EY676888

Overview
NameEY676888
Unique NameEY676888
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length994
Libraries
Library NameType
Sweet orange leaf, infected with CiLVcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: HYDA_PSEAE (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas aeruginosa GN=dht PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.104e-49
Identity = 98/191 (51.31%), Postives = 130/191 (68.06%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGGGL 575
            ++EIA+AR  GQ V GE     L+LDDS   H D+ TAA YVMSPP R   H +AL   L +G L    TDHC F + QKA G DDF KIPNG  GIE+RM L+WD  V SG++S+ ++V LTST  A+IFN++PRKGAI VG+DAD+++++P  S  ++A +HH R+D N++EGR V+G    T + G L
Sbjct:  246 LDEIAYARAKGQPVYGEVLAGHLLLDDSVYRHPDWATAAGYVMSPPFRPVEHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSKIPNGTAGIEDRMALLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGSRTLSAATHHQRVDFNIFEGRTVRGIPSHTISQGKL 436          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: HYDA_PSEPU (D-hydantoinase/dihydropyrimidinase OS=Pseudomonas putida GN=dht PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 7.484e-47
Identity = 90/180 (50.00%), Postives = 125/180 (69.44%), Query Frame = 3
Query:    3 MEEIAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKG 542
            ++EI +AR  GQ V GE     L+LDDS     D+ TAA YVMSPP R   H +AL   L +G L    TDHC F + QKA G DDF +IPNG  GIE+RM ++WD  V SG++S+ ++V LTST  A+IFN++PRKGAI VG+DAD+++++P  +  ++A++HH R+D N++EGR V+G
Sbjct:  246 LDEITYARAKGQPVYGEVLPGHLLLDDSVYRDPDWATAAGYVMSPPFRPREHQEALWRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSRIPNGTAGIEDRMAVLWDAGVNSGRLSMHEFVALTSTNTAKIFNLFPRKGAIRVGADADLVLWDPQGTRTLSAQTHHQRVDFNIFEGRTVRG 425          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DHP1_CAEBR (Dihydropyrimidinase 1 OS=Caenorhabditis briggsae GN=dhp-1 PE=3 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.851e-46
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGGGLFGKWMTEGRSRSGNFKKGVPLLSFS 650
            I+H R  G  V GEP  +GL LD S  ++ D++ AA+YVMSPP+ R     + L   LA G L L GTD+C ++  QK+ G  +F KIPNG+NG+E+RM +VW+  V SG I    YV +TS   A+IFN+YP+KG I VGSDADI+IFNPN++  I+A +HH  +D N++EG K  G  E+T + G +   W            K VPLL+ S
Sbjct:  255 ISHHRAQGSIVFGEPIAAGLALDGSHYYNEDWLHAARYVMSPPLSRDPTTPELLMKLLAAGELHLTGTDNCTYDGCQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSATAAKIFNIYPKKGRIAVGSDADIVIFNPNATRTISAETHHHNLDFNIFEGIKCHGVAEITISRGRIV--WANGQLQTVPGSGKFVPLLANS 466          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DPYS_DICDI (Dihydropyrimidinase OS=Dictyostelium discoideum GN=pyd2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.081e-45
Identity = 94/189 (49.74%), Postives = 122/189 (64.55%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGGGL 575
            I   RK G RV GEP  +GL +D S +W+ D+  AA +VM PPIR     K  L   LA G L  VGTD+C F + QKA G DDF KIPNGVNG+E+RM +VW+  V +G+++   +VR TS+E ARIFN+YPRKG I VG D DI+I++PN S  I+  +HH  +D N++EG KV G    T   G +
Sbjct:  257 ICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENGVNTGKLTWCQFVRATSSEAARIFNIYPRKGRIDVGCDGDIVIWDPNQSKTISKDTHHHAVDFNIFEGIKVTGIAVTTIVAGNI 445          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DHP2_CAEEL (Dihydropyrimidinase 2 OS=Caenorhabditis elegans GN=dhp-2 PE=1 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 5.363e-45
Identity = 94/187 (50.27%), Postives = 123/187 (65.78%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            IAH RK G  V GEP  +GL  D S  ++ D++ AA+YVMSPP+ R      AL   LA G L L  TD+C F+  QK+ G DDF KIPNGVNG+E+RM +VWD  V +G I    +V +TST  A+IFN YP+KG I VGSDADI+I+N N++  I+  +HH  ID N++EG +V G  E+T + G
Sbjct:  251 IAHHRKKGAVVFGEPIAAGLATDGSHYYNEDWLHAARYVMSPPLSRDPSTPSALMKLLAAGELHLTATDNCTFDCQQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMRFVAVTSTMAAKIFNCYPQKGRIAVGSDADIVIWNANATRTISKDTHHHAIDFNIFEGMQVHGVPEITISRG 437          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DHP1_CAEEL (Dihydropyrimidinase 1 OS=Caenorhabditis elegans GN=dhp-1 PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 5.363e-45
Identity = 101/217 (46.54%), Postives = 136/217 (62.67%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGGGL---FGKWMTEGRSRSGNFKKGVPLLSFS 650
            I+H R  G  V GEP  +GL LD S  ++ D++ AA+YVMSPP+ R     + L   LA G L L GTD+C ++  QK+ G  +F KIPNG+NG+E+RM +VW+  V SG I    YV +TS+  A+IFN+YPRKG I VGSDADI+IFNPN++  I+  +HH  +D N++EG    G  EVT + G +    GK  T     SG F   +PLL+ S
Sbjct:  255 ISHHRAQGSIVFGEPIAAGLALDGSHYYNEDWLHAARYVMSPPLSRDPTTPELLMKLLAAGELHLTGTDNCTYDCRQKSLGKGNFTKIPNGINGVEDRMSVVWEKGVHSGIIDPMRYVSITSSTAAKIFNIYPRKGRIAVGSDADIVIFNPNATRTISKDTHHHNLDFNIFEGINCHGVAEVTISRGRIVWAHGKLQTV--PGSGKF---IPLLANS 466          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DHP2_CAEBR (Dihydropyrimidinase 2 OS=Caenorhabditis briggsae GN=dhp-2 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 9.148e-45
Identity = 93/187 (49.73%), Postives = 121/187 (64.71%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPI-RASGHNKALQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            IAH RK G  V GEP  +GL  D S  ++ D++ AA+Y+MSPP+ R      AL   LA G L L  TD+C F+  QK+ G DDF KIPNGVNG+E+RM +VWD  V +G I    +V +TST  A+IFN YPRKG I VGSDADI+++N N++  I+  +HH  ID N++EG +V G  E T   G
Sbjct:  251 IAHHRKKGAVVFGEPIAAGLATDGSHYYNEDWLHAARYIMSPPLSRDPSTPNALMKLLAAGELHLTATDNCTFDCHQKSLGKDDFTKIPNGVNGVEDRMSVVWDKGVHAGIIDPMKFVAVTSTMAAKIFNCYPRKGRIAVGSDADIVVWNANATRTISKDTHHHAIDFNIFEGMQVHGVPETTICRG 437          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DPYS_MOUSE (Dihydropyrimidinase OS=Mus musculus GN=Dpys PE=2 SV=2)

HSP 1 Score: 170.629 bits (431), Expect = 1.236e-41
Identity = 85/187 (45.45%), Postives = 120/187 (64.17%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            +A AR+AG  V GEP  +GL  D    W  ++  AA +VM PP+R        L   LA G L   G+D+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YP+KG I VGSDADI+I++P ++  I+A++HH  ++ N++EG    G   VT + G
Sbjct:  258 VADARRAGNVVYGEPIAAGLGTDGRQYWSEEWSHAAHHVMGPPLRPDPLTPGFLMDLLANGDLTTTGSDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRRISAKTHHQAVNFNIFEGMVCHGVPLVTISRG 444          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DPYS_RAT (Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys PE=1 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 2.109e-41
Identity = 84/187 (44.92%), Postives = 122/187 (65.24%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            IA A++ G+ V GEP  +GL  D +  W+ ++  AA +VM PP+R        L   LA G L   G+D+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YP+KG I VGSDADI+I++P ++  I+A++HH  ++ N++EG    G   VT + G
Sbjct:  258 IADAKREGKVVYGEPIAAGLGTDGTQYWNKEWRHAAHHVMGPPLRPDPSTPGFLMNLLANGDLTTTGSDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPKKGRIAVGSDADIVIWDPEATRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRG 444          
BLAST of EY676888 vs. ExPASy Swiss-Prot
Match: DPYS_HUMAN (Dihydropyrimidinase OS=Homo sapiens GN=DPYS PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.367e-40
Identity = 85/187 (45.45%), Postives = 119/187 (63.64%), Query Frame = 3
Query:   12 IAHARKAGQRVIGEPAVSGLVLDDSWLWHSDFVTAAKYVMSPPIRASGHNKA-LQAALATGILQLVGTDHCAFNSTQKAFGIDDFRKIPNGVNGIEERMHLVWDTMVESGQISVTDYVRLTSTECARIFNVYPRKGAILVGSDADIIIFNPNSSFEITARSHHSRIDTNVYEGRKVKGKVEVTNAGG 569
            IA AR+ G+ V GEP  + L  D +  W+ ++  AA +VM PP+R        L   LA   L   GTD+C FN+ QKA G DDF KIPNGVNG+E+RM ++W+  V SG++    +V +TST  A+IFN+YPRKG I VGSDADI+I++P  +  I+A++HH  ++ N++EG    G   VT + G
Sbjct:  258 IADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDADIVIWDPKGTRTISAKTHHQAVNFNIFEGMVCHGVPLVTISRG 444          
The following BLAST results are available for this feature:
BLAST of EY676888 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 113
Match NameE-valueIdentityDescription
HYDA_PSEAE2.104e-4951.31D-hydantoinase/dihydropyrimidinase OS=Pseudomonas ... [more]
HYDA_PSEPU7.484e-4750.00D-hydantoinase/dihydropyrimidinase OS=Pseudomonas ... [more]
DHP1_CAEBR4.851e-4645.79Dihydropyrimidinase 1 OS=Caenorhabditis briggsae G... [more]
DPYS_DICDI1.081e-4549.74Dihydropyrimidinase OS=Dictyostelium discoideum GN... [more]
DHP2_CAEEL5.363e-4550.27Dihydropyrimidinase 2 OS=Caenorhabditis elegans GN... [more]
DHP1_CAEEL5.363e-4546.54Dihydropyrimidinase 1 OS=Caenorhabditis elegans GN... [more]
DHP2_CAEBR9.148e-4549.73Dihydropyrimidinase 2 OS=Caenorhabditis briggsae G... [more]
DPYS_MOUSE1.236e-4145.45Dihydropyrimidinase OS=Mus musculus GN=Dpys PE=2 S... [more]
DPYS_RAT2.109e-4144.92Dihydropyrimidinase OS=Rattus norvegicus GN=Dpys P... [more]
DPYS_HUMAN1.367e-4045.45Dihydropyrimidinase OS=Homo sapiens GN=DPYS PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-401-028-C03-CT.F Sweet orange leaf, infected with CiLV Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY676888 ID=EY676888; Name=EY676888; organism=Citrus sinensis; type=EST; length=994bp
CAATGGAAGAAATAGCTCATGCTCGAAAAGCAGGGCAGAGGGTCATTGGA
GAGCCCGCAGTTTCTGGATTAGTCCTTGATGATTCTTGGCTTTGGCATTC
AGATTTTGTCACTGCTGCAAAGTATGTCATGAGTCCCCCTATTAGAGCAT
CAGGACACAACAAGGCTCTACAAGCTGCCCTTGCAACTGGGATTTTGCAG
CTTGTAGGAACTGATCATTGTGCCTTTAATTCTACACAAAAGGCTTTTGG
TATTGATGATTTCCGGAAGATACCAAATGGTGTGAATGGTATCGAAGAGA
GGATGCATTTGGTCTGGGATACAATGGTGGAATCTGGCCAAATTTCTGTG
ACTGATTATGTCAGGTTAACTAGCACTGAATGTGCTAGAATATTCAACGT
ATATCCCAGAAAAGGAGCAATTCTTGTTGGATCTGATGCAGATATAATTA
TATTCAACCCAAATTCAAGCTTTGAAATTACTGCAAGGTCCCACCACTCT
AGAATAGATACAAATGTCTATGAAGGCAGGAAAGTAAAAGGGAAAGTTGA
AGTGACGAATGCTGGGGGCGGGTTGTTTGGGAAATGGATGACTGAAGGCC
GTTCCAGGTCCGGAAATTTCAAAAAAGGCGTCCCTTTATTATCTTTTTCT
GGGAATTGAAAAAGCCGAAGGTAATTTTTTTTTCTTCCCCCCAAGCCCCA
GGGAACGGTCTTAACCCCTCACCTAAAATTACGGGTTTTAACCTTTTTTT
TTTTTTTTTCATTTTGTGGTACAAAAATTTAAAAGGAAAAACCCGCCCCC
CATGGTCTAAAATTTTGGTGTTAGGCTTGGGAACTTTTAAAAAAAAAAAA
TTTCATCCTTGTTTTTTCCCCCCCCGGGGGAAACAAAAAAAAAAAAAAAA
CACGCGGCCCCCATCCTCATTTTTTTTAAAAAAAAAAGATATTTGACCCA
CGGGTGGTAATTAAAAAAATATTTTTTTTTTTTTTTTTTTACAA
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