EY676889

Overview
NameEY676889
Unique NameEY676889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1007
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1298 contig Csv1_Contig1298:68..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_BOVIN (DnaJ homolog subfamily B member 6 OS=Bos taurus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.116e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASAEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_PONAB (DnaJ homolog subfamily B member 6 OS=Pongo abelii GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.904e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_MACFA (DnaJ homolog subfamily B member 6 OS=Macaca fascicularis GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.904e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_HUMAN (DnaJ homolog subfamily B member 6 OS=Homo sapiens GN=DNAJB6 PE=1 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.904e-13
Identity = 36/66 (54.55%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKLALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_CHICK (DnaJ homolog subfamily B member 6 OS=Gallus gallus GN=DNAJB6 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.904e-13
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRKLA++WHPD   K P    +A+ +F+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQKHASAEDIKKAYRKLALKWHPD---KNPENKEEAEQQFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB8_MOUSE (DnaJ homolog subfamily B member 8 OS=Mus musculus GN=Dnajb8 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.242e-13
Identity = 35/67 (52.24%), Postives = 50/67 (74.63%), Query Frame = 3 
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            +YY VLGV   +S E+I++AYRKLA++WHPD   K P    +A+ KF+++ EAY VLSD +KR++YD
Sbjct:    3 NYYEVLGVQSSASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB8_HUMAN (DnaJ homolog subfamily B member 8 OS=Homo sapiens GN=DNAJB8 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.242e-13
Identity = 36/67 (53.73%), Postives = 49/67 (73.13%), Query Frame = 3 
Query:   69 SYYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            +YY VLGV   +S E+I++AYRKLA++WHPD   K P    +A+ KF+ + EAY VLSD +KR+LYD
Sbjct:    3 NYYEVLGVQASASPEDIKKAYRKLALRWHPD---KNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_XENTR (DnaJ homolog subfamily B member 6 OS=Xenopus tropicalis GN=dnajb6 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 7.236e-13
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  ++S E+I++AYRKLA++WHPD   K P    +A+ +F+E+ EAY VLSD +KR +YD
Sbjct:    4 YYDVLGVQRNASPEDIKKAYRKLALKWHPD---KNPDNKDEAERRFKEVAEAYEVLSDSKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_RAT (DnaJ homolog subfamily B member 6 OS=Rattus norvegicus GN=Dnajb6 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 9.450e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRK A++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
[Close]
BLAST of EY676889 vs. ExPASy Swiss-Prot
Match: DNJB6_MOUSE (DnaJ homolog subfamily B member 6 OS=Mus musculus GN=Dnajb6 PE=1 SV=4)

HSP 1 Score: 74.7146 bits (182), Expect = 9.450e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 3 
Query:   72 YYSVLGVSVHSSVEEIRRAYRKLAMQWHPDRWTKTPSLLGKAKVKFQEIQEAYSVLSDERKRTLYD 269
            YY VLGV  H+S E+I++AYRK A++WHPD   K P    +A+ KF+++ EAY VLSD +KR +YD
Sbjct:    4 YYEVLGVQRHASPEDIKKAYRKQALKWHPD---KNPENKEEAERKFKQVAEAYEVLSDAKKRDIYD 66
The following BLAST results are available for this feature:
BLAST of EY676889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
DNJB6_BOVIN1.116e-1354.55DnaJ homolog subfamily B member 6 OS=Bos taurus GN... [more]
DNJB6_PONAB1.904e-1354.55DnaJ homolog subfamily B member 6 OS=Pongo abelii ... [more]
DNJB6_MACFA1.904e-1354.55DnaJ homolog subfamily B member 6 OS=Macaca fascic... [more]
DNJB6_HUMAN1.904e-1354.55DnaJ homolog subfamily B member 6 OS=Homo sapiens ... [more]
DNJB6_CHICK1.904e-1353.03DnaJ homolog subfamily B member 6 OS=Gallus gallus... [more]
DNJB8_MOUSE4.242e-1352.24DnaJ homolog subfamily B member 8 OS=Mus musculus ... [more]
DNJB8_HUMAN4.242e-1353.73DnaJ homolog subfamily B member 8 OS=Homo sapiens ... [more]
DNJB6_XENTR7.236e-1353.03DnaJ homolog subfamily B member 6 OS=Xenopus tropi... [more]
DNJB6_RAT9.450e-1353.03DnaJ homolog subfamily B member 6 OS=Rattus norveg... [more]
DNJB6_MOUSE9.450e-1353.03DnaJ homolog subfamily B member 6 OS=Mus musculus ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C04-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676889 ID=EY676889; Name=EY676889; organism=Citrus sinensis; type=EST; length=1007bp
CTTTTGATGTTTGAACCCGAACAAAATTATGAAAGATGGAGGCAGAGAGT
GAAAGGACAGTGCAGCCATCTTATTACAGCGTTCTGGGTGTGAGTGTGCA
CTCTTCTGTTGAAGAAATAAGGCGCGCTTATCGCAAGCTTGCTATGCAAT
GGCATCCTGATCGGTGGACAAAGACTCCATCTTTGTTGGGTAAAGCCAAG
GTTAAATTCCAGGAAATTCAAGAAGCCTATTCTGTTTTGTCAGATGAGAG
GAAGAGGACACTATATGATGCAGGGTTATATGACCCTGAAGAAGAAGAGG
AAGAGGGATTTTCAGATTTTGTGCAAGAAATGCTGTCTCTAATGGCTGAA
GCCAGGAAAGAGGACAAAAGCTACAGCATGGAGGAGCTGCAAACAATGTT
CATGGAAATGGCACAAGAATTTGAGCAGTCCTCGTGGTTCTGCGGATACC
CAGTTGCTGATGATTCCTGCTCCTTGGAGAGTACACAGTGGAATACAAAT
TCATAGACAATAATAAAAACGCACAATTTGGTGCTTTTCCAGGTGGCAGT
TCTATGGACCAAGTGGTTTTTGCAGAAAAAAAATCCATTTGGAATCAAAC
ATTGGAAGCAAGAATTTAAACATGAAAACCAACCAGTGAACCCCTGAATT
TTTGCTCCAATTAATTTTGGGGGGGGGAAAACACACCAATTTTTGGGGGA
AAAACGTCTTTTGCCCCCCAATGCCCCCCCTTTTCGGGGGATTTTGGGCC
TTTTTAAACCGGGGGGCTAAAACCCCTTTTGGGGCTTCCGTTTTTTTGGG
GGAGATACCTGGCGGGGGAAAAAAACCCCTTTGGGTTTGTTTTTTTTTTT
TTTCTTCCAAAACAAAAAAAAAAAAAAAAAAAAAATATCTCGGGGGGGGG
GGGGAATTTTATATTTTCTTCTTTTTTTTTTATTTTTTTTTGTGGAAAAA
AAACAAAAAAAAAAACAAAAAAGAGGGGGAGTAAAAGAAAAAAGGAGGGT
CCACTTG
back to top