CN189623

Overview
NameCN189623
Unique NameCN189623
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6215 contig Csv1_Contig6215:86..898. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_DICDI (Fumarylacetoacetate hydrolase domain-containing protein 1 homolog OS=Dictyostelium discoideum GN=fahd1 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.724e-70
Identity = 134/217 (61.75%), Postives = 162/217 (74.65%), Query Frame = 1
Query:   46 VQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL-LDVHFDIEKRRR 690
            + K  + G KIVAVGRNYA HAKELGN +P EP  FLKPTSSYL  G G IE+P     +HHEVEL +VIG+K RD+   +AMDYV GY +ALDMT+R+ QS AK+  LPWTV+KG DTF PIS  +PK  + D +N+ELW +VDG+I+QKG+T  MIF +P+LI +ISSIMTL  GD+ILTGTP GVGPVK GQ I  GITGL  D+ FDI  R+R
Sbjct:    1 MNKFWETGRKIVAVGRNYAQHAKELGNEIPSEPFFFLKPTSSYLLQGTGPIEIPLESSDIHHEVELGIVIGKKGRDIDLKSAMDYVSGYTLALDMTSRDQQSIAKAKSLPWTVSKGYDTFCPISGFIPKDKIKDLNNVELWCSVDGQIKQKGNTNQMIFDVPHLIQYISSIMTLESGDLILTGTPSGVGPVKPGQVIKCGITGLDTDMQFDIILRKR 217          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_BOVIN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Bos taurus GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 5.317e-66
Identity = 119/216 (55.09%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   34 ASSAVQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIEK 681
            AS  + +  + G  IV VGRNYA H +E+ +A P EPVLFLKP+++Y   G  + VP    +LHHE+ELAVV+G++ R V E  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPHNL+LWL V+GE+RQ+G T  MIF IPY+IS++S IMTL EGD+ILTGTP+GVGPVK   +I AGI G+L + F +E+
Sbjct:    3 ASRPLSRFWEWGKNIVCVGRNYADHVREMQSAAPSEPVLFLKPSTAYAPEGSPVLVPAYTRNLHHELELAVVMGKRCRAVSEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHNLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIMTLEEGDIILTGTPKGVGPVKENDEIQAGIHGVLSMKFKVER 218          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_PONAB (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Pongo abelii GN=FAHD1 PE=2 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.547e-65
Identity = 119/216 (55.09%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   34 ASSAVQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIEK 681
            AS  + +  + G  IV VGRNYA H +E+ +AV  EPVLFLKP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI GL+ + F +EK
Sbjct:    6 ASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGRRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMRFKVEK 221          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_HUMAN (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Homo sapiens GN=FAHD1 PE=1 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 2.639e-65
Identity = 119/216 (55.09%), Postives = 156/216 (72.22%), Query Frame = 1
Query:   34 ASSAVQKLIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIEK 681
            AS  + +  + G  IV VGRNYA H +E+ +AV  EPVLFLKP+++Y   G  I +P    +LHHE+EL VV+G++ R VPE  AMDYVGGYA+ LDMTAR++Q   K  GLPWT+AK      P+S+ +PK  +PDPH L+LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI GL+ + F +EK
Sbjct:    6 ASRPLSRFWEWGKNIVCVGRNYADHVREMRSAVLSEPVLFLKPSTAYAPEGSPILMPAYTRNLHHELELGVVMGKRCRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFVPKEKIPDPHKLKLWLKVNGELRQEGETSSMIFSIPYIISYVSKIITLEEGDIILTGTPKGVGPVKENDEIEAGIHGLVSMTFKVEK 221          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_MOUSE (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Mus musculus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 6.083e-62
Identity = 110/205 (53.66%), Postives = 148/205 (72.20%), Query Frame = 1
Query:   67 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIEK 681
            G  IV VGRNYA H KE+ + V  EPVLFLKP+++Y   G  + +P    +LHHEVEL V++G++   +PE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVGPVK   +I AGI G++ + F +++
Sbjct:   20 GKNIVCVGRNYADHVKEMRSTVLSEPVLFLKPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGKRGEAIPEAAAMDYVAGYALCLDMTARDVQEECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVGPVKENDEIEAGIDGVVSMRFKVKR 224          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: FAHD1_RAT (Fumarylacetoacetate hydrolase domain-containing protein 1 OS=Rattus norvegicus GN=Fahd1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 1.038e-61
Identity = 111/207 (53.62%), Postives = 148/207 (71.50%), Query Frame = 1
Query:   67 GTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIEKRR 687
            G  IV VGRNYA H KE+ + V  EPVLFLKP+++Y   G  + +P    +LHHEVEL V++G++   VPE  AMDYV GYA+ LDMTAR++Q   K  GLPWT+AK   +  P+S+ +PK  +PDPH L LWL V+GE+RQ+G T  MIF IPY+IS++S I+TL EGD+ILTGTP+GVG VK   +I AGI G++ + F +E+ +
Sbjct:   14 GKNIVCVGRNYADHVKEMRSTVLSEPVLFLKPSTAYAPEGSPVLMPAYCRNLHHEVELGVLLGRRGEAVPEAAAMDYVAGYALCLDMTARDVQDECKKKGLPWTLAKSFTSSCPVSAFVPKEKIPDPHALRLWLKVNGELRQEGKTSSMIFSIPYIISYVSKIITLEEGDLILTGTPKGVGAVKENDEIEAGIDGVVSMRFKVERSK 220          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: Y643_PYRHO (Uncharacterized protein PH0643 OS=Pyrococcus horikoshii GN=PH0643 PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.575e-54
Identity = 102/202 (50.50%), Postives = 144/202 (71.29%), Query Frame = 1
Query:   70 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDI 675
            TKIVA+ +NYA HA+E+G+  P+EP++FLKP S+ +G G +I +P     + HEVELAV++G++A++VP + A DY+ GY + LD+TAR++Q+ A+  G PWT++KG DTF PI   +  S   DP +LE+ L V+G+IRQ G T  MIF IP LI +IS IMTL  GD+I TGTP GVGP++ G +I A I G+  + FD+
Sbjct:   21 TKIVALAKNYAEHAREMGSEPPEEPIIFLKPPSALIGPGSSIILPRRSKRVDHEVELAVIMGKRAKNVPASKAFDYILGYTIILDITARDLQAEARKKGYPWTISKGFDTFAPIGPRVVDSRELDPSDLEIGLKVNGKIRQLGRTSQMIFKIPELIEYISHIMTLEPGDIIATGTPPGVGPLRHGDRIEAWIEGIGKMEFDV 222          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: Y1397_PYRAB (Uncharacterized protein PYRAB13970 OS=Pyrococcus abyssi GN=PYRAB13970 PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 5.162e-53
Identity = 100/195 (51.28%), Postives = 138/195 (70.77%), Query Frame = 1
Query:   70 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGL 654
            TKI+A+ +NYA HA+E+G+  P+EPV+FLKP S+ +G    I +P     + HEVELAV+IG++A++VP   A DY+ GY + LD+TAR++Q+ A+  G PWTV+KG DTF PI   +      DP +LE+ L V+G++RQ G T +MIF IP LI +ISSIMTL  GD+I TGTP GVGP++ G KI A + G+
Sbjct:   16 TKIIALAKNYAEHAREMGSEPPEEPVIFLKPPSALIGPNSVIVLPRRSKRVDHEVELAVIIGKRAKNVPAEKAFDYILGYTILLDITARDLQAEARKKGYPWTVSKGFDTFAPIGPRIVDKRELDPSDLEIGLKVNGKVRQLGRTSEMIFKIPELIEYISSIMTLEPGDIIATGTPPGVGPLRHGDKIEAWVEGI 210          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: YO23_CAEEL (Uncharacterized protein ZK688.3 OS=Caenorhabditis elegans GN=ZK688.3 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.190e-49
Identity = 99/203 (48.77%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   70 TKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNGGTIEVPHPLDSLHHEVELAVVIGQKARDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITAGITGLLDVHFDIE 678
            TKIV VGRNY  HA ELGNA+PK+P+LF+K  +S++  G  I  P    +LH EVEL VVI +KA  + ++ AMDY+GGY VALDMTAR+ Q  AK AG PW +AK  D   PI   LP S +P+PH++EL+  ++G+ +Q+  T  MIF IP L+ + +   TL  GDV+LTGTP GV  +  G  I  G+T  L+  F+++
Sbjct:   12 TKIVCVGRNYKDHALELGNAIPKKPMLFVKTVNSFIVEGEPIVAPPGCQNLHQEVELGVVISKKASRISKSDAMDYIGGYTVALDMTARDFQDEAKKAGAPWFLAKSFDGSCPIGGFLPVSDIPNPHDVELFCKINGKDQQRCRTDVMIFDIPTLLEYTTQFFTLEVGDVVLTGTPAGVTKINSGDVIEFGLTDKLNSKFNVQ 214          
BLAST of CN189623 vs. ExPASy Swiss-Prot
Match: YOS9_SCHPO (Uncharacterized hydrolase C21C3.09c OS=Schizosaccharomyces pombe GN=SPBC21C3.09c PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.568e-44
Identity = 94/199 (47.24%), Postives = 133/199 (66.83%), Query Frame = 1
Query:   55 LIQAGTKIVAVGRNYAAHAKELGNAVPKEPVLFLKPTSSYLGNG-GTIEVPHPLDSLHHEVELAVVIGQKA---RDVPETTAMDYVGGYAVALDMTAREIQSSAKSAGLPWTVAKGQDTFTPISSVLPKSAVPDPHNLELWLTVDGEIRQKGSTKDMIFMIPYLISHISSIMTLFEGDVILTGTPQGVGPVKVGQKITA 639
            L +AG K+V +GRNYAAH +EL N  P +P  FLKPTS+ +  G G + +P P  S H+EVEL +++  +    R V   + +D +G Y V +DMTAR IQ+ AK  GLPW+ AKG DTF P+  ++PK  +PDPHN+ L L+++G++ QK ST  M+  IP + S I+  M+L  GD++LTGTP+GVGPV  G  ++A
Sbjct:    2 LSRAG-KVVCIGRNYAAHIRELNNPFPTKPFFFLKPTSAIVEPGHGNLIIP-PDVSAHYEVELGLIMKDRLPARRPVSSNSWLDSIGAYFVGIDMTARNIQNEAKKKGLPWSFAKGYDTFLPVGPIIPKHLIPDPHNVILELSLNGKVVQKDSTSLMLNKIPKIFSSITEAMSLNPGDLVLTGTPKGVGPVVPGDILSA 198          
The following BLAST results are available for this feature:
BLAST of CN189623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
FAHD1_DICDI2.724e-7061.75Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_BOVIN5.317e-6655.09Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_PONAB1.547e-6555.09Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_HUMAN2.639e-6555.09Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_MOUSE6.083e-6253.66Fumarylacetoacetate hydrolase domain-containing pr... [more]
FAHD1_RAT1.038e-6153.62Fumarylacetoacetate hydrolase domain-containing pr... [more]
Y643_PYRHO3.575e-5450.50Uncharacterized protein PH0643 OS=Pyrococcus horik... [more]
Y1397_PYRAB5.162e-5351.28Uncharacterized protein PYRAB13970 OS=Pyrococcus a... [more]
YO23_CAEEL1.190e-4948.77Uncharacterized protein ZK688.3 OS=Caenorhabditis ... [more]
YOS9_SCHPO2.568e-4447.24Uncharacterized hydrolase C21C3.09c OS=Schizosacch... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189623 ID=CN189623; Name=CN189623; organism=Citrus sinensis; type=EST; length=813bp
CCCCAGATCAGAATCGCTTAAGCGATGGCGACTGCATCATCGGCCGTACA
AAAGCTCATTCAAGCAGGCACCAAGATCGTGGCCGTTGGCCGTAACTATG
CGGCTCACGCCAAAGAGCTCGGCAACGCCGTGCCCAAGGAGCCGGTTTTG
TTTCTCAAACCGACGTCGTCTTATTTAGGAAACGGAGGGACCATCGAGGT
ACCTCATCCCCTGGATTCGCTTCATCATGAAGTGGAGCTTGCAGTCGTGA
TCGGACAGAAAGCTCGAGATGTGCCTGAAACCACTGCCATGGACTATGTT
GGAGGCTATGCAGTGGCGCTTGATATGACTGCAAGGGAAATCCAATCTTC
TGCCAAGTCTGCAGGTCTTCCGTGGACAGTGGCTAAAGGGCAGGACACCT
TCACACCAATTAGCTCTGTCCTACCAAAGTCAGCAGTGCCTGACCCTCAC
AACTTGGAACTATGGTTAACGGTTGATGGAGAGATTCGACAGAAAGGCTC
CACTAAGGATATGATTTTTATGATACCATATCTAATTAGCCACATAAGTT
CAATTATGACACTTTTTGAAGGAGATGTCATATTAACAGGCACTCCACAG
GGCGTTGGTCCTGTAAAAGTTGGTCAAAAGATAACAGCTGGTATAACGGG
CCTCCTGGATGTACACTTTGATATTGAAAAACGCCGAAGGCCAGGAAGTG
CTTGAACTTATGATGTCCACTCCACTGCAACTGCATTTCAAGCAAAATGT
ACACAAAATTTTCGAGGTGACCCTGACTCATAGCCCTAGCCCCATTTGGC
CATTGCCATCCCC
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