CN189646

Overview
NameCN189646
Unique NameCN189646
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length648
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIN3_ARATH (Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thaliana GN=EIN3 PE=1 SV=1)

HSP 1 Score: 407.142 bits (1045), Expect = 3.876e-113
Identity = 187/214 (87.38%), Postives = 201/214 (93.93%), Query Frame = 2
Query:    5 VQPSEPEATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPH 646
            V  +EP++ VEDDYTD+E+DVDELERRMW+DKMR+KRLKEQ +GKEG+D AKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPE GKPVTGASDNLREWWKDKVRFDRNGPAAITKYQA+N++PG +EG N IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGV PPWWP GKE+WWPQLGLPKDQG  PYKKPH
Sbjct:   28 VPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPH 241          
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIL1_ARATH (ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidopsis thaliana GN=EIL1 PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 5.074e-105
Identity = 180/214 (84.11%), Postives = 196/214 (91.59%), Query Frame = 2
Query:   14 SEPEATVED-DYTDEEMDVDELERRMWKDKMRIKRLKEQ-SRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINA-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPH 646
            +E E  VED DYTD+EMDVDELE+RMW+DKMR+KRLKEQ S+ KEG+D +KQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAI KYQ++N++ G +   N+ +GPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWP G EEWWPQLGLP +QG PPYKKPH
Sbjct:   30 AEQEPVVEDVDYTDDEMDVDELEKRMWRDKMRLKRLKEQQSKCKEGVDGSKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQSENNISGGSNDCNSLVGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPNGNEEWWPQLGLPNEQGPPPYKKPH 243          
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIL3_ARATH (ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidopsis thaliana GN=EIL3 PE=1 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 9.972e-77
Identity = 134/206 (65.05%), Postives = 167/206 (81.07%), Query Frame = 2
Query:   35 EDDYTDEEMDVDELERRMWKDKMRIKRLKE-QSRGKEGIDMAKQ-RQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPH 646
            E D +DEE+D D+LERRMWKD++R+KR+KE Q  G +G    +  ++  +QA+RKKMSRAQDGILKYMLK+MEVCK +GFVYGIIPEKGKPV+G+SDN+R WWK+KV+FD+NGPAAI KY+ +    GK++G      +   LQ+LQD TLGSLLS+LMQHCDPPQR++PLEKG  PPWWPTG EEWW +LGLPK Q +PPY+KPH
Sbjct:   27 EIDVSDEEIDADDLERRMWKDRVRLKRIKERQKAGSQGAQTKETPKKISDQAQRKKMSRAQDGILKYMLKLMEVCKVRGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEEECLAFGKSDGNR---NSQFVLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGTPPPWWPTGNEEWWVKLGLPKSQ-SPPYRKPH 228          
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIL2_ARATH (ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidopsis thaliana GN=EIL2 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 7.653e-69
Identity = 129/213 (60.56%), Postives = 157/213 (73.71%), Query Frame = 2
Query:   26 ATVEDDYTDEEMDVDELERRMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAD-NSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKD-QGA-PPYKKPH 646
            A  +D  +DEEM+++ELE+++W+DK R+KRLKE ++   G  +  ++Q     E + ++ M +AQDGILKYM K ME  KAQGFVYGI+ E GK V G+SDNLREWWKDKVRFDRNGPAAI K+Q D N   G + G      T   L ELQDTTLG+LLSAL  HC+PPQRRFPLEKGV+PPWWPTGKE+WW QL LP D +G  PPYKKPH
Sbjct:   34 ALCDDLSSDEEMEIEELEKKIWRDKQRLKRLKEMAKNGLGTRLLLKQQHDDFPEHSSKRTMYKAQDGILKYMSKTMERYKAQGFVYGIVLENGKTVAGSSDNLREWWKDKVRFDRNGPAAIIKHQRDINLSDGSDSGSEVGDSTAQKLLELQDTTLGALLSALFPHCNPPQRRFPLEKGVTPPWWPTGKEDWWDQLSLPVDFRGVPPPYKKPH 246          
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIL4_ARATH (Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=Arabidopsis thaliana GN=EIL4 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 1.885e-67
Identity = 123/218 (56.42%), Postives = 161/218 (73.85%), Query Frame = 2
Query:    5 VQPSEPEATVEDDYTDEEMDVDELERRMWKDK-MRIKRLKEQSRGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNSVPGKNEGINAIGPTP---HTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPKDQGAPPYKKPH 646
            V+  EP + ++D+  +EE+  D+L+RRMWKD+ +  K+LK+Q R    + ++      E +RRKKM+R+QD +LKYM+K+MEVCKA+GFVYGI+PEKGKP+TG+SD+LR WWK+ V+FD+N P AIT Y A  +     E I+    +    H LQELQDTTLGSLLSALMQHC PPQRRFPLEKG++PPWWPTG E WW + G   + GAPPY+KPH
Sbjct:    4 VEELEPLSPMDDE--EEEISYDDLKRRMWKDRNLMEKKLKQQKRHSNDV-VSFTTHRAEASRRKKMARSQDSVLKYMMKIMEVCKAKGFVYGIVPEKGKPITGSSDSLRRWWKENVQFDQNAPDAITDYLALAAAAAAAELIDKSSSSSSLLHMLQELQDTTLGSLLSALMQHCMPPQRRFPLEKGIAPPWWPTGTELWWGEQGAAHEHGAPPYRKPH 218          
BLAST of CN189646 vs. ExPASy Swiss-Prot
Match: EIL5_ARATH (ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidopsis thaliana GN=EIL5 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 1.308e-60
Identity = 124/245 (50.61%), Postives = 155/245 (63.27%), Query Frame = 2
Query:    5 VQPSEPEATVED-DYTDEEMDVDELER------------RMWKDKMRIKRLKEQSRGKEGIDMAKQRQSQ---------------EQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKY--QADNSVPGKNEGINAIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVSPPWWPTGKEEWWPQLGLPK-DQGAPPYKKPH 646
            VQ  EP + ++D D  D E DVDE ER            RMWKD+  + +LK+Q R      ++    S                E +RRKKM+R+QD +LKYM+K+MEVCKAQGFVYGI+PEKGKPVTG+SD+LR WWK+ V+FD+  P A++ Y   A   +   NE ++      H L ELQDTTLGSLLSALMQHC PPQRRFPLEKG++PPWWP G E WW + G    + G PPY+KPH
Sbjct:    4 VQDLEPLSPIQDYDEDDLEEDVDEFERFGEEISYDDLKKRMWKDRNLMCKLKQQKRDNLNSVISSPSSSTSASSSSSSSVIVRRTEASRRKKMARSQDSVLKYMMKIMEVCKAQGFVYGIVPEKGKPVTGSSDSLRRWWKENVQFDQTAPNAVSDYLTLAAAQLISSNESLDP-NSYIHMLHELQDTTLGSLLSALMQHCVPPQRRFPLEKGLAPPWWPNGTELWWGEQGAAAFEHGPPPYRKPH 247          
The following BLAST results are available for this feature:
BLAST of CN189646 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
EIN3_ARATH3.876e-11387.38Protein ETHYLENE INSENSITIVE 3 OS=Arabidopsis thal... [more]
EIL1_ARATH5.074e-10584.11ETHYLENE INSENSITIVE 3-like 1 protein OS=Arabidops... [more]
EIL3_ARATH9.972e-7765.05ETHYLENE INSENSITIVE 3-like 3 protein OS=Arabidops... [more]
EIL2_ARATH7.653e-6960.56ETHYLENE INSENSITIVE 3-like 2 protein OS=Arabidops... [more]
EIL4_ARATH1.885e-6756.42Putative ETHYLENE INSENSITIVE 3-like 4 protein OS=... [more]
EIL5_ARATH1.308e-6050.61ETHYLENE INSENSITIVE 3-like 5 protein OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002D05_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189646 ID=CN189646; Name=CN189646; organism=Citrus sinensis; type=EST; length=648bp
GAGGGTCCAACCATCTGAACCGGAGGCTACCGTGGAGGATGATTATACTG
ATGAAGAGATGGATGTTGATGAGCTTGAGAGGAGGATGTGGAAGGACAAA
ATGCGTATCAAACGGCTGAAAGAACAAAGCAGGGGCAAGGAGGGAATTGA
CATGGCCAAGCAGCGTCAGTCGCAAGAGCAGGCAAGGAGGAAGAAGATGT
CGAGGGCTCAAGATGGGATCTTGAAATACATGTTAAAAATGATGGAAGTT
TGTAAAGCTCAAGGTTTTGTCTATGGGATTATTCCAGAGAAAGGAAAGCC
TGTGACTGGGGCATCTGACAATCTCCGTGAGTGGTGGAAGGATAAGGTTA
GGTTTGATCGTAATGGTCCGGCTGCTATAACTAAGTACCAAGCTGATAAT
TCAGTCCCTGGCAAGAATGAGGGCATTAACGCAATTGGTCCAACCCCGCA
TACCTTGCAAGAGTTGCAAGACACCACCCTTGGTTCACTCTTGTCGGCTC
TCATGCAGCACTGTGATCCTCCTCAGAGGCGGTTTCCTCTGGAGAAGGGT
GTTTCCCCCCCATGGTGGCCCACTGGAAAAGAGGAATGGTGGCCGCAATT
GGGTTTGCCCAAGGATCAAGGTGCTCCACCTTACAAGAAGCCACATGA
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