EY728649
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD2_ARATH (Spermidine synthase 2 OS=Arabidopsis thaliana GN=SPDSYN2 PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 1.873e-39 Identity = 81/120 (67.50%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 337 MAETGSAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDSN----KQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 M+ T A+ TD P+KRPR EA +NNG ME ++ K+P C+SS+IPGWFSEISPMWPGEAHSLKVEKIL QGKSDYQ+V+VFQS+TYGKVL+LDGVI LTERD C YQEMI Sbjct: 1 MSSTQEASVTDLPVKRPR-----EAEEDNNGGA-METENGGGEIKEPSCMSSIIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMI 114 HSP 2 Score: 23.8682 bits (50), Expect = 1.873e-39 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 116 HLPLCSISNPKKV 128
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPDE_SOLLC (Spermidine synthase OS=Solanum lycopersicum GN=SPDSYN PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 2.364e-36 Identity = 77/111 (69.37%), Postives = 88/111 (79.28%), Query Frame = 1 Query: 364 TDFPLKRPRDD-GEKE---ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 T+ P+KRPR++ E E ANN+NNG + + ISSV+PGWFSEISP+WPGEAHSLKVEKIL QGKSDYQNV+VFQSSTYGKVL+LDGVI LTERD C YQEMI Sbjct: 12 TELPVKRPREEEAETEMEAANNSNNGC-----EKEESSPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVLVFQSSTYGKVLVLDGVIQLTERDECAYQEMI 117 HSP 2 Score: 23.483 bits (49), Expect = 2.364e-36 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 119 HLPLCSIPNPKKV 131
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD1_ARATH (Spermidine synthase 1 OS=Arabidopsis thaliana GN=SPDSYN1 PE=1 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.811e-36 Identity = 75/112 (66.96%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 358 AATDFPLKRPRDDGEKEANNNNNGSVLMEM---DSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 +ATD LKRPR++ ++N G+ ME D K+P C S+VIPGWFSE+SPMWPGEAHSLKVEK+L QGKSDYQ+V+VFQS+TYGKVL+LDGVI LTERD C YQEMI Sbjct: 7 SATD--LKRPREE------DDNGGAATMETENGDQKKEPACFSTVIPGWFSEMSPMWPGEAHSLKVEKVLFQGKSDYQDVIVFQSATYGKVLVLDGVIQLTERDECAYQEMI 110 HSP 2 Score: 23.483 bits (49), Expect = 6.811e-36 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 112 HLPLCSIPNPKKV 124
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD1_PEA (Spermidine synthase 1 OS=Pisum sativum GN=SPDSYN1 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 2.554e-35 Identity = 76/108 (70.37%), Postives = 85/108 (78.70%), Query Frame = 1 Query: 361 ATDFPLKRPRDDGEKEANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 +TD PLKR R+D E N ++ + QP+ +SSVIPGWFSEISPMWPGEAHSLKVEKIL QGKSDYQ+VMVFQS+TYGKVLILDGVI LTERD C YQEMI Sbjct: 10 STDSPLKRQRED---EVNGVSD-----TLSKEPQPNGLSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQDVMVFQSATYGKVLILDGVIQLTERDECAYQEMI 109 HSP 2 Score: 23.483 bits (49), Expect = 2.554e-35 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 111 HLPLCSIPNPKKV 123
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD2_DATST (Spermidine synthase 2 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 4.337e-35 Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 1 Query: 412 NNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 NNNNNG ++K+ CISSV+PGWFSEISP+WPGEAHSLKVEKIL QGKSDYQ+VMVFQS+TYGKVL+LDGVI LTERD C YQEMI Sbjct: 7 NNNNNGCT-----NDKESPCISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQDVMVFQSTTYGKVLVLDGVIQLTERDECAYQEMI 92 HSP 2 Score: 23.483 bits (49), Expect = 4.337e-35 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 94 HLPLCSIPNPKKV 106
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPDE_NICSY (Spermidine synthase OS=Nicotiana sylvestris PE=2 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 4.680e-34 Identity = 72/92 (78.26%), Postives = 78/92 (84.78%), Query Frame = 1 Query: 409 ANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 AN+NNNG +N+ P ISSV+PGWFSEISP+WPGEAHSLKVEKIL QGKSDYQNVMVFQSSTYGKVL+LDGVI LTERD C YQEMI Sbjct: 4 ANHNNNGC------TNESP-YISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMI 88 HSP 2 Score: 23.483 bits (49), Expect = 4.680e-34 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 90 HLPLCSIPNPKKV 102
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD1_DATST (Spermidine synthase 1 OS=Datura stramonium PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 7.942e-34 Identity = 68/82 (82.93%), Postives = 73/82 (89.02%), Query Frame = 1 Query: 439 MEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 ME +NK+ ISS++PGWFSEISP+WPGEAHSLKVEKIL QGKSDYQNVMVFQSSTYGKVLILDGVI LTERD C YQEMI Sbjct: 1 MEEANNKESPYISSILPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLILDGVIQLTERDECAYQEMI 82 HSP 2 Score: 23.483 bits (49), Expect = 7.942e-34 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 84 HLPLCSIPNPKKV 96
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPDE_COFAR (Spermidine synthase OS=Coffea arabica PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.034e-33 Identity = 67/74 (90.54%), Postives = 69/74 (93.24%), Query Frame = 1 Query: 463 PDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 PD +SSVIPGWFSEISPMWPGEAHSLKVEKIL QGKSDYQNVMVFQSSTYGKVL+LDGVI LTERD C YQEMI Sbjct: 17 PDGVSSVIPGWFSEISPMWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMI 90 HSP 2 Score: 23.8682 bits (50), Expect = 1.034e-33 Identity = 9/13 (69.23%), Postives = 11/13 (84.62%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ + KKV Sbjct: 92 HLPLCSIPSPKKV 104
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD2_PEA (Spermidine synthase 2 OS=Pisum sativum GN=SPDSYN2 PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 1.345e-33 Identity = 74/114 (64.91%), Postives = 88/114 (77.19%), Query Frame = 1 Query: 352 SAAATDFPLKRPRDDGEKEANNNNNGSVLMEMDS-NKQP--DCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 S + +K RDD EK +N + +V M+++ +K P + +SSVIPGWFSEISPMWPGEAHSLK+EKIL QGKS+YQ VMVFQSSTYGKVL+LDGVI LTERD C YQEMI Sbjct: 5 STVELESSMKEHRDDDEK-SNGFSVSAVSMDVEGGDKDPSGNGVSSVIPGWFSEISPMWPGEAHSLKIEKILFQGKSEYQKVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMI 117 HSP 2 Score: 23.483 bits (49), Expect = 1.345e-33 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 119 HLPLCSIPNPKKV 131
BLAST of EY728649 vs. ExPASy Swiss-Prot
Match: SPD1_HYONI (Spermidine synthase 1 OS=Hyoscyamus niger PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 2.284e-33 Identity = 69/93 (74.19%), Postives = 76/93 (81.72%), Query Frame = 1 Query: 406 EANNNNNGSVLMEMDSNKQPDCISSVIPGWFSEISPMWPGEAHSLKVEKILXQGKSDYQNVMVFQSSTYGKVLILDGVIXLTERDXCGYQEMI 684 E N +NG ++ K+ ISSV+PGWFSEISP+WPGEAHSLKVEKIL QGKSDYQNVMVFQSSTYGKVL+LDGVI LTERD C YQEMI Sbjct: 2 EVTNQSNGC----SNNEKESPYISSVLPGWFSEISPLWPGEAHSLKVEKILFQGKSDYQNVMVFQSSTYGKVLVLDGVIQLTERDECAYQEMI 90 HSP 2 Score: 23.483 bits (49), Expect = 2.284e-33 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 3 Query: 687 HLPLCSLQTRKKV 725 HLPLCS+ KKV Sbjct: 92 HLPLCSIPNPKKV 104 The following BLAST results are available for this feature:
BLAST of EY728649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >EY728649 ID=EY728649; Name=EY728649; organism=Citrus sinensis; type=EST; length=798bpback to top |