EY676880
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY676880 vs. ExPASy Swiss-Prot
Match: CB13_SOLLC (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum GN=CAB8 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.928e-43 Identity = 89/113 (78.76%), Postives = 97/113 (85.84%), Query Frame = 2 Query: 95 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAMHRKILAKQASI 433 E ARQI+G+R +QS T RK SFVVRAASTPPVKQGA+R LWFASKQSLSYLDG LPGD+GFDPLGLSDPEGTGGFIEPKWLAYGEVINGR+AMLGA GA+ +IL K I Sbjct: 17 EAARQIIGSRISQSVT---RKASFVVRAASTPPVKQGANRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEILGKAGLI 126 HSP 2 Score: 69.707 bits (169), Expect = 3.319e-11 Identity = 48/99 (48.48%), Postives = 58/99 (58.59%), Query Frame = 1 Query: 379 VGSCGSHAPENSGKAGLNPQETALAWSQTGVIPPTGTINYRGKTFKPFFVLENATSGDFAETRKIPKRGKIPEIKGEGKISSGF*KKIWEGFRGNPGFP 675 +G+ G+ APE GKAGL PQETALAW QTGVIPP GT NY + FVLE A G FAE R+ K P G+ + G K + G G+P +P Sbjct: 109 LGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNY-TLFVLEMALMG-FAEHRRFQDWAK-PGSMGK-QYFLGLEKGL--GGSGDPAYP 201
BLAST of EY676880 vs. ExPASy Swiss-Prot
Match: CB23_PEA (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum GN=lhca3 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 6.856e-41 Identity = 86/110 (78.18%), Postives = 92/110 (83.64%), Query Frame = 2 Query: 95 ETARQILGARSAQSPTGSSRKGSFVVRAASTPPVKQGA-DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAMHRKILAK 421 E RQ ARS S G SRKG +VRAA+TPPVKQG DRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEP+WLAYGEVINGR+AMLGAVGA+ + L K Sbjct: 17 EAVRQSFRARSLPSSVGCSRKG--LVRAAATPPVKQGGVDRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAVGAIAPEYLGK 124 HSP 2 Score: 71.2478 bits (173), Expect = 1.141e-11 Identity = 46/101 (45.54%), Postives = 56/101 (55.45%), Query Frame = 1 Query: 379 VGSCGSHAPENSGKAGLNPQETALAWSQTGVIPPTGTINYRGKTFKPFFVLENATSGDFAETRKIPKRGKIPEIKGEGKISSGF*KKIWEGF--RGNPGFP 675 +G+ G+ APE GK GL PQETALAW QTGVIPP GT NY + FVLE A G FAE R+ K G + + + +GF GNP +P Sbjct: 111 LGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNY-TLFVLEMALMG-FAEHRRFQDWAK------PGSMGKQYFLGLEKGFGGSGNPAYP 203
BLAST of EY676880 vs. ExPASy Swiss-Prot
Match: CB12_PETHY (Chlorophyll a-b binding protein, chloroplastic OS=Petunia hybrida PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 6.048e-13 Identity = 47/110 (42.73%), Postives = 58/110 (52.73%), Query Frame = 2 Query: 110 ILGARSAQSPTGSS-RKGSFVV----RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAMHRKILAK 421 I+GA A G R F+ R+ + V DRPLWF +LDGSLPGD+GFDPLGL SDPE KW A E+++ R+AMLGA G + L K Sbjct: 26 IVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESL------KWNAQAELVHSRWAMLGAAGIFIPEFLTK 129
BLAST of EY676880 vs. ExPASy Swiss-Prot
Match: CB12_SOLLC (Chlorophyll a-b binding protein 7, chloroplastic OS=Solanum lycopersicum GN=CAB7 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.298e-12 Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 173 RAASTPPVKQGADRPLWFASKQSLSYLDGSLPGDYGFDPLGL-SDPEGTGGFIEPKWLAYGEVINGRYAMLGAVGAMHRKILAK 421 R+A+T V DRPLWF +LDGSLPGD+GFDPLGL SDPE +W E+++ R+AMLGA G ++L K Sbjct: 52 RSATTVCVAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESL------RWNQQAELVHCRWAMLGAAGIFIPELLTK 129 The following BLAST results are available for this feature:
BLAST of EY676880 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY676880 ID=EY676880; Name=EY676880; organism=Citrus sinensis; type=EST; length=1073bpback to top |