CN189611

Overview
NameCN189611
Unique NameCN189611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length692
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN189611_ssr128 microsatellite CN189611_ssr128:128..143. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT31_ARATH (Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.528e-65
Identity = 121/172 (70.35%), Postives = 141/172 (81.98%), Query Frame = 1
Query:  157 GNADYVYPSSKENVENAHR-VAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            G  DY +P   E +   H  V  P PQPF  SL+Y++KET FPDDP R FKN+ AS+KF+LGL+Y  PIFEWAPRY+ +F K+DLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYA++GSS+DLAVGTVAVASLL  + L +EV+  ++PKLYLHLAFTATFF
Sbjct:    2 GTEDYTFPQGAEELHRRHHTVEAPQPQPFLKSLQYSVKETLFPDDPFRQFKNQNASRKFVLGLKYFLPIFEWAPRYNLKFFKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAVLGSSRDLAVGTVAVASLLTGAMLSKEVDAEKDPKLYLHLAFTATFF 173          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT32_ARATH (Sulfate transporter 3.2 OS=Arabidopsis thaliana GN=SULTR3;2 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 8.979e-58
Identity = 115/163 (70.55%), Postives = 130/163 (79.75%), Query Frame = 1
Query:  184 SKENVENAHRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKP-ASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            S +     H+V IPPPQPF  SLK  L E  F DDP R  +N+   SKK  LGL++VFPI EWA  YS ++LK+D+I+GITIASLAIPQGISYA+LANLPPILGLYSS VPPLVYAIMGSS+DLAVGTVAVASLL A+ LG+EVN   NPKLYLHLAFTATFF
Sbjct:    2 SSKRASQYHQVEIPPPQPFLKSLKNTLNEILFADDPFRRIRNESKTSKKIELGLRHVFPILEWARGYSLEYLKSDVISGITIASLAIPQGISYAQLANLPPILGLYSSLVPPLVYAIMGSSRDLAVGTVAVASLLTAAMLGKEVNAVVNPKLYLHLAFTATFF 164          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT33_ARATH (Probable sulfate transporter 3.3 OS=Arabidopsis thaliana GN=SULTR3;3 PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 2.590e-52
Identity = 97/160 (60.62%), Postives = 124/160 (77.50%), Query Frame = 1
Query:  208 HRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            H+V  PP +     LK  LKETFFPDDPLR F+ +P   K I   QY+FPI +W P YSF  LK+D+++G+TIASLAIPQGISYAKLANLPPI+GLYSSFVPPLVYA++GSS+DLAVG V++ASL++ S L Q+V+  ++P L+L LAF++TFF   F +
Sbjct:    4 HKVVAPPHKSTVAKLKTKLKETFFPDDPLRQFRGQPNRTKLIRAAQYIFPILQWCPEYSFSLLKSDVVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLILGSMLRQQVSPVDDPVLFLQLAFSSTFFAGLFQA 163          

HSP 2 Score: 20.7866 bits (42), Expect = 2.590e-52
Identity = 8/9 (88.89%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  665 FFAGVFQAS 691
            FFAG+FQAS
Sbjct:  156 FFAGLFQAS 164          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT12_ARATH (Sulfate transporter 1.2 OS=Arabidopsis thaliana GN=SULTR1;2 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.891e-50
Identity = 96/154 (62.34%), Postives = 116/154 (75.32%), Query Frame = 1
Query:  208 HRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            H+V IPP Q  F    Y  KETFF DDPLR FK++P SK+F+LGLQ VFP+F+W   Y+F+  + DLI+G+TIASL IPQ I YAKLANL P  GLYSSFVPPLVYA MGSS+D+A+G VAV SLL+ + L  E++ N +P  YL LAFTATFF
Sbjct:   28 HKVGIPPKQNMFKDFMYTFKETFFHDDPLRDFKDQPKSKQFMLGLQSVFPVFDWGRNYTFKKFRGDLISGLTIASLCIPQDIGYAKLANLDPKYGLYSSFVPPLVYACMGSSRDIAIGPVAVVSLLLGTLLRAEIDPNTSPDEYLRLAFTATFF 181          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT13_ARATH (Sulfate transporter 1.3 OS=Arabidopsis thaliana GN=SULTR1;3 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.175e-49
Identity = 100/175 (57.14%), Postives = 121/175 (69.14%), Query Frame = 1
Query:  151 DKGNADYVYPSS--KENVENAHRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            D G    V  SS  + N    H+V +PP Q  FN   Y  KETFF DDPLR FK++  SKK +LG+Q VFP+ EW  +Y+ +  + DLIAG+TIASL IPQ I YAKLA+L P  GLYSSFVPPLVYA MGSSKD+A+G VAV SLL+ + L  E++ N NP  YL LAFT+TFF
Sbjct:   10 DDGEISPVERSSPRQANTPYVHKVEVPPKQNLFNEFMYTFKETFFHDDPLRHFKDQSKSKKLMLGIQSVFPVIEWGRKYNLKLFRGDLIAGLTIASLCIPQDIGYAKLASLDPKYGLYSSFVPPLVYACMGSSKDIAIGPVAVVSLLLGTLLRAEIDPNTNPNEYLRLAFTSTFF 184          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT34_ARATH (Probable sulfate transporter 3.4 OS=Arabidopsis thaliana GN=SULTR3;4 PE=2 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 7.347e-49
Identity = 92/166 (55.42%), Postives = 123/166 (74.10%), Query Frame = 1
Query:  190 ENVENAHRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            E V   H V +PP +  F  LK  + + FFPDDPL+ F+N+    + ILGLQ +FPIF W  +Y  + L++D+I+G+TIASLAIPQGISYAKLANLPPI+GLYSSFVPPL+YA++GSS+ LAVG V++ASL++ S L + V+  ++  LYL LAFT+TFF   F +
Sbjct:   21 ETVVEIHSVCLPPKKTAFQKLKKRVGDVFFPDDPLQRFRNQTWRNRVILGLQSLFPIFTWGSQYDLKLLRSDVISGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRHLAVGPVSIASLVMGSMLSESVSPTQDSILYLKLAFTSTFFAGVFQA 186          

HSP 2 Score: 21.9422 bits (45), Expect = 7.347e-49
Identity = 9/9 (100.00%), Postives = 9/9 (100.00%), Query Frame = 2
Query:  665 FFAGVFQAS 691
            FFAGVFQAS
Sbjct:  179 FFAGVFQAS 187          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT2_STYHA (High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.487e-44
Identity = 87/154 (56.49%), Postives = 109/154 (70.78%), Query Frame = 1
Query:  208 HRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            H+V  PP Q  F  +K++  ETFFPD P   FK++  S+KF+LGLQY+FPI EW   Y  +  + D IAG+TIASL IPQ ++YAKLANL P  GLYSSFV PLVYA MG+S+D+A+G VAV SLL+ + L  E++ N     YL LAFTATFF
Sbjct:   39 HKVGAPPKQTLFQEIKHSFNETFFPDKPFGNFKDQSGSRKFVLGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEIS-NTKSHDYLRLAFTATFF 191          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT1_STYHA (High affinity sulfate transporter 1 OS=Stylosanthes hamata GN=ST1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.392e-42
Identity = 85/154 (55.19%), Postives = 106/154 (68.83%), Query Frame = 1
Query:  208 HRVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFF 669
            H+V  PP Q  F  +K++  ETFFPD P   FK++   +K  LGLQY+FPI EW   Y  +  + D IAG+TIASL IPQ ++YAKLANL P  GLYSSFV PLVYA MG+S+D+A+G VAV SLL+ + L  E++ N     YL LAFTATFF
Sbjct:   42 HKVGTPPKQTLFQEIKHSFNETFFPDKPFGKFKDQSGFRKLELGLQYIFPILEWGRHYDLKKFRGDFIAGLTIASLCIPQDLAYAKLANLDPWYGLYSSFVAPLVYAFMGTSRDIAIGPVAVVSLLLGTLLSNEIS-NTKSHDYLRLAFTATFF 194          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT35_ARATH (Probable sulfate transporter 3.5 OS=Arabidopsis thaliana GN=SULTR3;5 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.818e-42
Identity = 91/155 (58.71%), Postives = 109/155 (70.32%), Query Frame = 1
Query:  229 PQPFFNSLKYNLKETFFPDDPLRLFKNKP----ASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCF 681
            P+ F +  K   KETFFPDDP +    +P     +KK    L+Y  PIFEW P+Y  Q LK D++AGITI SLA+PQGISYAKLA++PPI+GLYSSFVPP VYA+ GSS +LAVGTVA  SLLIA   G+E+  NE P+LYLHL FTAT     F
Sbjct:   22 PRGFGSKFKSKCKETFFPDDPFKPISQEPNRLLKTKKL---LEYFVPIFEWLPKYDMQKLKYDVLAGITITSLAVPQGISYAKLASIPPIIGLYSSFVPPFVYAVFGSSNNLAVGTVAACSLLIAETFGEEMIKNE-PELYLHLIFTATLITGLF 172          
BLAST of CN189611 vs. ExPASy Swiss-Prot
Match: SUT11_ARATH (Sulfate transporter 1.1 OS=Arabidopsis thaliana GN=SULTR1;1 PE=2 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 9.974e-41
Identity = 85/159 (53.46%), Postives = 108/159 (67.92%), Query Frame = 1
Query:  211 RVAIPPPQPFFNSLKYNLKETFFPDDPLRLFKNKPASKKFILGLQYVFPIFEWAPRYSFQFLKADLIAGITIASLAIPQGISYAKLANLPPILGLYSSFVPPLVYAIMGSSKDLAVGTVAVASLLIASFLGQEVNYNENPKLYLHLAFTATFFCWCFSS 687
            RV  PP       +K  ++ETFF D PLR FK +  +KK +LG+Q VFPI  WA  Y+ +  + DLIAG+TIASL IPQ I YAKLAN+ P  GLYSSFVPPL+YA MGSS+D+A+G VAV SLL+ +     ++  +NP+ YL L FTATFF   F +
Sbjct:   24 RVLAPPKAGLLKDIKSVVEETFFHDAPLRDFKGQTPAKKALLGIQAVFPIIGWAREYTLRKFRGDLIAGLTIASLCIPQDIGYAKLANVDPKYGLYSSFVPPLIYAGMGSSRDIAIGPVAVVSLLVGTLCQAVIDPKKNPEDYLRLVFTATFFAGIFQA 182          
The following BLAST results are available for this feature:
BLAST of CN189611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
SUT31_ARATH1.528e-6570.35Sulfate transporter 3.1 OS=Arabidopsis thaliana GN... [more]
SUT32_ARATH8.979e-5870.55Sulfate transporter 3.2 OS=Arabidopsis thaliana GN... [more]
SUT33_ARATH2.590e-5260.63Probable sulfate transporter 3.3 OS=Arabidopsis th... [more]
SUT12_ARATH6.891e-5062.34Sulfate transporter 1.2 OS=Arabidopsis thaliana GN... [more]
SUT13_ARATH1.175e-4957.14Sulfate transporter 1.3 OS=Arabidopsis thaliana GN... [more]
SUT34_ARATH7.347e-4955.42Probable sulfate transporter 3.4 OS=Arabidopsis th... [more]
SUT2_STYHA1.487e-4456.49High affinity sulfate transporter 2 OS=Stylosanthe... [more]
SUT1_STYHA1.392e-4255.19High affinity sulfate transporter 1 OS=Stylosanthe... [more]
SUT35_ARATH1.818e-4258.71Probable sulfate transporter 3.5 OS=Arabidopsis th... [more]
SUT11_ARATH9.974e-4153.46Sulfate transporter 1.1 OS=Arabidopsis thaliana GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0002C08_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0002C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189611 ID=CN189611; Name=CN189611; organism=Citrus sinensis; type=EST; length=692bp
GAGGCTCCGAATTCAGCGTAGCCACTCCTATAACACTGCGCATATCTTTT
GCATTTAGCTCAACCCAAATACGTTCTCCGATATAAAACGCAGCCGCTGC
ATTTTATTCTCTCTATCTTGCATTTAGTTAATTAATTAATTAACTACATG
GATAAGGGTAACGCAGACTACGTGTATCCATCGTCTAAAGAAAATGTGGA
GAATGCACATCGTGTTGCGATTCCCCCACCGCAGCCATTTTTCAATTCAC
TGAAGTATAATCTTAAAGAGACGTTCTTCCCTGATGATCCGCTCAGGCTA
TTCAAGAACAAGCCGGCATCTAAGAAGTTCATATTAGGCCTTCAGTATGT
GTTTCCCATTTTTGAATGGGCTCCGCGTTACAGCTTTCAGTTCTTGAAAG
CTGACCTTATTGCTGGGATCACCATTGCAAGTCTCGCAATTCCTCAGGGG
ATTAGTTATGCGAAGCTGGCGAACTTGCCCCCAATTCTTGGCCTATATTC
AAGCTTTGTTCCGCCATTGGTTTATGCTATCATGGGGAGCTCCAAAGATT
TGGCAGTTGGAACGGTGGCTGTCGCCTCACTTCTCATAGCTTCATTCTTG
GGGCAAGAAGTTAATTATAATGAGAACCCTAAGCTATATCTTCATCTTGC
TTTCACTGCAACATTTTTTTGCTGGTGTTTTTCAAGCTTCCT
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