EY758155

Overview
NameEY758155
Unique NameEY758155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3171 contig Csv1_Contig3171:331..1000. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY758155 vs. ExPASy Swiss-Prot
Match: U136_ARATH (UPF0136 membrane protein At2g26240 OS=Arabidopsis thaliana GN=At2g26240 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.038e-11
Identity = 40/107 (37.38%), Postives = 52/107 (48.60%), Query Frame = 2 
Query:  110 MGMSMSQKXXXXXXXXXXXXXXXXXXKSGSQKXXXXXXXXXXXXYYVYTQLPTKPVXXXXXXXXXXXXXXXVMGSRFKKSGKVFPAGVVSLISLVMTGGYLHGIMRS 430
            M  S+SQK                  K GS+             YYVYT+LP  PV               +MGSR+ ++ KV PAG+VS++SLVMTG YLHG++RS
Sbjct:    1 MDSSLSQKFTLAYASLLGVGGLMGYLKRGSKISLVAGGGSAALFYYVYTELPGNPVLASSIGIVGSAALTGMMGSRYLRTRKVVPAGLVSVVSLVMTGAYLHGLIRS 107
The following BLAST results are available for this feature:
BLAST of EY758155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
U136_ARATH2.038e-1137.38UPF0136 membrane protein At2g26240 OS=Arabidopsis ... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-040-G09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY758155 ID=EY758155; Name=EY758155; organism=Citrus sinensis; type=EST; length=670bp
GCGCTCCGGTCCGNATTACCGCCCTCGACCCACGCGTCCGCGGAGCTGAG
GTGAAGGTGAAGGTGAAGGTGACGGGGAGTCGTCNGACGAAAGTGGGAAG
AAGAATAAGATGGGGATGTCTATGTCTCAGAAACTCACTCTTGGTTATGC
TGCCCTTGTTGGAGTGGGTGGTCTTATGGGATATCTGAAAAGTGGGAGTC
AGAAGTCTCTGTTAGCAGGAGGAGTGTCGGCCTCGCTGCTTTATTATGTT
TATACTCAGCTTCCCACAAAGCCAGTTCTTGCATCTTCCATAGGGCTTGG
CTTATCTGCTGCTCTTTTGGGAGTGATGGGTTCTCGTTTCAAGAAGTCAG
GGAAGGTATTTCCAGCCGGTGTGGTCTCTCTCATTTCCCTTGTGATGACA
GGGGGATACCTACATGGCATCATGCGCAGTCTGCATTAAAATTCATATAA
TGTTAAGACAGTGATGGTAGAGATGAAGTTTTAGCGTTCCTGTTTATGTG
GTAACTGCAATGAGTGTTTTTGGCATGTAAAGTCCTTGAGACTATAGATG
TTGAGTGTGTGAACATTTTGTATACCATCTTTCCGGAGTTTACAGTGTTG
GAAAGCACGTGCATGTAAATTGTGCTCGTGCCATTGTAGGTCTTGTTCCA
AAAAAAAAAAAAAAAAAAAA
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