DT214579

Overview
NameDT214579
Unique NameDT214579
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length924
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2243 contig Csv1_Contig2243:1414..2340. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DT214579 vs. ExPASy Swiss-Prot
Match: ZDH17_ARATH (Probable S-acyltransferase At4g15080 OS=Arabidopsis thaliana GN=At4g15080 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.723e-32
Identity = 83/166 (50.00%), Postives = 100/166 (60.24%), Query Frame = -2
Query:  429 SGFDEKIMQKGGVTDXXXXXXXXXSFLRDVKRTSVVWDQEAGRYVSVPISASDVGNR-SSLQIGLXXXXXXXXXXXXXXVIPSHESSS--SAPRAPVQQAEKLMYTGDSIFFGGPLLSVPIRDNLRNDRSL---NQERTALHLSRESRFKRDSASNQLPVFTPGGS 908
            S FDEKIMQKG   D         S LRDV+RTSVVWDQEAGRY+SVP + S+   R SS    +                P  +SSS  + P    QQ E+LMYTG+SIFFGGPL+++P RD LR+D       Q+R  L L RE+RFKRD+ SNQLPVF P G+
Sbjct:  551 STFDEKIMQKGNHADPLLLPAPAASLLRDVRRTSVVWDQEAGRYISVPATTSEPRTRFSSQNQPIPSSHMGNTQNPRPVGHPPQDSSSGRAPPPTQQQQGERLMYTGESIFFGGPLVNIPNRDGLRHDGDSGREGQDRMTLTLPREARFKRDTTSNQLPVFAPVGT 716          
BLAST of DT214579 vs. ExPASy Swiss-Prot
Match: ZDHC8_ARATH (Probable S-acyltransferase At3g22180 OS=Arabidopsis thaliana GN=At3g22180 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.652e-29
Identity = 80/183 (43.72%), Postives = 108/183 (59.02%), Query Frame = -2
Query:  396 HTSSGFDEKIMQKGGVTDXXXXXXXXXSFLRDVKRTSVVWDQEAGRYVSVPI-SASDVGNRSSLQIGLXXXXXXXXXXXXXXVIPSHESSSSAPR----APVQQAE-KLMYTGDSIFFGGPLLSVPIRDNLRNDRSL---NQERTALHLSRESRFKRDSASNQLPVFTPGGSSGHNPASGSGL 917
            H  S FD+K++ +G   D         S LRDV++TSVVWD EAGRYVS P+ + S+V NR      L              ++P+H+SSS +       P+ QAE +L YTGDSIF+GGPL+++P RD  R+ R L    Q+R A  + R++R +RDS SNQLPVF PGG  G N  +GS +
Sbjct:  529 HMHSTFDDKVLHRGNDADPLFLFAPATSHLRDVRKTSVVWDPEAGRYVSAPVTTTSEVRNRL-----LNPSSQTASTQNPRPILPAHDSSSGSSALRDPLPLHQAERRLTYTGDSIFYGGPLINIPTRDTPRSGRGLVRDVQDRLASTVHRDARIRRDSTSNQLPVFAPGG-LGANSQTGSNI 705          
The following BLAST results are available for this feature:
BLAST of DT214579 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
ZDH17_ARATH2.723e-3250.00Probable S-acyltransferase At4g15080 OS=Arabidopsi... [more]
ZDHC8_ARATH1.652e-2943.72Probable S-acyltransferase At3g22180 OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS11_01F18_f2 Parent Washington Navel Orange Red Scale-Infested Rind cDNA Library UCRCS11-2 Citrus sinensis cDNA clone CS_WEd0001d_C09_VN, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DT214579 ID=DT214579; Name=DT214579; organism=Citrus sinensis; type=EST; length=924bp
GCAATGCGATGATCTGGAACGACACTATTCAATGTTAACAGAGAAATGCA
ACAGCTACCTATCTAGAACAGTGGAATAAGAGACTTGCATTAAGAATCAT
CTGAAAAACTGCTACCATCCATGAAGCTCAGTTTCACCTAGAGAATAAAA
AGAATCTCATTTACAGACTTCTAAAGCCGACATGTCATCTCACGAAGAAC
ATTGAACTGCTTGAACCTTGCAACACAATTGTATTAGCAACGGTTTAAAA
CTGGATTAGTACTGAATGGTTCCAGGGGTCAAGCAGCTCGATAGAAGATT
TCCTCATCTTTCACTTCCTGTTAACTAATCAGCACAGACGATTTCAGGAA
AAATTTATGCACATGCTAGAAGTTTCGAGTTGAGTTTTAGGTCTACAAAC
CAGACCCAGATGCAGGATTGTGACCAGAAGAACCCCCTGGAGTGAATACA
GGAAGCTGGTTCGAGGCTGAATCCCTTTTGAATCTGGATTCTCGAGACAA
GTGGAGTGCAGTCCTCTCCTGGTTCAAACTCCTGTCATTTCTTAAATTAT
CCCTAATCGGGACACTCAAAAGTGGACCACCAAAGAAAATGGAGTCTCCT
GTGTACATCAGCTTTTCTGCTTGCTGCACTGGAGCCCTTGGTGCTGAAGA
AGAAGACTCATGTGATGGAATAACTGGCCTTCTACTTTGACTGCTAACTT
GTGCACTAGAAGATGGCAATCCTATTTGCAAGGATGATCTGTTTCCAACA
TCTGATGCTGATATTGGAACCGATACATACCTCCCAGCTTCTTGGTCCCA
AACAACAGAAGTCCTTTTAACATCTCTAAGAAAAGAAGCAGCAGGAGCTG
ACAGCAGCAATGGATCAGTTACACCTCCCTTTTGCATTATCTTTTCATCA
AATCCAGATGAAGTGTGGGTAACT
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