DY257106

Overview
NameDY257106
Unique NameDY257106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length890
Libraries
Library NameType
AbsCFruitcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4105 contig Csv1_Contig4105:242..1131. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7B_ARATH (Proteasome subunit beta type-7-B OS=Arabidopsis thaliana GN=PBB2 PE=1 SV=2)

HSP 1 Score: 407.912 bits (1047), Expect = 3.905e-113
Identity = 198/226 (87.61%), Postives = 216/226 (95.58%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE-GGDAMEE 676
            DGVILGADTRATEGPIV DKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRVVTALTLLKKHLF+YQG+V AALVLGGVD TGPHLHTIYPHGSTDTLPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV +AICSGIFNDLGSGSNVD+CVITKGHKEYLRN++ PNPRT+V++KGYSF KKTEVLLTKITPL ERVE+VE  G+AMEE
Sbjct:   49 DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVVTALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKITPLLERVEIVEVAGEAMEE 274          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7A_ARATH (Proteasome subunit beta type-7-A OS=Arabidopsis thaliana GN=PBB1 PE=1 SV=2)

HSP 1 Score: 405.601 bits (1041), Expect = 1.938e-112
Identity = 194/225 (86.22%), Postives = 215/225 (95.56%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVEGGDAMEE 676
            DGVILGADTRATEGPIV DKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQL+LHRY TGR+SRV+TALTLLKKHLF+YQG+V AALVLGGVD TGPHLHTIYPHGSTDTLPFATMGSGSLAAM++FE+KYKEGLT+DEGI+LV ++ICSGIFNDLGSGSNVD+CVITKG+KEYLRN++ PNPRT+V++KGYSF KKTEVLLTKITPL ERVE+ E G+AMEE
Sbjct:   49 DGVILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLRLHRYQTGRDSRVITALTLLKKHLFSYQGHVSAALVLGGVDITGPHLHTIYPHGSTDTLPFATMGSGSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNYMEPNPRTYVSSKGYSFTKKTEVLLTKITPLLERVEITEVGEAMEE 273          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_DICDI (Proteasome subunit beta type-7 OS=Dictyostelium discoideum GN=psmB7 PE=3 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.604e-74
Identity = 138/215 (64.19%), Postives = 165/215 (76.74%), Query Frame = 2
Query:    5 GVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEV 649
            GV+LGADTRATEGPIV DKNCEKIHY+A NIYCCGAGTAADTE+ T ++SS+L+LH+  TG+++RV+TALT+LK+ LF YQG++ AAL+LGG+D  GP LHTIYPHGSTD LP+ TMGSGSLAAMA+FE+KYK  +TK+E I LV +AI SGIFNDLGSGSNVDV VI       LRN+  PN R F N         T VL   I PL  +V +
Sbjct:   45 GVVLGADTRATEGPIVADKNCEKIHYIADNIYCCGAGTAADTESATALISSKLKLHKLSTGKQTRVITALTMLKQMLFKYQGHISAALILGGIDINGPSLHTIYPHGSTDQLPYVTMGSGSLAAMAVFEAKYKNDMTKEEAIALVAEAISSGIFNDLGSGSNVDVTVIEPSGVTVLRNYQTPNERKFRNNPYIFKQGTTPVLKQDIAPLSTKVVI 259          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_HUMAN (Proteasome subunit beta type-7 OS=Homo sapiens GN=PSMB7 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 4.088e-70
Identity = 130/218 (59.63%), Postives = 165/218 (75.69%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 655
            DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+  T ++SS L+LH   TGR  RVVTA  +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++  + ++E   LV +AI +GIFNDLGSGSN+D+CVI+K   ++LR + +PN +     +       T VL  KITPL   +EV+E
Sbjct:   53 DGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPL--EIEVLE 268          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_RAT (Proteasome subunit beta type-7 OS=Rattus norvegicus GN=Psmb7 PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.189e-69
Identity = 129/218 (59.17%), Postives = 166/218 (76.15%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 655
            DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+  T ++SS L+LH   TGR  RVVTA  +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++  + ++E  +LV +AI +GIFNDLGSGSN+D+CVI+K   ++LR + +PN +     +       T VL  K+TPL   +EV+E
Sbjct:   53 DGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTPL--ELEVLE 268          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_MOUSE (Proteasome subunit beta type-7 OS=Mus musculus GN=Psmb7 PE=1 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.553e-69
Identity = 129/218 (59.17%), Postives = 165/218 (75.69%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 655
            DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+  T ++SS L+LH   TGR  RVVTA  +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++  + ++E  +LV +AI +GIFNDLGSGSN+D+CVI+K   ++LR   +PN +     +       T VL  K+TPL   +EV+E
Sbjct:   53 DGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLTTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPFSVPNKKGTRLGRYRCEKGTTAVLTEKVTPL--EIEVLE 268          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_PIG (Proteasome subunit beta type-7 OS=Sus scrofa GN=PSMB7 PE=2 SV=2)

HSP 1 Score: 261.922 bits (668), Expect = 3.461e-69
Identity = 129/218 (59.17%), Postives = 165/218 (75.69%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLTKITPLRERVEVVE 655
            DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+  T ++SS L+LH   TGR  RVVTA  +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++  + ++E  QLV +AI +GIFNDLGSGSN+D+CVI+K   ++LR + +PN +     +       T VL  K+T L   +EV+E
Sbjct:   53 DGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPEMEEEEAKQLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKGTRFGRYRCEKGTTAVLTEKVTAL--DIEVLE 268          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_BOVIN (Proteasome subunit beta type-7 OS=Bos taurus GN=PSMB7 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.520e-69
Identity = 130/219 (59.36%), Postives = 167/219 (76.26%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLLT-KITPLRERVEVVE 655
            DG++LGADTRATEG +V DKNC KIH+++PNIYCCGAGTAADT+  T ++SS L+LH   TGR  RVVTA  +LK+ LF YQGY+ AALVLGGVD TGPHL++IYPHGSTD LP+ TMGSGSLAAMA+FE K++  + ++E  +LV +AI +GIFNDLGSGSN+D+CVI+K   ++LR + +PN +       Y   K T  +LT K+T L   +EV+E
Sbjct:   53 DGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLISSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHGSTDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPYSVPNKKG-TRFGRYRCEKGTNAVLTEKVTTL--EIEVLE 268          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.352e-62
Identity = 118/205 (57.56%), Postives = 155/205 (75.61%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKG-HKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 613
            +GV++ ADTR+T+GPIV DKNC K+H ++P I+C GAGTAADTEAVT ++ S ++LH  +T RE RVV+AL +LK+HLF YQG++ A L++ GVD TG HL +I+ HGSTD   + ++GSGSLAAMA+ ES +K+ LTK+E I+L  DAI +GI+NDLGSGSNVDVCV+  G   EYLRN+L PN R     K Y FP+ T  +L
Sbjct:   39 NGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRNYLTPNVRE-EKQKSYKFPRGTTAVL 242          
BLAST of DY257106 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.937e-60
Identity = 113/204 (55.39%), Postives = 151/204 (74.02%), Query Frame = 2
Query:    2 DGVILGADTRATEGPIVCDKNCEKIHYMAPNIYCCGAGTAADTEAVTDMVSSQLQLHRYHTGRESRVVTALTLLKKHLFNYQGYVQAALVLGGVDCTGPHLHTIYPHGSTDTLPFATMGSGSLAAMAMFESKYKEGLTKDEGIQLVVDAICSGIFNDLGSGSNVDVCVITKGHKEYLRNHLLPNPRTFVNAKGYSFPKKTEVLL 613
            D ++LGADTRAT GPI+ DKNC+K+H ++PNI+C GAGTAADTE VT M+SS ++LH  +T R+ RVVTALT+LK+HLF YQG++ A LVLGG DC GPHL TI  HGS+D LP+  +GSGSLAA+++ E+KY+  L + E ++LV +AI +GIFNDLGSGSN D+ VI +      R +  PN R    +K Y++ + T  +L
Sbjct:   45 DCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYDCKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGYSKPNERATKQSK-YTYDRGTTAVL 247          
The following BLAST results are available for this feature:
BLAST of DY257106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 52
Match NameE-valueIdentityDescription
PSB7B_ARATH3.905e-11387.61Proteasome subunit beta type-7-B OS=Arabidopsis th... [more]
PSB7A_ARATH1.938e-11286.22Proteasome subunit beta type-7-A OS=Arabidopsis th... [more]
PSB7_DICDI1.604e-7464.19Proteasome subunit beta type-7 OS=Dictyostelium di... [more]
PSB7_HUMAN4.088e-7059.63Proteasome subunit beta type-7 OS=Homo sapiens GN=... [more]
PSB7_RAT1.189e-6959.17Proteasome subunit beta type-7 OS=Rattus norvegicu... [more]
PSB7_MOUSE1.553e-6959.17Proteasome subunit beta type-7 OS=Mus musculus GN=... [more]
PSB7_PIG3.461e-6959.17Proteasome subunit beta type-7 OS=Sus scrofa GN=PS... [more]
PSB7_BOVIN4.520e-6959.36Proteasome subunit beta type-7 OS=Bos taurus GN=PS... [more]
PSB7_YEAST5.352e-6257.56Proteasome component PUP1 OS=Saccharomyces cerevis... [more]
PSB7_SCHPO2.937e-6055.39Probable proteasome subunit beta type-7 OS=Schizos... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAK1AB10FM2 AbsCFruit Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY257106 ID=DY257106; Name=DY257106; organism=Citrus sinensis; type=EST; length=890bp
GGATGGCGTCATTCTTGGGGCAGATACCAGAGCAACTGAAGGACCCATAG
TTTGCGATAAGAATTGTGAGAAAATTCATTACATGGCTCCAAACATATAT
TGTTGTGGTGCAGGAACTGCTGCTGACACAGAGGCTGTAACTGACATGGT
CAGCTCACAGCTGCAGTTACATCGTTATCATACTGGTAGAGAGTCAAGGG
TTGTTACAGCACTGACTCTTCTCAAGAAGCACCTTTTCAACTACCAAGGT
TATGTGCAAGCTGCTTTGGTTCTTGGTGGAGTTGATTGCACTGGACCTCA
TCTTCACACAATATATCCACATGGTTCAACTGACACTTTACCATTTGCGA
CAATGGGTTCTGGTTCTCTTGCTGCCATGGCTATGTTTGAATCAAAATAC
AAAGAAGGCCTGACTAAAGATGAGGGAATACAGCTAGTTGTGGACGCCAT
TTGCTCTGGTATATTCAATGACTTGGGAAGTGGAAGCAATGTTGATGTCT
GTGTAATTACCAAGGGGCACAAAGAGTACCTGAGGAACCACCTTTTGCCA
AATCCTCGCACCTTTGTCAATGCCAAAGGCTATTCTTTCCCTAAGAAGAC
AGAGGTCCTCTTGACGAAGATCACCCCGCTGAGGGAAAGGGTGGAAGTGG
TTGAGGGAGGAGATGCAATGGAAGAGTGAAAGATCAGAAGAGCACAAGGC
TGAAATCAGAGTATAGTTTACAATTCCTGGTTTAGAAACTGGAATGATAT
TTTTTAAAATTTTACATTTTCCGGAATTGGGTTCGCACATGACTACTTGT
GGATTATGTTATTTAGCTTTGTGTTCAGTTGATGGTTGTGTTGATGGAAT
TCATTTTGGCGGTTCATTAAGAACTAGCGTTGTCTTGCAT
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