DT214517
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: TRAD1_HUMAN (TRAF-type zinc finger domain-containing protein 1 OS=Homo sapiens GN=TRAFD1 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.796e-15 Identity = 31/97 (31.96%), Postives = 50/97 (51.55%), Query Frame = -2 Query: 537 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 827 ++C +C + IP N +H HC RN+ C C + P+ E H H V C +C++ +E+ +L H+ CP R+ C C+ L + L EH+ Sbjct: 11 RLCDNCKKEIPVFNFTIHEIHCQRNIGMCPTCKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 23.483 bits (49), Expect = 6.796e-15 Identity = 24/120 (20.00%), Postives = 42/120 (35.00%), Query Frame = -1 Query: 148 TELCHLCNRYIRLRERYNHESRC----------TGVPENTVGSS-------------RNVRAAESDQGAHRRPAPPPPNEFYRKRFLLTIAITGIAVLLGSLFFQRKTETSQVH*QQNRG 438 TELC C R + +++ H C +P N S R + A + RRP ++ + R IT + +LF +++ + ++NRG Sbjct: 113 TELCGNCGRNVLVKDLKTHPEVCGREGEEKRNEVAIPPNAYDESWGQDGIWIASQLLRQIEALDPPMRLPRRPLRAFESDVFHNRTTNQRNITAQVSIQNNLFEEQERQ------ERNRG 226
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: TRAD1_RAT (TRAF-type zinc finger domain-containing protein 1 OS=Rattus norvegicus GN=Trafd1 PE=2 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 6.798e-15 Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = -2 Query: 537 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 827 ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H CP R+ C C+ L V L EH+ Sbjct: 11 RLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHVATEHCQVTC-KCNKKLEKRQLKQHVETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 25.7942 bits (55), Expect = 6.798e-15 Identity = 11/28 (39.29%), Postives = 15/28 (53.57%), Query Frame = -1 Query: 355 TELCHLCNRYIRLRERYNHESRCTGVPE 438 TELC C R + ++E H + C V E Sbjct: 113 TELCGSCGRNVLVKELQTHPAVCGRVEE 140
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: TRAD1_MACFA (TRAF-type zinc finger domain-containing protein 1 OS=Macaca fascicularis GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 8.830e-15 Identity = 31/97 (31.96%), Postives = 51/97 (52.58%), Query Frame = -2 Query: 537 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 827 ++C +C + IP N +H HC RN+ C +C + P+ E H H V C +C++ +E+ +L H+ CP R+ C C+ L + L EH+ Sbjct: 11 RLCDNCKKEIPVFNFTIHEIHCQRNIGMCPICKEPFPKSDMETHMAAEHCQVTC-KCNKKLEKRLLKKHEETECPLRLAVCQHCDLELSILKLKEHE 106 HSP 2 Score: 21.9422 bits (45), Expect = 8.830e-15 Identity = 8/23 (34.78%), Postives = 12/23 (52.17%), Query Frame = -1 Query: 370 TELCHLCNRYIRLRERYNHESRC 438 TELC C R + +++ H C Sbjct: 113 TELCGNCGRNVLVKDLKTHPEVC 135
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: TRAD1_MOUSE (TRAF-type zinc finger domain-containing protein 1 OS=Mus musculus GN=Trafd1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.147e-14 Identity = 32/97 (32.99%), Postives = 49/97 (50.52%), Query Frame = -2 Query: 537 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 827 ++C +C + IP N +H HC RN+ C VC + P+ + H H V C +C++ +E+ L H CP R+ C C+ L V L EH+ Sbjct: 11 RLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKSDMDIHMAAEHCQVTC-KCNKKLEKRQLKQHAETECPLRLAVCQHCDLELSVVKLKEHE 106 HSP 2 Score: 25.0238 bits (53), Expect = 1.147e-14 Identity = 11/28 (39.29%), Postives = 14/28 (50.00%), Query Frame = -1 Query: 355 TELCHLCNRYIRLRERYNHESRCTGVPE 438 TELC C R + ++E H C V E Sbjct: 113 TELCGSCGRNVLVKELKTHPEVCGRVEE 140
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: TRAD1_BOVIN (TRAF-type zinc finger domain-containing protein 1 OS=Bos taurus GN=TRAFD1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.269e-14 Identity = 31/97 (31.96%), Postives = 50/97 (51.55%), Query Frame = -2 Query: 537 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 827 ++C +C + IP N +H HC RN+ C VC + P+ E H H V C +C++ +E+ L H+ CP R+ C C+ L + L +H+ Sbjct: 11 RLCDNCKKEIPVFNFTIHEIHCQRNIGVCPVCKEPFPKCDMETHMATEHCQVTC-KCNKKLEKRQLKKHEETECPLRLALCQHCDLELSVLKLKDHE 106 HSP 2 Score: 23.8682 bits (50), Expect = 3.269e-14 Identity = 14/49 (28.57%), Postives = 21/49 (42.86%), Query Frame = -1 Query: 295 TELCHLCNRYIRLRERYNHESRC-TGVPENTVGSSRNVRAAESDQGAHR 438 TELC C R + +++ H C V E V ++ A + G R Sbjct: 113 TELCGTCGRNVLVKDLKTHPEVCGRDVEEKRVEAAMPPNAYDESWGPDR 161
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: XAF1_BOVIN (XIAP-associated factor 1 OS=Bos taurus GN=XAF1 PE=2 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 4.326e-14 Identity = 34/98 (34.69%), Postives = 52/98 (53.06%), Query Frame = -2 Query: 540 KICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFP--LPAVDLAEH 827 ++C +C R + S+++ LH AHC L C C + V + EEH H V C+ C +++ + L H+ + C +R V C FC+ L VDL EH Sbjct: 6 QVCRNCKRRVASNHLGLHEAHCLMYLVLCPECKEPVLQHEMEEHCQGGHQQVGCAMCQQSVPKHSLDSHEAQECQERPVECQFCQLAVRLNKVDLHEH 103 HSP 2 Score: 25.409 bits (54), Expect = 4.326e-14 Identity = 12/34 (35.29%), Postives = 18/34 (52.94%), Query Frame = -1 Query: 361 KSVGITE---LCHLCNRYIRLRERYNHESRCTGV 453 KS+ + E CH CN+ I + ++H RC V Sbjct: 142 KSIPVPESNICCHYCNQMIPGNKYFHHLDRCRRV 175
BLAST of DT214517 vs. ExPASy Swiss-Prot
Match: XAF1_HUMAN (XIAP-associated factor 1 OS=Homo sapiens GN=XAF1 PE=1 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.844e-14 Identity = 34/96 (35.42%), Postives = 51/96 (53.12%), Query Frame = -2 Query: 537 ICSHCDRAIPSSNIDLHFAHCSRNLERCKVCGDMVPRKYAEEHFLNTHAPVACSQCSETMEREILAIHKGENCPQRIVTCDFCEFPLPAVDLAEHQ 824 +C +C R + S+N LH A+C R L C C + VP++ EEH H V C+ C ++M++ L HK C +R V C FC+ + L H+ Sbjct: 7 VCRNCKRHVVSANFTLHEAYCLRFLVLCPECEEPVPKETMEEHCKLEHQQVGCTMCQQSMQKSSLEFHKANECQERPVECKFCKLDMQLSKLELHE 102 The following BLAST results are available for this feature:
BLAST of DT214517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DT214517 ID=DT214517; Name=DT214517; organism=Citrus sinensis; type=EST; length=828bpback to top |