CN189628

Overview
NameCN189628
Unique NameCN189628
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length770
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ANL2_ARATH (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.967e-76
Identity = 157/255 (61.57%), Postives = 180/255 (70.59%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 769
            LRQENDKLRAENMSIR+AMRNPICTNCGGPA++GD+SLEE HLRIENARLKDELDRVC L GKFLG               LEL VGT N  G  +       P DFG G    LP   P  +    + G+D   ++S+ LELAL AMDELVK+AQ++EPLW++S +G  R  LN +EY+RTF+     KP G  TEASR +GMVIINSLALVETLMD NRW EMFPC +AR  TTDVIS GM GT NGALQLM+
Sbjct:  201 LRQENDKLRAENMSIREAMRNPICTNCGGPAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKFLGH-----HHNHHYNSSLELAVGTNNNGGHFA------FPPDFGGG-GGCLP---PQQQQSTVINGID---QKSVLLELALTAMDELVKLAQSEEPLWVKSLDGE-RDELNQDEYMRTFS---STKPTGLATEASRTSGMVIINSLALVETLMDSNRWTEMFPCNVARATTTDVISGGMAGTINGALQLMN 433          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: HDG1_ARATH (Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana GN=HDG1 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.969e-75
Identity = 161/262 (61.45%), Postives = 189/262 (72.14%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTING---FGG---LSSTVTTTLPADFGTGISNALPVVMPPNRSGP-GVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 769
            LRQENDKLRAENMS+R+AMRNP+C NCGGPA+IG+IS+EEQHLRIEN+RLKDELDRVCAL GKFLGR              L LGVG  +G    GG   LSS +       F         +V   NR  P  V+  D   +RS +L+LALAAMDELVKMAQT EPLW+RS + SG +VLN EEY  +F+ C+G K +GFV+EAS+E G VIINSLALVETLMD  RWAEMFP M++RT+TT++ISSGMGG RNGAL LMH
Sbjct:  177 LRQENDKLRAENMSVREAMRNPMCGNCGGPAVIGEISMEEQHLRIENSRLKDELDRVCALTGKFLGR---SNGSHHIPDSALVLGVGVGSGGCNVGGGFTLSSPLLPQASPRFEISNGTGSGLVATVNRQQPVSVSDFD---QRSRYLDLALAAMDELVKMAQTREPLWVRSSD-SGFEVLNQEEYDTSFSRCVGPKQDGFVSEASKEAGTVIINSLALVETLMDSERWAEMFPSMVSRTSTTEIISSGMGG-RNGALHLMH 430          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC5_ORYSJ (Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp. japonica GN=ROC5 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 8.271e-74
Identity = 149/269 (55.39%), Postives = 193/269 (71.75%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---------XXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPA---DFGTGISNALPVVMPPNR-SGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGS-GRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            L+QENDKLRAENM+IR+AMR+P+C +CG PA++G++SLEEQHLRIENARLKDEL+RVCALA KFLG+                       LEL +G I G G L      TLP    +F  G+S+ +  V+ P R +G  +  L  +I+RS+FLELA++AMDELVKMAQ D+PLW+ +  GS  ++VLN EEYL +F PCIG+KP G+V+EASRE+G+VII NSLALVETLMD  RW++MF CMIA+    + +S+G+ G+RNGAL LM
Sbjct:  165 LKQENDKLRAENMTIREAMRSPMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGKPISLLSPPPLLQPHLSLPMPNSSLELAIGGIGGLGSLG-----TLPGCMNEFAGGVSSPMGTVITPARATGAAIPSLVGNIDRSVFLELAISAMDELVKMAQMDDPLWVPALPGSPSKEVLNFEEYLHSFLPCIGMKPAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNGALLLM 428          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2)

HSP 1 Score: 276.559 bits (706), Expect = 1.080e-73
Identity = 150/273 (54.95%), Postives = 192/273 (70.33%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR----XXXXXXXXXXXXXXLELGVGTINGFG----GLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLD----------RSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLMH 769
            LRQENDKLRAENM+IR+AMRNP+C +CGG A++G++SLEEQHLRIENARLKDELDRVCALAGKFLGR                  LELGVG+  GFG    G S+ + +      G+      PV     R   G+ GLD           +I+R++ LELALAAMDELVK+AQ DEPLW+ S +G G + LN++EY R F   +G  P G+V+EA+RE+G+ II+S+ LV++LMD  RW+EMFPC++AR +TTD+ISSGMGGTR+G++QLMH
Sbjct:  190 LRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKDELDRVCALAGKFLGRPISSISSPGPPSLQACSGLELGVGSNGGFGLGALGASAAMQSIPDLMGGSSGLTGGPVGSAAMRLPAGIGGLDGAMHAAAADGGAIDRAVLLELALAAMDELVKVAQMDEPLWLPSLDG-GFETLNYDEYHRAFARVVGQCPAGYVSEATRESGIAIISSVDLVDSLMDAPRWSEMFPCVVARASTTDIISSGMGGTRSGSIQLMH 461          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 9.793e-67
Identity = 134/262 (51.15%), Postives = 179/262 (68.32%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLP----ADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSF---EGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVII-NSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            L+QENDKLR+EN+SIR+A  N +C  CGGPA++G++SLEE HLR+ENARLKDEL RVCALA KFLG+                 G       GG+ S  + T+P     DF   +S+++  V+ P +S    + +   I++S+FLELA++AMDELVKMAQ  +PLWI          ++ LN EEYL TF PCIG+KP G+V+EASRE+G+VII +  ALVETLMD  RW++MF CMIA+ +TT+ IS+G+ G+RNGAL L+
Sbjct:  171 LKQENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAKFLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTITDFAGAMSSSMGTVITPMKSEAEPSAM-AGIDKSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAKESLNFEEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKASTTEEISTGVAGSRNGALLLV 431          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ATML1_ARATH (Homeobox-leucine zipper protein MERISTEM L1 OS=Arabidopsis thaliana GN=ATML1 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.421e-49
Identity = 113/262 (43.13%), Postives = 164/262 (62.60%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR--------XXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            L+ ENDKLRAEN   +DA+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+                      L+L VG    FG  +++ T  +   FG+  S+ L  V  P+ +           ++ M +ELA+AAM+ELV+MAQT +PLW+ S   +  ++LN EEY RTF   IG KP G  +EASRE+ +VI+N + L+E LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M
Sbjct:  129 LKSENDKLRAENNRYKDALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLMANSSSFPQLSSSHHIPSRSLDLEVG---NFGNNNNSHTGFVGEMFGS--SDILRSVSIPSEA-----------DKPMIVELAVAAMEELVRMAQTGDPLWVSS--DNSVEILNEEEYFRTFPRGIGPKPIGLRSEASRESTVVIMNHINLIEILMDVNQWSSVFCGIVSRALTLEVLSTGVAGNYNGALQVM 372          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: PDF2_ARATH (Homeobox-leucine zipper protein PROTODERMAL FACTOR 2 OS=Arabidopsis thaliana GN=PDF2 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 2.268e-47
Identity = 107/257 (41.63%), Postives = 159/257 (61.87%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGR---XXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            L+ +NDKLRAEN   ++A+ N  C NCGGPA IG++S +EQHLRIENARL++E+DR+ A+A K++G+                 L+L VG      G    +       +GTG  + L  V  P+ +           ++ + +ELA+AAM+ELV+MAQT +PLW+ +   +  ++LN EEY RTF   IG KP G  +EASR++ +VI+N + LVE LMD N+W+ +F  +++R  T +V+S+G+ G  NGALQ+M
Sbjct:  129 LKSDNDKLRAENNRYKEALSNATCPNCGGPAAIGEMSFDEQHLRIENARLREEIDRISAIAAKYVGKPLGSSFAPLAIHAPSRSLDLEVGNFGNQTGFVGEM-------YGTG--DILRSVSIPSET-----------DKPIIVELAVAAMEELVRMAQTGDPLWLST--DNSVEILNEEEYFRTFPRGIGPKPLGLRSEASRQSAVVIMNHINLVEILMDVNQWSCVFSGIVSRALTLEVLSTGVAGNYNGALQVM 363          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSJ (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. japonica GN=ROC7 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.962e-47
Identity = 108/262 (41.22%), Postives = 149/262 (56.87%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS--------GPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            LR EN+KLRAENM  ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+                                    PA     +S A P + P NRS        G G        ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K     +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGALQLM
Sbjct:  155 LRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK------------------------------------PA---AAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKSPELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLM 374          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSI (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica GN=ROC7 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 2.962e-47
Identity = 108/262 (41.22%), Postives = 149/262 (56.87%), Query Frame = 2
Query:    5 LRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRS--------GPGVTGLDRSIERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            LR EN+KLRAENM  ++A+ N  C NCGGPA IG++S +E HLR+ENARL+DE+DR+ A+A K++G+                                    PA     +S A P + P NRS        G G        ++ + +ELA+AAM+ELV+MAQ  EPLW  +  G   + L  EEY RTF   +G K     +EASRET +VI+N ++LVE LMD  +W  +F  +++R AT +V+S+G+ G  NGALQLM
Sbjct:  155 LRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDEIDRISAIAAKYVGK------------------------------------PA---AAVSAAYPPLPPSNRSPLDHMGIPGAGADVFGADFDKPLVIELAVAAMEELVRMAQLGEPLWAPALGG---EALGEEEYARTFPRGLGPKSPELRSEASRETAVVIMNHVSLVEMLMDVGQWTALFSSIVSRAATLEVLSTGVAGNHNGALQLM 374          
BLAST of CN189628 vs. ExPASy Swiss-Prot
Match: ROC1_ORYSJ (Homeobox-leucine zipper protein ROC1 OS=Oryza sativa subsp. japonica GN=ROC1 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 6.829e-44
Identity = 108/260 (41.54%), Postives = 152/260 (58.46%), Query Frame = 2
Query:    2 RLRQENDKLRAENMSIRDAMRNPICTNCGGPAIIGDISLEEQHLRIENARLKDELDRVCALAGKFLGRXXXXXXXXXXXXXXLELGVGTINGFGGLSSTVTTTLPADFGTGISNALPVVMPPNRSGPGVTGLDRSI-----ERSMFLELALAAMDELVKMAQTDEPLWIRSFEGSGRQVLNHEEYLRTFTPCIGLKPNGFVTEASRETGMVIINSLALVETLMDPNRWAEMFPCMIARTATTDVISSGMGGTRNGALQLM 766
            +LR ENDKLRAENM  ++A+ +  C NCGGPA +G++S +E HLR+ENARL+DE+DR+  +A K +G+                     I  F  LSS +     A     ++ A  VV P      G   L R +     ++ M +ELA+AAMDELV+MAQ DEPLW  S E +   +L+ EEY R F   +G K  G  +EASR   +VI+    LVE LMD N++A +F  +++R +T +V+S+G+ G  NGALQ+M
Sbjct:  172 QLRAENDKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRVENARLRDEIDRISGIAAKHVGKP-------------------PIVSFPVLSSPLAVA-AARSPLDLAGAYGVVTPGLDMFGGAGDLLRGVHPLDADKPMIVELAVAAMDELVQMAQLDEPLWSSSSEPAA-ALLDEEEYARMFPRGLGPKQYGLKSEASRHGAVVIMTHSNLVEILMDVNQFATVFSSIVSRASTHEVLSTGVAGNYNGALQVM 410          
The following BLAST results are available for this feature:
BLAST of CN189628 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ANL2_ARATH3.967e-7661.57Homeobox-leucine zipper protein ANTHOCYANINLESS 2 ... [more]
HDG1_ARATH1.969e-7561.45Homeobox-leucine zipper protein HDG1 OS=Arabidopsi... [more]
ROC5_ORYSJ8.271e-7455.39Homeobox-leucine zipper protein ROC5 OS=Oryza sati... [more]
ROC6_ORYSJ1.080e-7354.95Homeobox-leucine zipper protein ROC6 OS=Oryza sati... [more]
ROC4_ORYSJ9.793e-6751.15Homeobox-leucine zipper protein ROC4 OS=Oryza sati... [more]
ATML1_ARATH1.421e-4943.13Homeobox-leucine zipper protein MERISTEM L1 OS=Ara... [more]
PDF2_ARATH2.268e-4741.63Homeobox-leucine zipper protein PROTODERMAL FACTOR... [more]
ROC7_ORYSJ2.962e-4741.22Homeobox-leucine zipper protein ROC7 OS=Oryza sati... [more]
ROC7_ORYSI2.962e-4741.22Homeobox-leucine zipper protein ROC7 OS=Oryza sati... [more]
ROC1_ORYSJ6.829e-4441.54Homeobox-leucine zipper protein ROC1 OS=Oryza sati... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C18_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189628 ID=CN189628; Name=CN189628; organism=Citrus sinensis; type=EST; length=770bp
GAGGCTCAGGCAAGAAAACGACAAGCTTCGAGCTGAAAACATGTCCATTA
GAGATGCAATGAGAAACCCAATTTGCACCAACTGTGGCGGTCCTGCAATA
ATTGGTGATATTTCTCTTGAAGAGCAGCACTTGAGGATCGAAAATGCCCG
TTTAAAGGATGAGTTAGATCGAGTTTGTGCCCTTGCCGGCAAGTTTTTGG
GGCGACCAGTTTCTTCAATGGGTCCTCCTCCAATGCCAAACTCAAGTTTA
GAACTTGGTGTTGGTACCATTAATGGTTTTGGTGGTTTAAGCAGTACCGT
GACCACAACATTGCCTGCTGATTTTGGAACTGGGATTTCTAATGCCTTGC
CAGTTGTTATGCCTCCGAACAGATCAGGTCCCGGCGTTACAGGCCTCGAT
AGATCCATTGAAAGATCAATGTTTTTGGAGCTTGCTTTGGCTGCCATGGA
TGAATTGGTTAAAATGGCTCAAACTGATGAACCCCTTTGGATCAGAAGCT
TTGAAGGATCAGGAAGACAAGTGCTGAACCATGAAGAATACTTGAGAACT
TTCACTCCGTGCATTGGCTTGAAACCTAATGGCTTTGTCACGGAGGCTTC
TAGGGAGACTGGCATGGTCATCATCAACAGCTTGGCTCTTGTTGAAACTT
TGATGGACCCAAATCGATGGGCGGAGATGTTTCCTTGTATGATTGCCAGA
ACTGCAACAACTGATGTGATATCAAGTGGCATGGGAGGAACAAGGAATGG
GGCACTCCAGTTGATGCATG
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