DT214598

Overview
NameDT214598
Unique NameDT214598
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10597 contig Csv1_Contig10597:136..1024. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR3_ARATH (Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=2 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 6.957e-78
Identity = 140/219 (63.93%), Postives = 162/219 (73.97%), Query Frame = -1
Query:  260 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQXXXXXXXXXXXXXXXPN--------TGKTXXXXXXXXXXXXXXXICLLFARNLV-KKHDDY 889
            QCRGDLSN DCYNCVS+LP LSDK CGKTI++RVQL GCY+LYEVSGF Q+SG+EMLFKTCG  N+AG+GFEERRD A   M+NGVVSGHGFY T+Y+SVY+L QCEGD+GD+DC  CVK A+++AQVECGSSISGQ+YLHKCFI+YSYYPNGVPRR                 +        TGKT               ICLLFA+NL+ KKHDDY
Sbjct:   89 QCRGDLSNHDCYNCVSRLPVLSDKLCGKTIASRVQLSGCYLLYEVSGFSQISGMEMLFKTCGKNNIAGTGFEERRDTAFGVMQNGVVSGHGFYATTYESVYVLGQCEGDVGDTDCSGCVKNALEKAQVECGSSISGQIYLHKCFIAYSYYPNGVPRRSSSSSSSSSSSSSGSSNSDPSTSTGATGKTVAIIVGGAAGVGFLVICLLFAKNLMRKKHDDY 307          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR11_ARATH (Cysteine-rich repeat secretory protein 11 OS=Arabidopsis thaliana GN=CRRSP11 PE=2 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 6.512e-76
Identity = 134/214 (62.62%), Postives = 159/214 (74.30%), Query Frame = -1
Query:  260 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQXXXXXXXXXXXXXXXPN---TGKTXXXXXXXXXXXXXXXICLLFARNLV-KKHDDY 889
            QCRGDLSN+DCYNCVS+LP LS K CGKTI+ARVQL GCY+LYE+SGF Q+SG+E+LFKTCG  NVAG+GFE+RRD A   M+NGVV GHGFY T+Y+SVY+L QCEGD+GDSDC  C+K A+QRAQVECGSSISGQ+YLHKCF+ YS+YPNGVP+R                 +   TGKT               ICLLF +NL+ KK+DDY
Sbjct:   91 QCRGDLSNNDCYNCVSRLPVLSGKLCGKTIAARVQLSGCYLLYEISGFAQISGMELLFKTCGKNNVAGTGFEQRRDTAFGVMQNGVVQGHGFYATTYESVYVLGQCEGDIGDSDCSGCIKNALQRAQVECGSSISGQIYLHKCFVGYSFYPNGVPKRSSPYPSSGSSGSSSSSSSSGTTGKTVAIIVGGTAGVGFLVICLLFVKNLMKKKYDDY 304          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR56_ARATH (Cysteine-rich repeat secretory protein 56 OS=Arabidopsis thaliana GN=CRRSP56 PE=1 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.863e-47
Identity = 91/169 (53.85%), Postives = 111/169 (65.68%), Query Frame = -1
Query:  425 QCRGDLSNSDCYNCVSKLPTLSDKQCG------KTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGH--------GFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVP 889
            QCRGDL N+ CY+CVSK+P L  K CG        ++ARV L GCY+ YE SGF Q SG EMLF+ CG  +    GF  +R+ A    ENGV +G         GFY   Y+SVY+L QCEG LG+SDCG+CVK   ++A+ ECG S SGQVYL KCF+SYSYY +GVP
Sbjct:   83 QCRGDLQNAQCYDCVSKIPKLVSKLCGGGRDDGNVVAARVHLAGCYIRYESSGFRQTSGTEMLFRVCGKKDSNDPGFVGKRETAFGMAENGVKTGSSGGGGGGGGFYAGQYESVYVLGQCEGSLGNSDCGECVKDGFEKAKSECGESNSGQVYLQKCFVSYSYYSHGVP 251          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR39_ARATH (Cysteine-rich repeat secretory protein 39 OS=Arabidopsis thaliana GN=CRRSP39 PE=2 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 1.421e-30
Identity = 77/225 (34.22%), Postives = 111/225 (49.33%), Query Frame = -1
Query:  263 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLY----------EVSGFPQVSGLE-----MLFKTC-GSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYSYYPNGVPRRQXXXXXXXXXXXXXXXPNTGKTXXXXXXXXXXXXXXXICLLFARNLVKKHDD 889
            QCR D  +  C+ CV  L  +S + CG   SAR+ L GC+++Y          +V+   +    E     ++ K C G+T     GFEE R  AL A E GVV GHGFY  SY+ ++++AQC+G +   DCG+C+  A   A  EC  SI+GQ+YL  C + Y+Y+P+ +P                   NTGK+               I  +F ++L KK DD
Sbjct:  102 QCREDYPSEICHKCVGDLREISSRSCGNATSARIHLRGCHLIYKFERIDTPGAQVNNHHKYKLFETPEHGLIHKICDGATAETFPGFEEMRTEALTAAETGVVDGHGFYEDSYKLLHVVAQCDGHVEACDCGECISSAAAAAAEECRWSIAGQIYLEGCHVGYTYHPHELPN--------DSYHEEGSKVNTGKSLAIVVGGVAALVFVAIFFMFLKSLRKKGDD 318          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR60_ARATH (Cysteine-rich repeat secretory protein 60 OS=Arabidopsis thaliana GN=CRRSP60 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.926e-19
Identity = 53/148 (35.81%), Postives = 76/148 (51.35%), Query Frame = -1
Query:  446 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 889
            QCRGDLS  DC  CV++  +     C  T    +QL GCY+ Y+   F       ++ K CGS+    +    RRDA L  + NG   G  F       V  + QC GDL  S+C DC+  A+ R + +CG+++ G ++L KC+  YS
Sbjct:   92 QCRGDLSMPDCATCVARAVSQVGPLCPFTCGGALQLAGCYIKYDNISFLGQEDKTVVLKKCGSSEGYNTDGISRRDAVLTELVNG---GGYFRAGGSGDVQGMGQCVGDLTVSECQDCLGTAIGRLKNDCGTAVFGDMFLAKCYARYS 236          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR12_ARATH (Cysteine-rich repeat secretory protein 12 OS=Arabidopsis thaliana GN=CRRSP12 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.399e-16
Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = -1
Query:  446 QCRGDLSNS--DCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 889
            QCRGDLS+   DC  CV++  +     C       +QL GC++ Y+ + F  V    ++ + CG      S    RRD+ + ++     SG  +       +  +AQC GDL  ++C DC+  A+ R + +CG +  G VYL KC+  YS
Sbjct:   83 QCRGDLSSGSGDCARCVARAVSRLGSLCAMASGGALQLEGCFVKYDNTTFLGVEDKTVVVRRCGPPVGYNSDEMTRRDSVVGSL--AASSGGSYRVGVSGELQGVAQCTGDLSATECQDCLMEAIGRLRTDCGGAAWGDVYLAKCYARYS 230          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR15_ARATH (Cysteine-rich repeat secretory protein 15 OS=Arabidopsis thaliana GN=CRRSP15 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.439e-16
Identity = 49/148 (33.11%), Postives = 75/148 (50.68%), Query Frame = -1
Query:  449 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGS-GFEERRDAALQAMENGVVSGHGFYTTSYQSVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISY 889
            QCR DL +SDC  C+          C  +  A +QL GC++ YE + F       + +K C S +V     F +RRD  L  +E+  +   G+  +    V   AQC GDL  SDC  C+  +V + +  CGS+++ +VYL +C+  Y
Sbjct:   88 QCRDDLRSSDCSKCIQTSVDQITLICPYSYGASLQLEGCFLRYETNDFLGKPDTSLRYKKCSSKSVENDYDFFKRRDDVLSDLESTQL---GYKVSRSGLVEGYAQCVGDLSPSDCTACLAESVGKLKNLCGSAVAAEVYLAQCYARY 232          
BLAST of DT214598 vs. ExPASy Swiss-Prot
Match: CRR2_ARATH (Cysteine-rich repeat secretory protein 2 OS=Arabidopsis thaliana GN=CRRSP2 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 1.093e-14
Identity = 48/151 (31.79%), Postives = 70/151 (46.36%), Query Frame = -1
Query:  446 QCRGDLSNSDCYNCVSKLPTLSDKQCGKTISARVQLLGCYMLYEVSGFPQVSGLEMLFKTCGSTNVAGSGFEERRDAALQAME--NGVVSGHGFYTTSYQ-SVYLLAQCEGDLGDSDCGDCVKGAVQRAQVECGSSISGQVYLHKCFISYS 889
            QCRGDL  + C  CVS         C  + S  +Q+  C + Y+   F  V    ++   CG            +DA  +A +    + +G G Y T    +V  +AQC GDL  S C DC+  A+ R + +CG +  G VYL KC+  +S
Sbjct:   88 QCRGDLDPTACSTCVSSAVAQVGALCSNSYSGFLQMENCLIRYDNKSFLGVQDKTLILNKCGQPMEFND-----QDALTKASDVIGSLGTGDGSYRTGGNGNVQGVAQCSGDLSTSQCQDCLSDAIGRLKSDCGMAQGGYVYLSKCYARFS 233          
The following BLAST results are available for this feature:
BLAST of DT214598 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
CRR3_ARATH6.957e-7863.93Cysteine-rich repeat secretory protein 3 OS=Arabid... [more]
CRR11_ARATH6.512e-7662.62Cysteine-rich repeat secretory protein 11 OS=Arabi... [more]
CRR56_ARATH4.863e-4753.85Cysteine-rich repeat secretory protein 56 OS=Arabi... [more]
CRR39_ARATH1.421e-3034.22Cysteine-rich repeat secretory protein 39 OS=Arabi... [more]
CRR60_ARATH1.926e-1935.81Cysteine-rich repeat secretory protein 60 OS=Arabi... [more]
CRR12_ARATH3.399e-1632.00Cysteine-rich repeat secretory protein 12 OS=Arabi... [more]
CRR15_ARATH4.439e-1633.11Cysteine-rich repeat secretory protein 15 OS=Arabi... [more]
CRR2_ARATH1.093e-1431.79Cysteine-rich repeat secretory protein 2 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_06G03_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0006a_D02_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214598 ID=DT214598; Name=DT214598; organism=Citrus sinensis; type=EST; length=889bp
TTCATTTCATTTCCATCCTCTTTTCACTTTGTGAAAATTTGTAATGTAAT
TTACTTCTCATTCCCAACAAAAATCTTGACCAGCTGTAACATCAAAACCC
CACATTTACTCTCCCTTTCATTCACCGACTCTCCTATTCATTAGTCATTA
CAAAACCCAATTCTAAAGAAGAAACAAATTGTTGGATTGAAAAAAAATAT
TTATATCCACCTCGAAAAAGTACACTACCTCTCTAGAATCCACTGCCTGG
TCTCTCTCAATAATCATCATGTTTCTTCACCAAATTTCTTGCAAACAACA
AGCAAATAACTACAAATCCAACTCCTGCTGCTCCTCCTAGAATTATGGCC
ACTGTTTTTCCTGTATTTGGTCCTGGTCCTGATGAATCTGGAGAAGACGA
TGAAGAAGATGATGACTGTCTCCTTGGGACCCCATTTGGATAATAACTAT
AACTAATAAAGCACTTGTGGAGATAAACTTGGCCGGAAATAGAGCTTCCA
CATTCAACCTGAGCTCTTTGAACAGCACCCTTAACACAATCACCACAATC
CGAATCACCCAAATCACCCTCACATTGAGCCAACAGGTAGACAGATTGAT
AGCTTGTTGTGTAGAAACCATGGCCACTGACCACACCATTTTCCATCGCT
TGAAGTGCAGCATCCCTCCTCTCTTCAAACCCACTACCAGCCACATTAGT
GGACCCACAAGTCTTGAACAGCATCTCCAAGCCCGAAACTTGAGGAAAGC
CTGAAACTTCATACAACATGTAGCAACCAAGTAGCTGAACTCTAGCAGAG
ATGGTCTTGCCACACTGTTTGTCTGATAAAGTCGGCAACTTGCTCACACA
GTTGTAGCAATCACTGTTGCTAAGGTCTCCTCTGCATTG
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