DT214594

Overview
NameDT214594
Unique NameDT214594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13363 contig Csv1_Contig13363:172..1026. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214594 vs. ExPASy Swiss-Prot
Match: IQD32_ARATH (Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 9.875e-34
Identity = 89/172 (51.74%), Postives = 113/172 (65.70%), Query Frame = -1
Query:  346 ITVPESQGTPSSQVS--VKAKNNRSDKSGSYRKRKPLSASKGSPSNPSQNSGARSSTEQLPKNQKNGKRRSSFGSSRTDNIDQEPGDNSSS-SSLPHFMQATESARAKIQANNSPRSSPDVQDRDTY-IKKRHSLP-VANGRHGSPRIQRSLSQAQQGAKGNGALHEKKWQR 846
            +T+ ESQ TP+SQ S  VKA+  +S+KSGS +KRK    SK   S+P Q  G   +TEQ    ++   RR+SFG       DQE  ++S   +SLP FMQ T+SA+AK+Q +NSPRSSPD+Q+RD    KKRHSLP V NG+  SPRIQRS SQAQQG K      ++KWQR
Sbjct:  638 MTITESQATPASQASSSVKARKGKSEKSGSSQKRK---VSKKITSSPKQEIGTGEATEQEEGKEQKSGRRTSFG------YDQEARESSGGKNSLPRFMQPTQSAKAKVQEHNSPRSSPDLQERDVVSAKKRHSLPGVTNGKQVSPRIQRSASQAQQGTK------DRKWQR 794          
The following BLAST results are available for this feature:
BLAST of DT214594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IQD32_ARATH9.875e-3451.74Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_04J15_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0004c_E08_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214594 ID=DT214594; Name=DT214594; organism=Citrus sinensis; type=EST; length=855bp
CCAGAGGAAGCTTGCTAATGTGTCAAACTTTCAGACCAACATACCAAAAC
ATTTGTTACAAGCCCCATATAATAATCACACGACACTCTTGAACAAACAG
ACAAGCATATTCCCAGCTGCCGAAAGTTCGAAAAATATACTAAAAATTAT
TGAGTTGGCTAATAGTAATATACATCAAAACCTTACTCCAGCTCTCTGCA
TATATCAACTATAAGTACCATCAAAGTTTCGAAGAACTGAGGTTTAAAAA
TATGGACAGTGACGTCAAGTAGACCAACCGTCCCCAAGTCTGTATTTGGA
CAGGTTACTACCACGACAGACCAAGAACAATTTGTTATCCGCTCACCTCT
GCCATTTTTTCTCATGAAGAGCACCATTTCCTTTAGCACCCTGCTGTGCT
TGAGACAGAGACCGTTGAATACGTGGAGAACCATGCCTTCCATTTGCAAC
AGGTAAGGAATGCCGTTTCTTTATGTAGGTGTCTCTGTCTTGCACATCTG
GACTTGACCTCGGTGAGTTATTTGCTTGGATCTTAGCTCTTGCAGATTCT
GTGGCTTGCATGAAATGTGGTAGAGAACTGCTACTACTATTATCTCCTGG
TTCTTGATCAATGTTATCAGTTCTTGATGAACCAAAGGAACTGCGTCTCT
TGCCGTTTTTCTGATTTTTTGGCAATTGTTCTGTACTACTTCTTGCACCA
GAGTTTTGACTTGGATTTGATGGAGAACCCTTACTTGCAGAGAGGGGCTT
GCGCTTTCGGTAAGATCCACTCTTATCGGATCTGTTGTTTTTAGCTTTCA
CTGAGACCTGACTTGAAGGTGTTCCTTGGGATTCTGGAACGGTTATGTGG
CTTCT
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