CN189633

Overview
NameCN189633
Unique NameCN189633
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length748
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3618 contig Csv1_Contig3618:578..1326. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189633 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.273e-23
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = -1
Query:  215 VCGATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKG-LITIHISHTYSPSEANLAFSAIEDRKVIGKVMI 706
            V GA +I  +R  EK+  ++ +G    +D + E++   VKE        G +V+ + VGG + K+ LK + W   I+ +GFASGEIP IPANI LVKN +  GLYWG++  H P +L +S+ + L +   G L   +IS ++   + N AF  I  RK  GKV+I
Sbjct:  201 VFGAKVIGASR-KEKLVIVQEIGATATIDYTRENIKDKVKELTDGH---GANVIMEAVGGDVFKQCLKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPYISASFGLDKVNEAFQMILQRKSTGKVVI 361          
BLAST of CN189633 vs. ExPASy Swiss-Prot
Match: QORL2_RAT (Quinone oxidoreductase-like protein 2 OS=Rattus norvegicus PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 3.245e-19
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = -1
Query:  212 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 697
            A +IA A   EK K     G    V+ S  S+  +VK+ + +    GV+V  D VGG +  +SL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   L +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  190 AKVIAAAGSDEKCKLAMQRGAQSGVNYSQGSLKDAVKKLVGS---SGVNVAIDMVGGDVFLDSLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTALQYCQQGLIHPHTGAVFKLEKVNDAFLHVMQRKSTGKVLLS 348          
BLAST of CN189633 vs. ExPASy Swiss-Prot
Match: QORL2_BOVIN (Quinone oxidoreductase-like protein 2 OS=Bos taurus PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.228e-19
Identity = 57/162 (35.19%), Postives = 86/162 (53.09%), Query Frame = -1
Query:  212 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 697
            A +IA A   EK +     G    V+ S  S+  +V + + +    GV+V+ D VGG +  E+L+ L +  +I+V+GFA G I  +PAN+ L+KN +  GLYWG Y+     V   SL   L +  +G I  HI   +   E N AF  +  RK  GKV+++
Sbjct:  189 AKVIAAAGSDEKCQLAMQSGAQSSVNYSRGSLKEAVGKLVGSG---GVNVVIDMVGGDIFLEALRSLAYEGRIVVVGFAGGTIASVPANLLLLKNVSAMGLYWGRYRQQNFPVFSRSLSSALQYCQEGRIQPHIGEVFELEEVNDAFLHVTQRKSTGKVLLS 347          
BLAST of CN189633 vs. ExPASy Swiss-Prot
Match: QORL2_MOUSE (Quinone oxidoreductase-like protein 2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.747e-18
Identity = 56/162 (34.57%), Postives = 84/162 (51.85%), Query Frame = -1
Query:  212 ATIIAVARGAEKIKFLKSLGVDHVVDLSNESVIPSVKEFLKARKLKGVDVLYDPVGGKLTKESLKLLNWGAQILVIGFASGEIPVIPANIALVKNWTVHGLYWGSYKIHRPHVLEDSLRELLLWAAKGLITIHISHTYSPSEANLAFSAIEDRKVIGKVMIA 697
            A +IA     EK K     G    V+ S  S+  +VK+   +    GV+V  D VGG +  ESL+ L W  +I+V+GFA G I  +P+N+ L+KN +  GLYWG Y+     V   S+   + +  +GLI  H    +   + N AF  +  RK  GKV+++
Sbjct:  190 AKVIAATGSDEKCKLAVQRGAQFSVNYSQGSLRDAVKKLAGSG---GVNVAIDMVGGDVFLESLRSLAWEGRIVVLGFAGGNIASVPSNLLLLKNISAMGLYWGRYQHQDFAVFSKSMSTAMQYCQQGLIHPHTGAVFKLEKINDAFLHVMQRKSTGKVLLS 348          
The following BLAST results are available for this feature:
BLAST of CN189633 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
QORL2_NEMVE1.273e-2338.79Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORL2_RAT3.245e-1935.19Quinone oxidoreductase-like protein 2 OS=Rattus no... [more]
QORL2_BOVIN7.228e-1935.19Quinone oxidoreductase-like protein 2 OS=Bos tauru... [more]
QORL2_MOUSE2.747e-1834.57Quinone oxidoreductase-like protein 2 OS=Mus muscu... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C21_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189633 ID=CN189633; Name=CN189633; organism=Citrus sinensis; type=EST; length=748bp
CAATTTTGACACCTTAATTGCCAGGGACTTGCATTCTCATGCTTCCAACA
AAGTCATAGATTTTCTCTCATATAAGAGCAACTAAATGTGCCATGTATTA
ATTAAGGCTAATTTTGATGATCAAGAGCCGCAGAAACATTCTCCATTGCA
TACCAGCCCAGTAATGATGATCAACTTAAAGCCTAGGCCTGATACTTTTC
ATGTCATCAAAAGCAATCATCACCTTTCCAATTACTTTCCTATCTTCAAT
GGCAGAGAAGGCAAGGTTGGCCTCTGATGGACTGTAAGTATGAGAAATAT
GGATGGTAATCAAGCCCTTTGCAGCCCATAAGAGTAACTCCCTAAGAGAA
TCTTCAAGCACATGAGGTCGATGTATTTTATAGCTACCCCAGTAAAGTCC
GTGTACTGTCCAGTTCTTAACAAGAGCAATATTAGCAGGGATTACTGGAA
TCTCCCCACTTGCAAAGCCAATGACTAAGATTTGAGCACCCCAGTTCAAA
AGCTTCAAGGATTCTTTAGTAAGCTTGCCTCCAACAGGATCATACAGAAC
ATCAACCCCTTTGAGTTTCCTTGCCTTGAGGAACTCTTTGACACTCGGAA
TGACACTCTCATTGCTCAAGTCAACTACATGATCGACGCCCAATGACTTC
AAAAATTTTATCTTTTCAGCACCCCTAGCAACGGCAATGATAGTGGCTCC
GCAAACCTTGCCAATTTGAACAGCGGCAACACCAACACCTCCAGCAGC
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