGKTIFLNGTELYSSSCQNRKNFISWDGIHYTETANMLVANRILDGSISDPPLPTQKAC 366          
BLAST of EY690635 vs. ExPASy Swiss-Prot
Match: EST_HEVBR (Esterase OS=Hevea brasiliensis PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 4.143e-12
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 2
Query:    2 PFKVCCGYHENYHH---VWCGNKATINK-TEVYGASCEDPSKSISWDGVHYTQAANQWVANHTLYGSLTDPPIPITQACHR 232
            P   CCGY   Y+      CG+  T +  T++   SC  PS  ++WDG HYT+AAN++  +    G+ +DPP+P+  ACH+
Sbjct:  301 PLITCCGYGGKYNFSVTAPCGDTVTADDGTKIVVGSCACPSVRVNWDGAHYTEAANEYFFDQISTGAFSDPPVPLNMACHK 381          
BLAST of EY690635 vs. ExPASy Swiss-Prot
Match: GDL53_ARATH (GDSL esterase/lipase At3g26430 OS=Arabidopsis thaliana GN=At3g26430 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.574e-11
Identity = 31/81 (38.27%), Postives = 44/81 (54.32%), Query Frame = 2
Query:    2 PFKVCCGYHENYHH---VWCGNKATINKTEVYGA-SCEDPSKSISWDGVHYTQAANQWVANHTLYGSLTDPPIPITQACHR 232
            P   CCG+   Y+    + CG K  I   E+  A SC D S  +SWDG+H+T+  N W+      G+ +DPP+P+  AC R
Sbjct:  300 PLVACCGHGGKYNFNKLIKCGAKVMIKGKEIVLAKSCNDVSFRVSWDGIHFTETTNSWIFQQINDGAFSDPPLPVKSACTR 380          
The following BLAST results are available for this feature:
BLAST of EY690635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
GDL76_ARATH2.583e-3066.67GDSL esterase/lipase At5g14450 OS=Arabidopsis thal... [more]
GDL54_ARATH1.682e-1345.33GDSL esterase/lipase At3g27950 OS=Arabidopsis thal... [more]
EST_HEVBR4.143e-1238.27Esterase OS=Hevea brasiliensis PE=1 SV=1[more]
GDL53_ARATH1.574e-1138.27GDSL esterase/lipase At3g26430 OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C2-003-095-H08-CT.F Sweet orange bark, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY690635 ID=EY690635; Name=EY690635; organism=Citrus sinensis; type=EST; length=521bp
TCCATTTAAGGTCTGCTGTGGGTATCATGAGAACTATCACCATGTGTGGT
GTGGAAACAAGGCAACCATCAACAAAACTGAAGTGTATGGGGCTTCTTGT
GAAGACCCTTCAAAATCTATTAGCTGGGATGGTGTACACTATACGCAGGC
TGCGAATCAGTGGGTTGCTAATCATACTCTTTATGGTTCACTGACAGACC
CGCCAATTCCAATCACCCAAGCGTGTCATAGGCAGTGAGGGTATTTGTCA
GTGTCATACATGGTCGATAGAGATTTTTGGGGAGGTCATAGTGAAAATTT
CAAGTATTTTTGGTACAAGAGAGCAGCAGATCAGTAAGTTTTCTCTATAT
GATTCAGGAGTATGGTTTTGTGTAATCGATCTTAAGGTTGATAATTGAAC
AACCTCAAGAATTCAATCTTTATTATGTTTAAGCCAGAACCTTTGGTGTG
TTTGCTATTTCTCTAATAATAAATTTTCAGAATACATATCTATTACCCAA
AAAAACAAAAAAAAAAAAGGG
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