CN189610
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189610 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.324e-18 Identity = 52/127 (40.94%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 7 LPIILHFHGGGFCVNQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARACDADLSPLRVAGAIPIHP 384 +P+I+ FHGG F + A+ +Y + +L A+ VSV RRAPE+R P A+DDG+ L W+ S ++WL D + R+FL GDSSGGN+VH VA RA + S + V G I ++P Sbjct: 104 VPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS----------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVE---SRIDVLGNILLNP 217
BLAST of CN189610 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.132e-17 Identity = 46/109 (42.20%), Postives = 59/109 (54.13%), Query Frame = 1 Query: 10 PIILHFHGGGFCVNQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARACD 336 P+I+ FHGG F + A +Y + + K + VSV RRAPEHR P A+DDG+ AL W+ S ++ RVFL GDSSGGN+ H VA RA D Sbjct: 114 PVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMSQPFMRSGGDAQ---------ARVFLSGDSSGGNIAHHVAVRAAD 213
BLAST of CN189610 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 9.132e-17 Identity = 48/126 (38.10%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 7 LPIILHFHGGGFCVNQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQRVFLIGDSSGGNVVHEVAARACDADLSPLRVAGAIPIHP 384 +P+++ FHGG F + A+ +Y +L + VSV RR+PEHR P A+DDG+ AL W++S Q+ N + V+L GDSSGGN+ H VA RA + ++V G I +HP Sbjct: 106 VPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRVWLQSGKDSNVY---------VYLAGDSSGGNIAHNVAVRATN---EGVKVLGNILLHP 219
BLAST of CN189610 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 7.730e-16 Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 1 Query: 7 LPIILHFHGGGFCVNQADWYMYYHVYTKLAKSVPAICVSVYLRRAPEHRLPAAFDDGFEALLWLRSLSLAQAQARENNWLTEHVDFQ-RVFLIGDSSGGNVVHEVAARACDADLSPLRVAGAIPIHP 384 +P+IL FHGG F + A+ +Y + +L + VSV RRAPE+ P A+DDG+ AL W+ S S WL D + +FL GDSSGGN+ H VA RA + S + V G I ++P Sbjct: 106 VPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNSRS----------WLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGE---SGIDVLGNILLNP 219 The following BLAST results are available for this feature:
BLAST of CN189610 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189610 ID=CN189610; Name=CN189610; organism=Citrus sinensis; type=EST; length=388bpback to top |